Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBF

Gene Name Gene ID Reads Annotation
RBF RBF 49711











Genes with expression patterns similar to RBF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBF RBF 49711 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 -
2. EXOC7 ENSGALG00000002050 9612 1.697 - - - - - - 0.893 0.804 - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
3. THOC7 ENSGALG00000007299 38227 1.639 0.786 - - - - - 0.853 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
4. RPS24 ENSGALG00000004871 173117 1.51 0.783 0.727 - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
5. PPA1 ENSGALG00000004442 33355 0.939 - - - - - - 0.939 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
6. COX7A2 ENSGALG00000015906 62347 0.928 - - - - - - 0.928 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
7. SEC31A ENSGALG00000040484 20190 0.928 - - - - - - 0.928 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
8. ENSGALG00000007096 ENSGALG00000007096 14595 0.916 - - - - - - 0.916 - - -
9. EPRS ENSGALG00000009598 26412 0.913 - - - - - - 0.913 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
10. NDUFB6 ENSGALG00000002033 45494 0.911 - - - - - - 0.911 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
11. NUDC ENSGALG00000000895 17844 0.907 - - - - - - 0.907 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
12. CHDZ CHDZ 10381 0.905 - - - - - - 0.905 - - -
13. SPTAN1 ENSGALG00000004719 20251 0.9 - - - - - - 0.900 - - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
14. PDCD11 ENSGALG00000008265 8665 0.899 - - - - - - 0.899 - - - programmed cell death 11, transcript variant X2
15. RPL22L1 ENSGALG00000009312 59030 0.896 - - - - - - 0.896 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
16. PAFAH1B1 ENSGALG00000005834 23532 0.896 - - - - - - 0.896 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
17. WDR36 ENSGALG00000000247 11277 0.895 - - - - - - 0.895 - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
18. ENSGALG00000028938 ENSGALG00000028938 18616 0.891 - - - - - - 0.891 - - -
19. RWDD1 ENSGALG00000014953 9986 0.889 - - - - - - 0.889 - - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
20. MFAP3 ENSGALG00000004040 6951 0.883 - - - - - - 0.883 - - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
21. SKA2 ENSGALG00000005090 24296 0.879 - - - - - - 0.879 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
22. LGMN ENSGALG00000010811 7401 0.879 - - - - - - 0.879 - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
23. ACAT2 ENSGALG00000011659 12825 0.878 - - - - - - 0.878 - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
24. ACO1 ENSGALG00000002162 6645 0.874 - - - - - - 0.874 - - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
25. FH ENSGALG00000013165 13669 0.872 - - - - - - 0.872 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
26. IST1 ENSGALG00000000811 10527 0.871 - - - - - - 0.871 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
27. PPP4R2 ENSGALG00000007810 15127 0.87 - - - - - - 0.870 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
28. ZRANB2 ENSGALG00000011340 18994 0.869 - - - - - - 0.869 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
29. ACP1 ENSGALG00000016363 10636 0.865 - - - - - - 0.865 - - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
30. MRTO4 ENSGALG00000003991 13642 0.865 - - - - - - 0.865 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
31. DAK DAK 13208 0.864 - - - - - - 0.864 - - -
32. ODC1 ENSGALG00000016444 20119 0.864 - - - - - - 0.864 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
33. MRPS33 ENSGALG00000028879 17966 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
34. SPRED1 ENSGALG00000028203 6520 0.863 - - - - - - 0.863 - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
35. HAT1 ENSGALG00000009525 24864 0.862 - - - - - - 0.862 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
36. FNDC3AL ENSGALG00000004169 4980 0.862 - - - - - - 0.862 - - - fibronectin type III domain containing 3A-like, transcript variant X3
37. TBCA ENSGALG00000004353 18510 0.861 - - - - - - 0.861 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
38. CHCHD4 ENSGALG00000006328 5860 0.86 - - - - - - 0.860 - - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
39. NLK ENSGALG00000005699 9066 0.858 - - - - - - 0.858 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
40. RSU1 ENSGALG00000040891 12561 0.858 - - - - - - 0.858 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
41. RBM25 ENSGALG00000009332 10842 0.857 - - - - - - 0.857 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
42. PSMA1 ENSGALG00000006022 26724 0.857 - - - - - - 0.857 - - - proteasome subunit alpha 1 [Source:NCBI gene;Acc:395874]
43. BIRC5 ENSGALG00000008713 46856 0.856 - - - - - - 0.856 - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
44. PAIP2 11856 0.856 - - - - - - 0.856 - - - poly(A) binding protein interacting protein 2, transcript variant X1
45. ARL5B ENSGALG00000008557 12887 0.855 - - - - - - 0.855 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
46. RPL36 ENSGALG00000000474 237707 0.854 0.854 - - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
47. ADD3 ENSGALG00000008542 13814 0.852 - - - - - - 0.852 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
48. PLOD1 ENSGALG00000004531 8256 0.851 - - - - - - 0.851 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
49. PDCD5 ENSGALG00000004648 22576 0.851 - - - - - - 0.851 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
50. ENSGALG00000000508 ENSGALG00000000508 19203 0.85 - - - - - - 0.850 - - -
51. OLA1 ENSGALG00000009325 26414 0.849 - - - - - - 0.849 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
52. RAB5A ENSGALG00000011272 17767 0.849 - - - - - - 0.849 - - - RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]
53. ATP6V1D ENSGALG00000009570 9827 0.847 - - - - - - 0.847 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
54. ASB3 ENSGALG00000008176 5422 0.846 - - - - - - 0.846 - - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
55. RPL27 ENSGALG00000002837 302752 0.845 0.845 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
56. BDH1_1 ENSGALG00000023601 6109 0.845 - - - - - - 0.845 - - - 3-hydroxybutyrate dehydrogenase, type 1
57. COPB1 ENSGALG00000006015 16518 0.842 - - - - - - 0.842 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
58. MRPS6 ENSGALG00000027579 8225 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
59. MRPS10 ENSGALG00000009890 9157 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
60. AIMP1 ENSGALG00000010553 17994 0.841 - - - - - - 0.841 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
61. ACTL6A ENSGALG00000009061 13013 0.838 - - - - - - 0.838 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
62. FUBP3 ENSGALG00000003941 12667 0.837 - - - - - - 0.837 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
63. EXOSC2 ENSGALG00000040373 24275 0.836 - - - - - - 0.836 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
64. WDR5 ENSGALG00000002659 13008 0.834 - - - - - - 0.834 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
65. TOP1 ENSGALG00000003681 30214 0.833 - - - - - - 0.833 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
66. RNF130 ENSGALG00000005820 13797 0.833 - - - - - - 0.833 - - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
67. C1H21ORF91 ENSGALG00000028290 5550 0.832 - - - - - - 0.832 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
68. ATP5H 53898 0.832 - - - - - - 0.832 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
69. ABCF2 ENSGALG00000034573 15639 0.831 - - - - - - 0.831 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
70. LAMTOR2 ENSGALG00000029881 35356 0.83 - - - - - - 0.830 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
71. EMC3 ENSGALG00000003738 10363 0.83 - - - - - - 0.830 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
72. YAF2 ENSGALG00000009540 8452 0.829 - - - - - - 0.829 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
73. DHCR7 ENSGALG00000004106 4731 0.829 - - - - - - 0.829 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
74. CCDC104 CCDC104 6584 0.829 - - - - - - 0.829 - - -
75. COMMD3 ENSGALG00000007900 8629 0.829 - - - - - - 0.829 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
76. RPS23 ENSGALG00000015617 430299 0.828 0.828 - - - - - - - - - ribosomal protein S23
77. PAXBP1 ENSGALG00000036833 5573 0.828 - - - - - - 0.828 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
78. ACAD9 ENSGALG00000005034 22100 0.827 - - - - - - 0.827 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
79. TCF7L2 ENSGALG00000008883 13688 0.827 - - - - - - 0.827 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
80. CWC22 ENSGALG00000009001 5984 0.826 - - - - - - 0.826 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
81. NOC3L ENSGALG00000035667 7441 0.825 - - - - - - 0.825 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
82. SIGMAR1 ENSGALG00000028996 12267 0.825 - - - - - - 0.825 - - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
83. TARS ENSGALG00000003288 12702 0.824 - - - - - - 0.824 - - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
84. PARP16 ENSGALG00000007365 9467 0.823 - - - - - - 0.823 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
85. ATP6V0B ENSGALG00000010091 14901 0.823 - - - - - - 0.823 - - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
86. UTP18 ENSGALG00000002985 7129 0.823 - - - - - - 0.823 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
87. FAM49A ENSGALG00000016463 6345 0.822 - - - - - - 0.822 - - - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
88. DPY30 ENSGALG00000010621 6818 0.822 - - - - - - 0.822 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
89. ACOT7 ENSGALG00000000652 7976 0.819 - - - - - - 0.819 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
90. TPP2 ENSGALG00000016865 7509 0.818 - - - - - - 0.818 - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
91. C2orf47 C2orf47 17769 0.818 - - - - - - 0.818 - - -
92. ETFDH ENSGALG00000009442 7671 0.817 - - - - - - 0.817 - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
93. VPS4B ENSGALG00000012879 6720 0.817 - - - - - - 0.817 - - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
94. CHCHD10 ENSGALG00000028810 10389 0.816 - - - - - - 0.816 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
95. DLC1 ENSGALG00000013715 5297 0.816 - - - - - - 0.816 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
96. IPO11 ENSGALG00000014740 4922 0.815 - - - - - - 0.815 - - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
97. DESI2 ENSGALG00000010678 4590 0.814 - - - - - - 0.814 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
98. TMED5 27507 0.813 - - - - - - 0.813 - - - transmembrane p24 trafficking protein 5
99. ACTR3 ENSGALG00000012159 16020 0.812 - - - - - - 0.812 - - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
100. STOML2 STOML2 15566 0.811 - - - - - - 0.811 - - -

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA