Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBBP8

Gene Name Gene ID Reads Annotation
RBBP8 ENSGALG00000014982 3255 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]











Genes with expression patterns similar to RBBP8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBBP8 ENSGALG00000014982 3255 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
2. CHAMP1 ENSGALG00000016813 508 2.452 - - 0.898 0.733 - - - - 0.821 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
3. ALMS1 ENSGALG00000044620 570 2.419 - - - 0.738 - - - - 0.942 0.739 ALMS1, centrosome and basal body associated protein, transcript variant X1
4. SPDL1 ENSGALG00000001942 4403 2.374 - - 0.729 - - - 0.770 - - 0.875 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
5. TMLHE ENSGALG00000007443 3619 2.354 - - 0.767 - - - - 0.750 - 0.837 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
6. SMC4 ENSGALG00000009553 15715 2.33 - - 0.818 - - - 0.700 - - 0.812 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
7. TPM4 ENSGALG00000002563 15621 2.305 - - 0.773 - - - - - 0.805 0.727 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
8. RAD50 ENSGALG00000006794 4308 2.29 - - 0.749 - - - 0.730 - - 0.811 RAD50 double strand break repair protein, transcript variant X4
9. QDPR ENSGALG00000030070 6953 2.236 - - 0.707 - - - - 0.732 - 0.797 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
10. ASAP1 ENSGALG00000037618 2887 2.223 - - - - - - 0.739 0.769 0.715 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
11. NDC80 ENSGALG00000014801 3237 2.218 - - 0.748 - - - 0.705 - - 0.765 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
12. NCBP1 ENSGALG00000002087 8907 2.179 - - 0.722 - - - - - 0.725 0.732 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
13. DCP1B 1306 1.857 - - 0.909 - - - - - 0.948 - decapping mRNA 1B
14. ZDHHC7 ENSGALG00000042522 1774 1.816 - - 0.920 - - - - - 0.896 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
15. YBX3 ENSGALG00000031890 819 1.786 - - 0.893 - - - - - 0.893 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
16. FASTKD3 ENSGALG00000033521 1186 1.785 - - - - - - - - 0.935 0.850 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
17. MIB1 ENSGALG00000014974 3583 1.775 - - 0.887 - - - - - 0.888 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
18. PCLO 249 1.764 - - - - - - - - 0.943 0.821 piccolo presynaptic cytomatrix protein
19. VWF ENSGALG00000017272 1012 1.761 - - - - - - - - 0.884 0.877 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
20. MTSS1 ENSGALG00000041969 1312 1.735 - - - - - - - - 0.895 0.840 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
21. DARS2 ENSGALG00000023749 2386 1.711 - - 0.906 - - - - 0.805 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
22. HYAL3 ENSGALG00000029000 712 1.711 - - 0.875 - - - - - - 0.836 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
23. LRRC71 ENSGALG00000027351 695 1.71 - - 0.889 - - - - - 0.821 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
24. FANCL ENSGALG00000030022 7423 1.709 - - - - - - 0.808 - - 0.901 FA complementation group L [Source:NCBI gene;Acc:421202]
25. TIAR TIAR 2471 1.707 - - 0.874 - - - - - - 0.833
26. WHSC1 1712 1.706 - - 0.889 - - - - - - 0.817 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
27. CHALK5 CHALK5 1351 1.702 - - 0.898 - - - - 0.804 - -
28. RNF114 ENSGALG00000008021 6078 1.688 - - 0.913 - - - - 0.775 - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
29. CRYM ENSGALG00000002484 3558 1.688 - - - - - - - - 0.833 0.855 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
30. FSTL4 ENSGALG00000031487 529 1.687 - - - - - - - - 0.861 0.826 follistatin like 4 [Source:NCBI gene;Acc:395163]
31. CNTRL ENSGALG00000001513 1773 1.685 - - 0.860 - - - - - - 0.825 centriolin [Source:NCBI gene;Acc:417121]
32. SLC37A3 ENSGALG00000012849 836 1.684 - - 0.889 - - - - - 0.795 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
33. SLC41A1 ENSGALG00000000721 1604 1.683 - - 0.893 - - - - 0.790 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
34. TTPAL ENSGALG00000004244 2734 1.677 - - 0.907 - - - 0.770 - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
35. HS2ST1 ENSGALG00000028423 4153 1.662 - - - - - - - 0.810 - 0.852 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
36. SMOC2 ENSGALG00000011205 340 1.661 - - 0.891 0.770 - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
37. AAMP ENSGALG00000011445 2528 1.657 - - 0.855 - - - - - 0.802 - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
38. LY6E ENSGALG00000041621 16227 1.654 - - - - - - 0.791 - - 0.863 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
39. WDR92 ENSGALG00000008760 3934 1.653 - - 0.889 - - - - - 0.764 - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
40. RALGAPA2 240 1.652 - - 0.854 - - - - - 0.798 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
41. GTF3C1 ENSGALG00000007387 5788 1.648 - - - - - - - - 0.848 0.800 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
42. POGZ ENSGALG00000036365 4056 1.646 - - 0.808 - - - - - 0.838 - pogo transposable element with ZNF domain, transcript variant X2
43. ERCC6 ENSGALG00000006254 3452 1.646 - - 0.751 - - - - - - 0.895 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
44. PGS1 ENSGALG00000007181 3187 1.646 - - 0.784 - - - - - 0.862 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
45. SEMA3E ENSGALG00000038225 677 1.641 - - - - - - - 0.741 0.900 - semaphorin 3E [Source:NCBI gene;Acc:374089]
46. RBX1 ENSGALG00000011993 26090 1.639 - - 0.865 - - - - - - 0.774 ring-box 1 [Source:NCBI gene;Acc:418001]
47. CAMSAP1 ENSGALG00000001692 2617 1.636 - - 0.873 - - - - - - 0.763 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
48. ATP6V0A1 ENSGALG00000003256 4408 1.635 - - - - - - - - 0.834 0.801 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
49. CHGA ENSGALG00000010820 1028 1.633 - - 0.866 - - - - - 0.767 - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
50. ECI2 ENSGALG00000012809 3692 1.627 - - - - - - - 0.820 - 0.807 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
51. SENP6 ENSGALG00000015901 8013 1.627 - - 0.820 - - - 0.807 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
52. TWSG1 ENSGALG00000008400 1869 1.624 - - 0.831 - - - - - - 0.793 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
53. WTAP ENSGALG00000011660 10811 1.624 - - 0.750 - - - - - 0.874 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
54. SNRNP48 ENSGALG00000013005 1468 1.623 - - - - - - - - 0.785 0.838 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
55. SLK ENSGALG00000008318 2220 1.621 - - 0.877 - - - - - - 0.744 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
56. CCNA2 ENSGALG00000011881 2574 1.618 - - 0.729 - - - - - - 0.889 cyclin A2 [Source:NCBI gene;Acc:396172]
57. NUBP1 ENSGALG00000007241 3791 1.613 - - 0.853 - - - - - - 0.760 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
58. QSER1 ENSGALG00000012030 4490 1.613 - - 0.820 - - - - - - 0.793 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
59. CPT2 ENSGALG00000010681 3211 1.609 - - 0.769 - - - - - - 0.840 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
60. SMDT1 ENSGALG00000011897 9360 1.608 - - - - - - - - 0.845 0.763 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
61. ARID2 ENSGALG00000033074 3461 1.607 - - 0.823 - - - 0.784 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
62. LRRN4 ENSGALG00000008815 481 1.603 - - - - - - - - 0.769 0.834 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
63. C6orf211 C6orf211 2644 1.602 - - 0.831 - - - - 0.771 - -
64. SP3 ENSGALG00000031796 8997 1.598 - - 0.818 - - - - - - 0.780 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
65. TRIM71 ENSGALG00000019622 1633 1.596 - - - - - - - 0.737 0.859 - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
66. CLUH ENSGALG00000005854 2100 1.595 - - - - - - - 0.775 - 0.820 clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
67. URM1 ENSGALG00000004971 17880 1.594 - - 0.865 - - - - - - 0.729 ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
68. WBP4 ENSGALG00000016949 5858 1.593 - - 0.791 - - - - - - 0.802 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
69. ALDH7A1 ENSGALG00000008229 5891 1.59 - - - - - - - 0.787 - 0.803 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
70. RIN3 ENSGALG00000010806 729 1.59 - - - - - - - 0.788 0.802 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
71. AGFG1 ENSGALG00000003052 4766 1.589 - - 0.856 - - - - 0.733 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
72. CTDP1 ENSGALG00000031461 4818 1.587 - - - - - - 0.767 - 0.820 - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
73. ENSGALG00000014171 ENSGALG00000014171 10383 1.584 - - - - - - - - 0.821 0.763
74. CTSO ENSGALG00000009373 4186 1.583 - - - - - - 0.706 - - 0.877 cathepsin O [Source:NCBI gene;Acc:422410]
75. PRPF38B ENSGALG00000001972 2009 1.583 - - 0.860 - - - - - - 0.723 pre-mRNA processing factor 38B
76. ZFR ENSGALG00000003235 8466 1.583 - - - - - - - 0.770 - 0.813 zinc finger RNA binding protein, transcript variant X3
77. MARC1 ENSGALG00000009453 5675 1.579 - - 0.837 - - - 0.742 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
78. ANKRA2 ENSGALG00000013511 3460 1.578 - - - - - - 0.785 0.793 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
79. SLC25A48 ENSGALG00000006341 2606 1.576 - - - - - - - 0.764 0.812 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
80. HOXB5 ENSGALG00000034907 3646 1.576 - - 0.797 - - - - - 0.779 - homeobox B5 [Source:NCBI gene;Acc:425096]
81. GLB1L2 ENSGALG00000001604 4057 1.576 - - 0.786 - - - 0.790 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
82. UHRF2 ENSGALG00000015052 1268 1.575 - - 0.815 - - - - - 0.760 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
83. SEC11C ENSGALG00000031663 4266 1.575 - - 0.717 - - - - 0.858 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
84. CCDC51 ENSGALG00000006465 1845 1.57 - - - - - - - 0.766 - 0.804 coiled-coil domain containing 51, transcript variant X1
85. RAD18 ENSGALG00000008368 7214 1.569 - - 0.711 - - - - - - 0.858 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
86. LAMP2 ENSGALG00000008572 198 1.569 - - - - - - - 0.740 - 0.829 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
87. NAA20 ENSGALG00000012587 11349 1.566 - - - - - - 0.723 - 0.843 - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
88. FECH ENSGALG00000038461 3491 1.565 - - 0.802 - - - - - - 0.763 ferrochelatase [Source:NCBI gene;Acc:374020]
89. ATP6V0C ENSGALG00000009229 125870 1.564 - - 0.809 - - - - - - 0.755 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
90. ARMC8 ENSGALG00000040889 2456 1.563 - - - - - - 0.744 - 0.819 - armadillo repeat containing 8 [Source:NCBI gene;Acc:424731]
91. VATB VATB 13756 1.559 - - - - - - 0.784 - 0.775 -
92. STRBP ENSGALG00000029927 3516 1.557 - - 0.828 - - - - - 0.729 - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
93. H4-I H4-I 2327 1.557 - - - - - - - 0.791 0.766 -
94. ANXA6 ENSGALG00000004357 2891 1.556 - - - - - - - 0.767 - 0.789 annexin A6 [Source:NCBI gene;Acc:395481]
95. PRPSAP1 ENSGALG00000021539 3517 1.556 - - 0.792 - - - - 0.764 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
96. SLC39A13 ENSGALG00000008122 2003 1.556 - - - - - - - - 0.747 0.809 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
97. MCPH1 ENSGALG00000016332 2097 1.555 - - - - - - 0.750 - - 0.805 microcephalin 1 [Source:NCBI gene;Acc:100125976]
98. AFG3L2 ENSGALG00000013853 1138 1.555 - - - - - - - - 0.731 0.824 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
99. ATG5 ENSGALG00000015387 7752 1.554 - - 0.806 - - - 0.748 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
100. GPX7 ENSGALG00000010633 7224 1.552 - - - - - - 0.704 0.848 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]

There are 1399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA