Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBBP4

Gene Name Gene ID Reads Annotation
RBBP4 ENSGALG00000003522 72455 RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]











Genes with expression patterns similar to RBBP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBBP4 ENSGALG00000003522 72455 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
2. MCTS1 ENSGALG00000008517 27514 1.625 - - - - 0.719 - 0.906 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
3. LSM5 ENSGALG00000041625 22307 1.58 - - - - 0.732 - 0.848 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
4. ATG16L1 ENSGALG00000001619 3562 1.564 - - - - 0.765 - 0.799 - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
5. MRPL54 ENSGALG00000027611 39450 0.926 - - - - - - 0.926 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
6. GLRX3 ENSGALG00000010464 22578 0.922 - - - - - - 0.922 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
7. EIF2B EIF2B 28702 0.919 - - - - - - 0.919 - - -
8. YWHAZ ENSGALG00000031387 84985 0.918 - - - - - - 0.918 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
9. VPS35 ENSGALG00000004375 8059 0.911 - - - - - - 0.911 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
10. RPF2 ENSGALG00000037087 12788 0.908 - - - - - - 0.908 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
11. RANBP1 ENSGALG00000002107 17715 0.907 - - - - - - 0.907 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
12. EIF4A2 ENSGALG00000008684 58507 0.906 - - - - - - 0.906 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
13. METAP2 ENSGALG00000011377 16311 0.904 - - - - - - 0.904 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
14. UQCRC1 ENSGALG00000005789 23201 0.904 - - - - - - 0.904 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
15. MAP3K7 ENSGALG00000015596 15164 0.899 - - - - - - 0.899 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
16. ENY2 ENSGALG00000036618 30314 0.893 - - - - - - 0.893 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
17. TUBB2C TUBB2C 44249 0.893 - - - - - - 0.893 - - -
18. MRPL15 ENSGALG00000041086 16820 0.891 - - - - - - 0.891 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
19. RAD21 ENSGALG00000029523 25658 0.889 - - - - - - 0.889 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
20. NOC4L ENSGALG00000002272 9644 0.889 - - - - - - 0.889 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
21. SPCS3 ENSGALG00000010839 19106 0.888 - - - - - - 0.888 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
22. CASP3 ENSGALG00000010638 11572 0.887 - - - - - - 0.887 - - - caspase 3 [Source:NCBI gene;Acc:395476]
23. RFC5 ENSGALG00000026517 26113 0.885 - - - - - - 0.885 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
24. COX7C ENSGALG00000027963 84312 0.885 - - - - - - 0.885 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
25. PSMD12 ENSGALG00000026225 17473 0.884 - - - - - - 0.884 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
26. WDR61 ENSGALG00000003221 11352 0.883 - - - - - - 0.883 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
27. PHAX ENSGALG00000014691 8114 0.882 - - - - - - 0.882 - - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
28. SIKE1 ENSGALG00000002147 20836 0.882 - - - - - - 0.882 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
29. CZH9ORF80 CZH9ORF80 12760 0.882 - - - - - - 0.882 - - -
30. TOMM20 ENSGALG00000035299 23431 0.88 - - - - - - 0.880 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
31. SMC4 ENSGALG00000009553 15715 0.88 - - - - - - 0.880 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
32. PSMC3 ENSGALG00000008108 22922 0.88 - - - - - - 0.880 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
33. GSPT1 15580 0.877 - - - - - - 0.877 - - - G1 to S phase transition 1, transcript variant X1
34. SNRNP40 ENSGALG00000000615 32298 0.877 - - - - - - 0.877 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
35. SRRM1 ENSGALG00000001283 23820 0.877 - - - - - - 0.877 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
36. TTYH2 ENSGALG00000026940 15628 0.876 - - - - - - 0.876 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
37. SKP2 ENSGALG00000003547 14637 0.876 - - - - - - 0.876 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
38. PRELID1 ENSGALG00000002990 55592 0.876 - - - - - - 0.876 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
39. BRP44L BRP44L 30452 0.875 - - - - - - 0.875 - - -
40. RPL35 ENSGALG00000035677 252113 0.873 - - - - - - 0.873 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
41. RPS3A ENSGALG00000010077 292185 0.872 - - - - - - 0.872 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
42. COMMD4 ENSGALG00000001572 31664 0.872 - - - - - - 0.872 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
43. VBP1 VBP1 14482 0.87 - - - - - - 0.870 - - -
44. LMAN1 ENSGALG00000034821 12788 0.869 - - - - - - 0.869 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
45. TMEM184C ENSGALG00000010019 7856 0.869 - - - - - - 0.869 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
46. KDM5B ENSGALG00000038948 50645 0.869 - - - - - - 0.869 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
47. SMU1 ENSGALG00000002014 8136 0.868 - - - - - - 0.868 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
48. GLO1 ENSGALG00000010127 31662 0.868 - - - - - - 0.868 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
49. AKAP1 ENSGALG00000005575 12051 0.868 - - - - - - 0.868 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
50. TMEM70 ENSGALG00000033568 10720 0.867 - - - - - - 0.867 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
51. NDUFA12 ENSGALG00000011325 19807 0.867 - - - - - - 0.867 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
52. NDUFV2 ENSGALG00000036625 29234 0.867 - - - - - - 0.867 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
53. RUVBL1 ENSGALG00000005931 9379 0.866 - - - - - - 0.866 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
54. PSMB7 ENSGALG00000001103 42683 0.866 - - - - - - 0.866 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
55. PTP4A2 ENSGALG00000003265 24826 0.866 - - - - - - 0.866 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
56. CPSF6 ENSGALG00000019355 7634 0.866 - - - - - - 0.866 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
57. NUP50 ENSGALG00000014222 11743 0.865 - - - - - - 0.865 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
58. SSR3 ENSGALG00000028683 24334 0.864 - - - - - - 0.864 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
59. ILF2 ENSGALG00000011570 23050 0.864 - - - - - - 0.864 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
60. UQCRH ENSGALG00000017380 55734 0.864 - - - - - - 0.864 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
61. PARP1 ENSGALG00000009228 39433 0.863 - - - - - - 0.863 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
62. NUPL1 NUPL1 8197 0.863 - - - - - - 0.863 - - -
63. BRP44 BRP44 17093 0.863 - - - - - - 0.863 - - -
64. LEPROT ENSGALG00000011047 7132 0.863 - - - - - - 0.863 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
65. PSMD3 ENSGALG00000033162 25615 0.861 - - - - - - 0.861 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
66. NXN 20202 0.861 - - - - - - 0.861 - - - nucleoredoxin, transcript variant X1
67. ZNF593 ENSGALG00000000542 79105 0.86 - - - - - - 0.860 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
68. ADSL ENSGALG00000012034 10280 0.859 - - - - - - 0.859 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
69. NEK6 ENSGALG00000001118 20333 0.859 - - - - - - 0.859 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
70. UBE2D1 ENSGALG00000021213 5876 0.859 - - - - - - 0.859 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
71. TXNDC17 ENSGALG00000027950 45004 0.859 - - - - - - 0.859 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
72. UBE2G2 ENSGALG00000005667 12689 0.859 - - - - - - 0.859 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
73. ACTR2 ENSGALG00000008779 17812 0.858 - - - - - - 0.858 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
74. CEP78 ENSGALG00000015179 5227 0.858 - - - - - - 0.858 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
75. ID1 ENSGALG00000034661 44524 0.858 - - - - - - 0.858 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
76. C11H16ORF80 C11H16ORF80 18673 0.858 - - - - - - 0.858 - - -
77. GATD3A ENSGALG00000016918 24760 0.857 - - - - - - 0.857 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
78. WDR43 ENSGALG00000032529 12235 0.857 - - - - - - 0.857 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
79. DKC1 ENSGALG00000005054 30350 0.856 - - - - - - 0.856 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
80. ZNHIT3 ENSGALG00000026031 8652 0.856 - - - - - - 0.856 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
81. RPL36AL ENSGALG00000004952 205590 0.856 - - - - - - 0.856 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
82. RBP5 ENSGALG00000014662 31268 0.856 - - - - - - 0.856 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
83. NDUFAB1 ENSGALG00000006073 40467 0.856 - - - - - - 0.856 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
84. PPP1R2 ENSGALG00000029789 11594 0.855 - - - - - - 0.855 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
85. XRN2 ENSGALG00000008372 22164 0.855 - - - - - - 0.855 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
86. TMPO ENSGALG00000011504 14454 0.855 - - - - - - 0.855 - - - thymopoietin [Source:NCBI gene;Acc:417923]
87. PSMB2 ENSGALG00000026421 51885 0.855 - - - - - - 0.855 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
88. RBM17 ENSGALG00000006332 12656 0.854 - - - - - - 0.854 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
89. AP2A2 ENSGALG00000006799 13874 0.853 - - - - - - 0.853 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
90. WTAP ENSGALG00000011660 10811 0.853 - - - - - - 0.853 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
91. MED17 ENSGALG00000017218 5821 0.853 - - - - - - 0.853 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
92. HMGB2 ENSGALG00000010745 89235 0.853 - - - - - - 0.853 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
93. C1QBP ENSGALG00000001654 34814 0.853 - - - - - - 0.853 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
94. HSPA4 ENSGALG00000040882 20966 0.853 - - - - - - 0.853 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
95. SLC25A17 ENSGALG00000012013 13948 0.852 - - - - - - 0.852 - - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
96. ATG5 ENSGALG00000015387 7752 0.851 - - - - - - 0.851 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
97. BUB1 ENSGALG00000008233 11536 0.851 - - - - - - 0.851 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
98. CRLS1 ENSGALG00000009214 8652 0.851 - - - - - - 0.851 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
99. ENSGALG00000002903 ENSGALG00000002903 18304 0.85 - - - - - - 0.850 - - -
100. MRPL50 ENSGALG00000015543 11649 0.85 - - - - - - 0.850 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]

There are 884 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA