Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RASGEF1B

Gene Name Gene ID Reads Annotation
RASGEF1B 2014 RasGEF domain family member 1B, transcript variant X8











Genes with expression patterns similar to RASGEF1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RASGEF1B 2014 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RasGEF domain family member 1B, transcript variant X8
2. MRPL10 ENSGALG00000014387 12386 1.798 - - - - - - 0.820 0.978 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
3. FTSJ2 FTSJ2 2951 1.781 - - - - - - 0.783 0.998 - -
4. MBNL2 ENSGALG00000016890 3162 1.772 - - - - - - 0.805 0.967 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
5. RABL5 RABL5 5264 1.754 - - - - - - 0.775 0.979 - -
6. CDC73 ENSGALG00000002469 4586 1.735 - - - - - - 0.771 0.964 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
7. ENSGALG00000007574 ENSGALG00000007574 7695 1.596 - - - - - - 0.743 0.853 - -
8. CEP290 ENSGALG00000011177 1559 1.591 - - - - - 0.735 0.856 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
9. SPAG9 ENSGALG00000034001 2314 1.582 - - - - - 0.721 0.861 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
10. SNRNP48 ENSGALG00000013005 1468 1.504 - - - - - 0.716 0.788 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
11. CAPN9 158 0.999 - - - - - - - 0.999 - - calpain 9
12. LOC420160 ENSGALG00000004252 188 0.999 - - - - - - - 0.999 - - cathepsin L1-like, transcript variant X3
13. SLC26A8 ENSGALG00000040498 253 0.999 - - - - - - - 0.999 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
14. TOR1B TOR1B 197 0.999 - - - - - - - 0.999 - -
15. YTHDF3 ENSGALG00000039774 170 0.999 - - - - - - - 0.999 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
16. FPGT ENSGALG00000026958 788 0.999 - - - - - - - 0.999 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
17. WNK2 ENSGALG00000038850 4712 0.998 - - - - - - - 0.998 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
18. SETD2 ENSGALG00000042051 2981 0.998 - - - - - - - 0.998 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
19. VASH1 ENSGALG00000043036 1235 0.998 - - - - - - - 0.998 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
20. NCS1 ENSGALG00000012710 1104 0.998 - - - - - - - 0.998 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
21. KPNA4 ENSGALG00000009549 3674 0.998 - - - - - - - 0.998 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
22. ENSGALG00000001591 ENSGALG00000001591 784 0.998 - - - - - - - 0.998 - -
23. NKX-6.2 NKX-6.2 1370 0.997 - - - - - - - 0.997 - -
24. NR3C2 ENSGALG00000010035 603 0.997 - - - - - - - 0.997 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
25. CAPRIN2 1473 0.997 - - - - - - - 0.997 - - caprin family member 2, transcript variant X7
26. TBCE ENSGALG00000013950 3076 0.996 - - - - - - - 0.996 - - tubulin folding cofactor E
27. LIPA ENSGALG00000006378 4414 0.996 - - - - - - - 0.996 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
28. SLX4 ENSGALG00000031841 1208 0.996 - - - - - - - 0.996 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
29. SEMA3F ENSGALG00000029621 2079 0.995 - - - - - - - 0.995 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
30. GNE ENSGALG00000015331 1577 0.995 - - - - - - - 0.995 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
31. GNB1L ENSGALG00000001925 1981 0.994 - - - - - - - 0.994 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
32. AARSD1 ENSGALG00000002880 3068 0.993 - - - - - - - 0.993 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
33. PLA2G7 ENSGALG00000016713 2100 0.993 - - - - - - - 0.993 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
34. CXorf23 1582 0.993 - - - - - - - 0.993 - - chromosome X open reading frame 23, transcript variant X3
35. HIP1R ENSGALG00000031511 1981 0.992 - - - - - - - 0.992 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
36. FNTA ENSGALG00000015397 3741 0.992 - - - - - - - 0.992 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
37. HMOX1 ENSGALG00000012550 1186 0.991 - - - - - - - 0.991 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
38. ENSGALG00000005615 ENSGALG00000005615 4354 0.991 - - - - - - - 0.991 - -
39. TLN2 2295 0.991 - - - - - - - 0.991 - - talin 2, transcript variant X5
40. FGD5 ENSGALG00000008546 4031 0.991 - - - - - - - 0.991 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
41. EXOSC1 ENSGALG00000039917 5259 0.991 - - - - - - - 0.991 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
42. C2CD2 ENSGALG00000016148 2734 0.99 - - - - - - - 0.990 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
43. CHST2 ENSGALG00000034507 6172 0.989 - - - - - - - 0.989 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
44. C5orf63 C5orf63 3718 0.988 - - - - - - - 0.988 - -
45. MAP4K5 ENSGALG00000012321 3036 0.988 - - - - - - - 0.988 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
46. WDR82 ENSGALG00000025904 4783 0.987 - - - - - - - 0.987 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
47. PAM16 9684 0.986 - - - - - - - 0.986 - - presequence translocase associated motor 16 homolog, transcript variant X2
48. HVCN1 ENSGALG00000004562 2550 0.985 - - - - - - - 0.985 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
49. UTP23 ENSGALG00000032400 3601 0.985 - - - - - - - 0.985 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
50. VPS26A ENSGALG00000004174 9198 0.984 - - - - - - - 0.984 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
51. DLGAP4 ENSGALG00000001046 6872 0.984 - - - - - - - 0.984 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
52. CABLES1 ENSGALG00000014998 1636 0.984 - - - - - - - 0.984 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
53. UBE2Q2 3861 0.981 - - - - - - - 0.981 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
54. POLDIP2 ENSGALG00000003211 11664 0.981 - - - - - - - 0.981 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
55. CTSA ENSGALG00000006876 5380 0.98 - - - - - - - 0.980 - - cathepsin A [Source:NCBI gene;Acc:428163]
56. C1orf21 ENSGALG00000020922 4035 0.98 - - - - - - - 0.980 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
57. CPEB2 ENSGALG00000014516 1187 0.979 - - - - - - - 0.979 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
58. FGD3 ENSGALG00000005237 4410 0.978 - - - - - - - 0.978 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
59. ITCH ENSGALG00000040474 2646 0.976 - - - - - - - 0.976 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
60. EMC1 ENSGALG00000003969 6876 0.973 - - - - - - - 0.973 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
61. C10orf11 C10orf11 3087 0.973 - - - - - - - 0.973 - -
62. TAF12 ENSGALG00000000991 8709 0.972 - - - - - - - 0.972 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
63. AKR1B10L3 ENSGALG00000019284 5869 0.968 - - - - - - - 0.968 - - aldo-keto reductase family 1 member B10-like 3
64. UBE2J2 ENSGALG00000001848 6527 0.965 - - - - - - - 0.965 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
65. WDR45B ENSGALG00000001563 5870 0.964 - - - - - - - 0.964 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
66. ENSGALG00000020092 ENSGALG00000020092 3067 0.964 - - - - - - - 0.964 - -
67. METTL6 ENSGALG00000040665 4467 0.964 - - - - - - - 0.964 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
68. TARS ENSGALG00000003288 12702 0.964 - - - - - - - 0.964 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
69. TYW3 ENSGALG00000032549 4869 0.96 - - - - - - - 0.960 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
70. MRPL28 ENSGALG00000007473 19134 0.956 - - - - - - - 0.956 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
71. PCDH1 ENSGALG00000002553 2938 0.949 - - - - - - - 0.949 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
72. PHF20L1 ENSGALG00000033205 7598 0.948 - - - - - - - 0.948 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
73. SRPK2 ENSGALG00000008154 7385 0.947 - - - - - - - 0.947 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
74. SRP9 ENSGALG00000026009 12418 0.946 - - - - - - - 0.946 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
75. TCEA2 ENSGALG00000005976 9143 0.941 - - - - - - - 0.941 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
76. POLR2C ENSGALG00000001168 10703 0.937 - - - - - - - 0.937 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
77. TNRC6A ENSGALG00000006068 9166 0.936 - - - - - - - 0.936 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
78. HIPK3 ENSGALG00000011695 6842 0.923 - - - - - - - 0.923 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
79. LUC7L3 ENSGALG00000007386 11944 0.923 - - - - - - - 0.923 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
80. THOC2 ENSGALG00000008507 9501 0.921 - - - - - - - 0.921 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
81. NPEPL1 ENSGALG00000007533 5908 0.92 - - - - - - - 0.920 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
82. COPS8 ENSGALG00000033385 10166 0.914 - - - - - - 0.914 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
83. APPBP2 ENSGALG00000005314 6447 0.894 - - - - - - - 0.894 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
84. COX16 ENSGALG00000020449 5959 0.891 - - - - - - - 0.891 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
85. NSG1 ENSGALG00000015010 5829 0.89 - - - - - - 0.890 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
86. FBXO4 ENSGALG00000014851 2333 0.888 - - - - - - - 0.888 - - F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]
87. DCLK2 ENSGALG00000032386 2253 0.888 - - - - - - 0.888 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
88. NID2 ENSGALG00000012394 6717 0.887 - - - - - - - 0.887 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
89. ASPM ENSGALG00000032398 12784 0.887 - - - - - - - 0.887 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
90. DBNDD2 ENSGALG00000003921 8301 0.884 - - - - - - 0.884 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
91. ZNF451 ENSGALG00000016282 3380 0.883 - - - - - - - 0.883 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
92. RALBP1 ENSGALG00000008405 13780 0.881 - - - - - - - 0.881 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
93. ARIH2 ENSGALG00000006956 3692 0.88 - - - - - - - 0.880 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
94. NEFM ENSGALG00000000317 6992 0.879 - - - - - - 0.879 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
95. RNF20 ENSGALG00000015548 7199 0.876 - - - - - - 0.876 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
96. B4GALT3 ENSGALG00000022891 2825 0.872 - - - - - - 0.872 - - - beta-1,4-galactosyltransferase 3
97. TM2D3 ENSGALG00000026271 2566 0.87 - - - - - - 0.870 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
98. BPHL ENSGALG00000029659 501 0.867 - - - - - - 0.867 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
99. GPHN ENSGALG00000009587 3045 0.867 - - - - - - - 0.867 - - gephyrin [Source:NCBI gene;Acc:428878]
100. CCNL1 ENSGALG00000009699 1033 0.865 - - - - - - 0.865 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA