Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RASGEF1A

Gene Name Gene ID Reads Annotation
RASGEF1A ENSGALG00000002525 918 RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]











Genes with expression patterns similar to RASGEF1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RASGEF1A ENSGALG00000002525 918 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
2. EX-FABP EX-FABP 516 1.766 - - - - - - - 0.976 0.790 -
3. DNAJC11 ENSGALG00000000627 769 1.748 - - - - - - - 0.963 0.785 - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
4. AP3M2 ENSGALG00000038155 3372 1.724 - - - - - - - 0.809 0.915 - adaptor related protein complex 3 subunit mu 2 [Source:HGNC Symbol;Acc:HGNC:570]
5. NXT2 ENSGALG00000008092 2477 1.717 - - - - - - - 0.907 0.810 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
6. ECI2 ENSGALG00000012809 3692 1.686 - - - - - - - 0.942 0.744 - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
7. SNAPC3 ENSGALG00000011323 1742 1.666 - - - - - - - 0.887 0.779 - small nuclear RNA activating complex polypeptide 3 [Source:HGNC Symbol;Acc:HGNC:11136]
8. DBR1 ENSGALG00000043797 1896 1.666 - - - - - - 0.744 0.922 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
9. FA2H ENSGALG00000002775 396 1.622 - - - - - - 0.726 0.896 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
10. LOC769139 ENSGALG00000026754 753 1.45 - - - - - 0.714 0.736 - - - feather keratin 1-like, transcript variant X2
11. NPAS3 ENSGALG00000029022 1950 1.432 - - - - - 0.722 0.710 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
12. DBT ENSGALG00000005280 2893 1.431 - - - - - - - - 0.704 0.727 dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
13. SEMA3E ENSGALG00000038225 677 0.98 - - - - - - - 0.980 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
14. KIAA0930 ENSGALG00000014226 1243 0.979 - - - - - - - 0.979 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
15. PHLPP2 ENSGALG00000000875 561 0.979 - - - - - - - 0.979 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
16. TFG ENSGALG00000015299 849 0.977 - - - - - - - 0.977 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
17. SLC30A2 ENSGALG00000010375 44 0.976 - - - - - - - 0.976 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
18. GAA ENSGALG00000038853 158 0.976 - - - - - - - 0.976 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
19. TRIM62 ENSGALG00000028437 5124 0.976 - - - - - - - 0.976 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
20. MDM4 ENSGALG00000000636 91 0.975 - - - - - - - 0.975 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
21. VPS37A ENSGALG00000013646 55 0.975 - - - - - - - 0.975 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
22. CWH43 ENSGALG00000041921 68 0.975 - - - - - - - 0.975 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
23. TMEM200A ENSGALG00000002282 77 0.975 - - - - - - - 0.975 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
24. DSG2 ENSGALG00000015142 67 0.974 - - - - - - - 0.974 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
25. FUBP1 ENSGALG00000008939 2850 0.974 - - - - - - - 0.974 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
26. YARS2 503 0.973 - - - - - - - 0.973 - - tyrosyl-tRNA synthetase 2
27. LAMP2 ENSGALG00000008572 198 0.973 - - - - - - - 0.973 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
28. LIPG ENSGALG00000043734 2490 0.972 - - - - - - - 0.972 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
29. CLUH ENSGALG00000005854 2100 0.972 - - - - - - - 0.972 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
30. ENSGALG00000001854 ENSGALG00000001854 965 0.971 - - - - - - - 0.971 - -
31. C4BPA ENSGALG00000001175 4278 0.97 - - - - - - - 0.970 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
32. MRC1 ENSGALG00000008629 259 0.97 - - - - - - - 0.970 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
33. CCDC51 ENSGALG00000006465 1845 0.97 - - - - - - - 0.970 - - coiled-coil domain containing 51, transcript variant X1
34. HSPA13 ENSGALG00000019201 712 0.969 - - - - - - - 0.969 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
35. CHUK ENSGALG00000003289 5698 0.968 - - - - - - - 0.968 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
36. B3GNT7 ENSGALG00000007701 929 0.967 - - - - - - - 0.967 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
37. LOC422106 ENSGALG00000019757 453 0.966 - - - - - - - 0.966 - - uncharacterized LOC422106
38. ENSGALG00000016572 ENSGALG00000016572 79 0.966 - - - - - - - 0.966 - -
39. SENP5 ENSGALG00000008545 909 0.965 - - - - - - - 0.965 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
40. TRMT61B ENSGALG00000008979 615 0.964 - - - - - - - 0.964 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
41. II II 929 0.963 - - - - - - - 0.963 - -
42. PYGL ENSGALG00000012365 4691 0.961 - - - - - - - 0.961 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
43. RIN3 ENSGALG00000010806 729 0.961 - - - - - - - 0.961 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
44. CASP7 ENSGALG00000008933 506 0.961 - - - - - - - 0.961 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
45. SLC25A48 ENSGALG00000006341 2606 0.96 - - - - - - - 0.960 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
46. ZBTB26 ENSGALG00000042762 1920 0.96 - - - - - - - 0.960 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
47. SOX5 ENSGALG00000032768 998 0.959 - - - - - - - 0.959 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
48. CENPC1 CENPC1 3324 0.958 - - - - - - - 0.958 - -
49. ANXA6 ENSGALG00000004357 2891 0.956 - - - - - - - 0.956 - - annexin A6 [Source:NCBI gene;Acc:395481]
50. TES ENSGALG00000031934 5908 0.956 - - - - - - - 0.956 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
51. AMER1 ENSGALG00000007599 994 0.956 - - - - - - - 0.956 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
52. TCEANC ENSGALG00000016581 948 0.956 - - - - - - - 0.956 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
53. TRAM2 ENSGALG00000016673 438 0.955 - - - - - - - 0.955 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
54. ENSGALG00000006569 ENSGALG00000006569 2169 0.955 - - - - - - - 0.955 - -
55. ORAI1 ENSGALG00000004240 515 0.954 - - - - - - - 0.954 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
56. CECR5L ENSGALG00000005020 116 0.952 - - - - - - - 0.952 - - cat eye syndrome chromosome region, candidate 5-like
57. EDA ENSGALG00000035966 602 0.952 - - - - - - - 0.952 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
58. GADD45 GADD45 8780 0.952 - - - - - - - 0.952 - -
59. ARAP2 ENSGALG00000041373 233 0.952 - - - - - - - 0.952 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
60. PAMR1 ENSGALG00000007886 928 0.951 - - - - - - - 0.951 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
61. HDAC4 ENSGALG00000004288 2124 0.951 - - - - - - - 0.951 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
62. COL6A2 ENSGALG00000039216 892 0.951 - - - - - - - 0.951 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
63. HSDL1 ENSGALG00000003273 1108 0.951 - - - - - - - 0.951 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
64. GPX7 ENSGALG00000010633 7224 0.951 - - - - - - - 0.951 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
65. TOX ENSGALG00000039102 1434 0.948 - - - - - - - 0.948 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
66. LDHA ENSGALG00000006300 4796 0.946 - - - - - - - 0.946 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
67. SLC41A1 ENSGALG00000000721 1604 0.945 - - - - - - - 0.945 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
68. TM2D3 ENSGALG00000026271 2566 0.944 - - - - - - - 0.944 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
69. NRG4 ENSGALG00000002952 1440 0.941 - - - - - - - 0.941 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
70. UBA7 ENSGALG00000036263 2918 0.941 - - - - - - - 0.941 - - ubiquitin-like modifier activating enzyme 7
71. ISCA2 ENSGALG00000020417 1130 0.94 - - - - - - - 0.940 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
72. LRRC45 ENSGALG00000002877 1751 0.939 - - - - - - - 0.939 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
73. STK17B ENSGALG00000007924 519 0.938 - - - - - - - 0.938 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
74. MAPKKK3L ENSGALG00000005884 1011 0.937 - - - - - - - 0.937 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
75. NIT1 ENSGALG00000007585 1256 0.936 - - - - - - - 0.936 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
76. PRPSAP1 ENSGALG00000021539 3517 0.934 - - - - - - - 0.934 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
77. CHKA ENSGALG00000036754 5077 0.933 - - - - - - - 0.933 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
78. GJB6 ENSGALG00000017136 500 0.933 - - - - - - - 0.933 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
79. CHALK5 CHALK5 1351 0.933 - - - - - - - 0.933 - -
80. SALL1 ENSGALG00000039238 3740 0.932 - - - - - - - 0.932 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
81. ABCB10 ENSGALG00000011096 1407 0.931 - - - - - - - 0.931 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
82. SEC11C ENSGALG00000031663 4266 0.931 - - - - - - - 0.931 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
83. ANKRD40L ENSGALG00000026189 887 0.931 - - - - - - - 0.931 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
84. ENSGALG00000004032 ENSGALG00000004032 2010 0.929 - - - - - - - 0.929 - -
85. H4-I H4-I 2327 0.926 - - - - - - - 0.926 - -
86. LRAT ENSGALG00000009276 220 0.923 - - - - - - - 0.923 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
87. ENSGALG00000026213 ENSGALG00000026213 562 0.921 - - - - - - - - 0.921 -
88. ENSGALG00000014441 ENSGALG00000014441 1442 0.921 - - - - - - - 0.921 - -
89. MSRB1 ENSGALG00000005414 4197 0.919 - - - - - - - 0.919 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
90. TRIM71 ENSGALG00000019622 1633 0.917 - - - - - - - 0.917 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
91. GALK2 ENSGALG00000036201 1016 0.917 - - - - - - - 0.917 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
92. PSMD1 ENSGALG00000007664 7609 0.915 - - - - - - - 0.915 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
93. PINK1 ENSGALG00000037593 3794 0.914 - - - - - - - 0.914 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
94. LPIN1 ENSGALG00000016456 1044 0.912 - - - - - - - 0.912 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
95. E2F4 ENSGALG00000001722 2916 0.908 - - - - - - - 0.908 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
96. TBX3 ENSGALG00000036043 2888 0.904 - - - - - - - 0.904 - - T-box 3 [Source:NCBI gene;Acc:374202]
97. TUSC3 ENSGALG00000013674 2848 0.903 - - - - - - - 0.903 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
98. TCP11L2 ENSGALG00000012658 1671 0.901 - - - - - - - 0.901 - - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
99. AKR1B1L ENSGALG00000003466 6237 0.9 - - - - - - - 0.900 - - aldo-keto reductase family 1 member E2 [Source:NCBI gene;Acc:418171]
100. CGT CGT 948 0.899 - - - - - - - 0.899 - -

There are 292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA