Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RAPH1

Gene Name Gene ID Reads Annotation
RAPH1 RAPH1 294










Genes with expression patterns similar to RAPH1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RAPH1 RAPH1 294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. phc2b_1 ENSDARG00000013224 1316 1.785 - 0.882 - - - 0.903 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
3. ADCYAP1R1 ADCYAP1R1 118 1.743 - - - - - 0.969 0.774 - -
4. BX004890.2 BX004890.2 84 1.735 - - 0.747 - - 0.988 - - -
5. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.73 - - 0.745 - - 0.985 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
6. GPR156 ENSDARG00000086215 126 1.713 - 0.779 - - - 0.934 - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
7. fgf17 ENSDARG00000102778 136 1.71 - 0.753 - - - 0.957 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
8. hs3st3l ENSDARG00000059903 184 1.708 - 0.809 - - - 0.899 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
9. srpk1b ENSDARG00000031560 2079 1.707 - 0.803 - - - 0.904 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
10. kctd1 ENSDARG00000074056 652 1.702 0.715 - - - - 0.987 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
11. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.698 - 0.799 - - - 0.899 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
12. CABZ01073795.1 ENSDARG00000010729 52 1.695 0.755 - - - - 0.940 - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
13. gpsm1b ENSDARG00000054874 1308 1.69 - 0.760 - - - 0.930 - - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
14. asun 483 1.688 - 0.735 - - - 0.953 - - - asunder, spermatogenesis regulator homolog (Drosphila), transcript variant X1
15. FP102071.1 ENSDARG00000097994 170 1.683 - 0.725 - - - 0.958 - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
16. ENSDARG00000077141 ENSDARG00000077141 227 1.672 - 0.749 - - - 0.923 - - -
17. toporsa ENSDARG00000037260 149 1.672 - - - - - 0.967 0.705 - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
18. C1H10orf12 C1H10orf12 1663 1.671 - 0.753 - - - 0.918 - - -
19. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.67 - 0.725 - - - 0.945 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
20. hspb11 ENSDARG00000002204 879 1.653 - - - - - 0.783 0.870 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
21. CT990561.1 ENSDARG00000058284 566 1.652 - - - - - 0.876 0.776 - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
22. SGIP1 SGIP1 236 1.648 - 0.753 - - - 0.895 - - -
23. gtf3c3 ENSDARG00000043247 202 1.628 - 0.799 - - - 0.829 - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
24. RGS9BP ENSDARG00000086756 65 1.58 - - - - - 0.866 0.714 - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
25. st6galnac5a ENSDARG00000039220 76 1.566 - - 0.718 - - 0.848 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
26. CABZ01016567.1 CABZ01016567.1 73 1.555 - 0.705 - - - 0.850 - - -
27. noc3l ENSDARG00000002487 230 1.552 - 0.742 - - - 0.810 - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
28. dyrk4 ENSDARG00000070734 264 1.539 - 0.819 - - - - 0.720 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-091015-3]
29. erfl3 ENSDARG00000062801 149 1.531 - - - - - 0.768 0.763 - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
30. kbtbd12 ENSDARG00000001882 1196 1.52 - 0.786 - - - - 0.734 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
31. ryr3 ENSDARG00000071331 6795 1.51 - 0.777 - - - - 0.733 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
32. cacna2d3 ENSDARG00000078760 211 1.509 - - - - - 0.790 0.719 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
33. efna2 efna2 428 1.483 - - - - - 0.768 0.715 - -
34. ncana 1537 1.479 - 0.753 - - - 0.726 - - - neurocan a
35. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.474 - - 0.755 - - - 0.719 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
36. 5S_rRNA_18 5S_rRNA_18 270 1.462 0.711 - 0.751 - - - - - -
37. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 1.461 - 0.739 - - - 0.722 - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
38. otpa ENSDARG00000014201 2290 1.449 0.729 - - - - 0.720 - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
39. setd3 ENSDARG00000016513 1507 1.449 - - - - - 0.723 0.726 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
40. npffr1l2 ENSDARG00000062631 127 1.433 - 0.700 - - - 0.733 - - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
41. MYOT ENSDARG00000076312 1791 1.417 - 0.701 - - - - 0.716 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
42. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.991 - - - - - 0.991 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
43. PARM1 ENSDARG00000114063 58 0.99 - - - - - 0.990 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
44. opn4.1 ENSDARG00000007553 66 0.99 - - - - - 0.990 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
45. CT955963.1 ENSDARG00000100370 23 0.989 - - - - - 0.989 - - -
46. CAMK1 CAMK1 28 0.989 - - - - - 0.989 - - -
47. CABZ01044814.2 CABZ01044814.2 25711 0.989 - - - - - 0.989 - - -
48. CNTNAP1 ENSDARG00000074524 73 0.989 - - - - - 0.989 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
49. si:ch211-223f7.1 si:ch211-223f7.1 38 0.989 - - - - - 0.989 - - -
50. sgms2 57 0.989 - - - - - 0.989 - - - sphingomyelin synthase 2, transcript variant X1
51. ADORA1 ADORA1 8 0.989 - - - - - 0.989 - - -
52. CABZ01062083.1 CABZ01062083.1 40 0.988 - - - - - 0.988 - - -
53. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.988 - - - - - 0.988 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
54. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.988 - - - - - 0.988 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
55. AL953879.1 AL953879.1 5 0.988 - - - - - 0.988 - - -
56. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.988 - - - - - 0.988 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
57. CU062667.1 CU062667.1 4 0.988 - - - - - 0.988 - - -
58. ATXN1L ENSDARG00000086977 4 0.988 - - - - - 0.988 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
59. zgc:154142 ENSDARG00000100792 42 0.988 - - - - - 0.988 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
60. PLCXD2 ENSDARG00000058200 8 0.988 - - - - - 0.988 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
61. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.988 - - - - - 0.988 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
62. pcdh2g6 9 0.988 - - - - - 0.988 - - - protocadherin 2 gamma 6
63. slc35a5 ENSDARG00000000001 17 0.988 - - - - - 0.988 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
64. PFKFB1 ENSDARG00000037140 5 0.988 - - - - - 0.988 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
65. scpp5 ENSDARG00000078622 15 0.988 - - - - - 0.988 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
66. sdr42e1 ENSDARG00000098838 25 0.988 - - - - - 0.988 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
67. U1_55 U1_55 4 0.988 - - - - - 0.988 - - -
68. pdk2 pdk2 32 0.988 - - - - - 0.988 - - -
69. ftr03 8 0.988 - - - - - 0.988 - - - finTRIM family, member 3
70. si:dkey-192k22.2 ENSDARG00000095111 4 0.988 - - - - - 0.988 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
71. si:dkey-51d8.11 8 0.988 - - - - - 0.988 - - - si:dkey-51d8.11, transcript variant X6
72. irgf1 ENSDARG00000070774 7 0.988 - - - - - 0.988 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
73. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.988 - - - - - 0.988 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
74. CABZ01079192.1 ENSDARG00000101629 23 0.988 - - - - - 0.988 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
75. retsatl ENSDARG00000034989 41 0.988 - - - - - 0.988 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
76. zgc:73349 zgc:73349 4 0.988 - - - - - 0.988 - - -
77. BX664721.5 BX664721.5 462 0.987 - - - - - 0.987 - - -
78. slc8a4a ENSDARG00000055154 90 0.987 - - - - - 0.987 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
79. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.986 - - - - - 0.986 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
80. gak ENSDARG00000090654 695 0.986 - - - - - 0.986 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
81. cenpk ENSDARG00000039616 744 0.986 - - - - - 0.986 - - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
82. GRIN2B GRIN2B 140 0.985 - - - - - 0.985 - - -
83. si:dkey-163m14.10 si:dkey-163m14.10 33 0.985 - - - - - 0.985 - - -
84. kcng1 ENSDARG00000099038 23 0.985 - - - - - 0.985 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
85. msxe msxe 362 0.985 - - - - - 0.985 - - -
86. DUSP19 DUSP19 10 0.985 - - - - - 0.985 - - -
87. arf3a ENSDARG00000070539 29 0.985 - - - - - 0.985 - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
88. hspbp1 ENSDARG00000102937 260 0.985 - - - - - 0.985 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
89. PKN1 PKN1 42 0.985 - - - - - 0.985 - - -
90. mir10b-2 116 0.985 - - - - - 0.985 - - - microRNA 10b-2
91. GPC6 GPC6 4 0.985 - - - - - 0.985 - - -
92. pstpip1a ENSDARG00000060860 23 0.985 - - - - - 0.985 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
93. entpd2b ENSDARG00000044795 7 0.984 - - - - - 0.984 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
94. BX324198.1 BX324198.1 12 0.984 - - - - - 0.984 - - -
95. gpr155b ENSDARG00000071086 54 0.984 - - - - - 0.984 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
96. AVL9 ENSDARG00000055538 329 0.984 - - - - - 0.984 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
97. NPFFR1 ENSDARG00000111997 29 0.984 - - - - - 0.984 - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
98. CABZ01030262.1 CABZ01030262.1 11 0.984 - - - - - 0.984 - - -
99. CT030712.1 ENSDARG00000044355 83 0.984 - - - - - 0.984 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
100. CD81 CD81 67 0.983 - - - - - 0.983 - - -

There are 1467 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA