Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAPGEFL1

Gene Name Gene ID Reads Annotation
RAPGEFL1 ENSDARG00000079912 1074 Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]










Genes with expression patterns similar to RAPGEFL1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RAPGEFL1 ENSDARG00000079912 1074 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
2. CABZ01003826.1_1 CABZ01003826.1_1 1154 2.445 - 0.885 - - - 0.754 - 0.806 -
3. sptssa ENSDARG00000071203 2306 2.413 0.821 0.776 - - - 0.816 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
4. wdfy4 ENSDARG00000077009 802 2.383 - 0.858 - - - 0.787 0.738 - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
5. gpr143 ENSDARG00000034572 559 2.378 - - - - - 0.832 0.780 0.766 - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
6. rassf6 ENSDARG00000000804 1090 2.358 - 0.703 - - - - 0.775 0.880 - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
7. CABZ01114089.1 CABZ01114089.1 127 1.83 - 0.902 - - - - - 0.928 -
8. fam63b 484 1.827 - 0.885 - - - - - 0.942 - family with sequence similarity 63, member B
9. grk5 ENSDARG00000032801 490 1.722 - 0.893 - - - 0.829 - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
10. mlh1 ENSDARG00000025948 130 1.722 - - - - - - 0.777 0.945 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
11. wnt6b ENSDARG00000073935 236 1.717 - 0.931 - - - - 0.786 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
12. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.708 - 0.798 - - - - - 0.910 - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
13. unc93a ENSDARG00000041554 427 1.699 - 0.924 - - - 0.775 - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
14. elp3 ENSDARG00000042005 936 1.699 - - - - - 0.759 - 0.940 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
15. BX005410.1 ENSDARG00000115561 373 1.694 - - - - 0.794 - - 0.900 - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
16. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.694 - 0.877 - - - 0.817 - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
17. FAM126B 588 1.693 - 0.765 - - - - - 0.928 - family with sequence similarity 126 member B
18. wdr18 ENSDARG00000041113 810 1.69 - 0.822 - - - - - 0.868 - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
19. wtap ENSDARG00000042642 1779 1.686 - 0.910 - - - 0.776 - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
20. AGAP3 ENSDARG00000087822 4128 1.683 - 0.835 - - - 0.848 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
21. fbxo7 ENSDARG00000099833 304 1.677 - - - - - - 0.746 0.931 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
22. TRIP10 TRIP10 1079 1.675 - - - - - 0.772 - 0.903 -
23. afap1 ENSDARG00000055284 730 1.673 - 0.817 - - - 0.856 - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
24. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 1.668 - - - - - 0.744 - 0.924 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
25. nudt5 ENSDARG00000078073 779 1.666 - 0.871 - - - - 0.795 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
26. dbnla ENSDARG00000008170 2129 1.665 - - - - - 0.809 - 0.856 - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
27. soul3 ENSDARG00000102257 939 1.663 0.804 0.859 - - - - - - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
28. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 1.66 - 0.837 - - - 0.823 - - - coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
29. acat1 ENSDARG00000045888 1488 1.658 - 0.848 - - - 0.810 - - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
30. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.657 - - - - 0.767 - - 0.890 - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
31. tjp3 ENSDARG00000002909 1978 1.654 - - - - - 0.801 0.853 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
32. slc48a1b ENSDARG00000026109 1427 1.65 - 0.862 - - - - 0.788 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
33. tmem259 ENSDARG00000060442 1141 1.649 - 0.810 - - - - - 0.839 - transmembrane protein 259 [Source:ZFIN;Acc:ZDB-GENE-080225-14]
34. eml2 ENSDARG00000008808 706 1.646 - 0.838 - - - 0.808 - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
35. msxd msxd 1750 1.645 0.773 - - - - 0.872 - - -
36. IL17RD ENSDARG00000098359 2309 1.641 - - - - - 0.801 0.840 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
37. CACHD1 ENSDARG00000061590 1287 1.64 - - - - - 0.704 - 0.936 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
38. dusp7 ENSDARG00000101413 1307 1.637 - - - - - 0.800 0.837 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
39. fam105bb fam105bb 1253 1.635 - 0.861 - - - 0.774 - - -
40. PRSS16 ENSDARG00000076602 963 1.634 - 0.909 - - - - 0.725 - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
41. myh14 ENSDARG00000073732 502 1.63 - 0.847 - - - 0.783 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
42. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.629 - 0.849 - - - 0.780 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
43. ttpa ENSDARG00000027584 640 1.629 - 0.725 - - - - - 0.904 - tocopherol (alpha) transfer protein [Source:ZFIN;Acc:ZDB-GENE-030131-4631]
44. C2CD2 ENSDARG00000105000 2573 1.628 0.820 - - - - 0.808 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
45. sowahcb ENSDARG00000059582 178 1.627 - 0.841 - - - 0.786 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
46. cyp2v1 ENSDARG00000018485 694 1.626 - 0.915 - - - - 0.711 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
47. cmasb 499 1.619 - 0.867 - - - 0.752 - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
48. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.619 - 0.855 0.764 - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
49. zdhhc9 ENSDARG00000060515 981 1.614 - 0.911 - - - 0.703 - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
50. eppk1 ENSDARG00000096359 4315 1.613 - 0.818 - - - 0.795 - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
51. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.613 - - - - - 0.817 0.796 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
52. si:ch211-105d18.6 si:ch211-105d18.6 59 1.608 - 0.873 - - - 0.735 - - -
53. arhgef16 ENSDARG00000077114 759 1.605 - 0.787 - - - - - 0.818 - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
54. GK2 GK2 813 1.602 0.755 - - - - - 0.847 - -
55. cdc20 ENSDARG00000100741 3264 1.601 - 0.776 - - - 0.825 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
56. ppil1 ENSDARG00000015422 1353 1.601 - - - - - 0.782 0.819 - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
57. efna5a ENSDARG00000089790 1007 1.601 - 0.804 - - - - - 0.797 - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
58. rab11al ENSDARG00000014340 2116 1.601 - 0.831 - - - 0.770 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
59. si:ch211-232i5.3 ENSDARG00000086874 1256 1.6 - 0.776 - - - 0.824 - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
60. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.592 - 0.853 - - - 0.739 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
61. paip2b ENSDARG00000008706 4255 1.578 - - - - - - 0.831 - 0.747 poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
62. oafa ENSDARG00000075851 2015 1.578 - - - - 0.745 - - 0.833 - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
63. lsg1 ENSDARG00000015352 812 1.577 - 0.804 - - - - 0.773 - - large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]
64. tbl1xr1b ENSDARG00000008966 2203 1.575 - 0.847 - - - 0.728 - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
65. si:dkey-240e12.6 ENSDARG00000110137 674 1.574 - 0.839 - - - 0.735 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
66. arhgef4 ENSDARG00000012914 1464 1.571 - - - - - - 0.723 0.848 - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
67. slc39a7 ENSDARG00000104451 6368 1.567 - 0.719 - - - 0.848 - - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
68. krt1-19d ENSDARG00000023082 902 1.566 - - - - - 0.773 0.793 - - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
69. trim55b ENSDARG00000058158 586 1.562 - - - - - 0.705 - 0.857 - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
70. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.561 - 0.843 - - - 0.718 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
71. fosb ENSDARG00000055751 170 1.561 - 0.825 - - - 0.736 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
72. OLFM4_1 OLFM4_1 213 1.56 - - - - - - 0.733 0.827 -
73. RBMS1 RBMS1 258 1.557 - 0.822 - - - 0.735 - - -
74. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.557 0.828 0.729 - - - - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
75. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.556 - 0.710 - - - 0.846 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
76. ccbl1 702 1.55 - - 0.769 - - - 0.781 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
77. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.547 - - 0.812 - - 0.735 - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
78. CARKD 1398 1.546 - 0.706 - - - 0.840 - - - carbohydrate kinase domain containing, transcript variant X7
79. proc proc 1038 1.544 0.784 0.760 - - - - - - -
80. haus7 ENSDARG00000037432, ENSDARG00000112118 820 1.539 - - - - - - 0.759 0.780 - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
81. mctp2a ENSDARG00000001414 307 1.529 - - - - - 0.781 0.748 - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
82. ptbp2a ENSDARG00000101947 1921 1.528 - 0.763 - - - - 0.765 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
83. tmem50a ENSDARG00000015757 3244 1.527 - 0.755 - - - 0.772 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
84. elovl6l ENSDARG00000038639 1184 1.522 - 0.706 - - - 0.816 - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
85. nrm ENSDARG00000063690 1371 1.518 - - - - - 0.799 0.719 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
86. pip5k1ab ENSDARG00000024642 1988 1.514 - - - - - 0.773 - 0.741 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
87. capn8 ENSDARG00000055715, ENSDARG00000111228 497 1.513 - - - - - 0.793 0.720 - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
88. si:dkey-169i5.4 ENSDARG00000077862 511 1.51 - - - - - 0.723 0.787 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
89. jak2a ENSDARG00000104808 1658 1.503 - - - - - - 0.803 0.700 - Janus kinase 2a [Source:ZFIN;Acc:ZDB-GENE-980526-481]
90. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.498 - - 0.708 - - - 0.790 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
91. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.494 - 0.790 - - - - - 0.704 - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
92. setd8b 2528 1.492 - 0.759 - - - 0.733 - - - SET domain containing (lysine methyltransferase) 8b
93. NUDT12 ENSDARG00000100813 378 1.488 - 0.772 0.716 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
94. TESK1_1 TESK1_1 276 1.488 - - - - - 0.755 - 0.733 -
95. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.488 - - - - - 0.770 - 0.718 - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
96. si:ch211-113e8.10 ENSDARG00000079631 498 1.482 - 0.777 - - - - 0.705 - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
97. ufc1 ENSDARG00000022340 2618 1.48 - 0.702 - - - 0.778 - - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
98. SLC22A16 ENSDARG00000015869 1086 1.479 - - - - - 0.737 0.742 - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
99. insra ENSDARG00000011948 1258 1.475 - 0.771 0.704 - - - - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
100. itgb4 ENSDARG00000028507 2568 1.475 - 0.746 - - - 0.729 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]

There are 1759 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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