Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAPGEF5

Gene Name Gene ID Reads Annotation
RAPGEF5 ENSGALG00000034024 1264 Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]











Genes with expression patterns similar to RAPGEF5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAPGEF5 ENSGALG00000034024 1264 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
2. PLEKHM1 ENSGALG00000000201 1300 1.449 - - - - - - 0.739 - - 0.710 pleckstrin homology and RUN domain containing M1 [Source:NCBI gene;Acc:419939]
3. WBP2NL ENSGALG00000011908 23 0.952 - - - - - - 0.952 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
4. C8G ENSGALG00000040644 443 0.951 - - - - - - 0.951 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
5. ENSGALG00000003817 ENSGALG00000003817 45 0.946 - - - - - - 0.946 - - -
6. ZC3H12C ENSGALG00000017154 59 0.946 - - - - - - 0.946 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
7. UBAC2 ENSGALG00000016880 1343 0.946 - - - - - - 0.946 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
8. CFH ENSGALG00000002431 31 0.946 - - - - - - 0.946 - - - complement factor H, transcript variant X1
9. NCBP2 ENSGALG00000006843 938 0.943 - - - - - - 0.943 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
10. NBEAL2 ENSGALG00000039120 277 0.943 - - - - - - 0.943 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
11. ADAMTSL1 1479 0.943 - - - - - - 0.943 - - - ADAMTS like 1, transcript variant X3
12. SKI ENSGALG00000001229 50 0.941 - - - - - - 0.941 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
13. CTSB ENSGALG00000030016 177 0.941 - - - - - - 0.941 - - - cathepsin B [Source:NCBI gene;Acc:396329]
14. ZFHX4 ENSGALG00000037164 811 0.94 - - - - - - 0.940 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
15. TRPC6 ENSGALG00000029416 281 0.94 - - - - - - 0.940 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
16. TFAP2C ENSGALG00000007690 768 0.938 - - - - - - 0.938 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
17. GPSM2 ENSGALG00000002090 50 0.938 - - - - - - 0.938 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
18. TMEM150C ENSGALG00000011175 218 0.935 - - - - - - 0.935 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
19. RALGAPA2 240 0.934 - - - - - - 0.934 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
20. CCDC117 ENSGALG00000005784 185 0.932 - - - - - - 0.932 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
21. MICAL3 ENSGALG00000013042 90 0.928 - - - - - - 0.928 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
22. ARHGAP20 ENSGALG00000017150 100 0.928 - - - - - - 0.928 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
23. NPY2R ENSGALG00000009280 29 0.925 - - - - - - 0.925 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
24. SLC27A6 ENSGALG00000000184 98 0.924 - - - - - - 0.924 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
25. CCDC135 CCDC135 220 0.923 - - - - - - 0.923 - - -
26. TM2D1 ENSGALG00000020614 764 0.919 - - - - - - 0.919 - - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
27. SLC5A11 ENSGALG00000005933 28 0.918 - - - - - - 0.918 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
28. SNX16 ENSGALG00000029678 1104 0.917 - - - - - - 0.917 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
29. CPE ENSGALG00000027788 153 0.917 - - - - - - 0.917 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
30. SCN9A ENSGALG00000027793 161 0.913 - - - - - - 0.913 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
31. CVG1 CVG1 636 0.912 - - - - - - 0.912 - - -
32. PLXNB2 ENSGALG00000039861 338 0.911 - - - - - - 0.911 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
33. OSBPL2 ENSGALG00000005195 94 0.906 - - - - - - 0.906 - - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
34. MAN1B1 ENSGALG00000037375 308 0.905 - - - - - - 0.905 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
35. CNTN1 ENSGALG00000009523 158 0.901 - - - - - - 0.901 - - - contactin 1 [Source:NCBI gene;Acc:417786]
36. DTNBP1 ENSGALG00000012703 539 0.901 - - - - - - 0.901 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
37. FAM47E-STBD1 FAM47E-STBD1 1148 0.901 - - - - - - 0.901 - - -
38. TMEM248 ENSGALG00000033954 248 0.892 - - - - - - 0.892 - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
39. NOL8 ENSGALG00000004750 1433 0.891 - - - - - - 0.891 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
40. MPP2 ENSGALG00000035580 383 0.891 - - - - - - 0.891 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
41. GABRG2 ENSGALG00000038042 211 0.891 - - - - - - 0.891 - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
42. MPZL3 ENSGALG00000021271 1857 0.89 - - - - - - 0.890 - - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
43. PCYOX1L ENSGALG00000040340 2162 0.888 - - - - - - 0.888 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
44. CKV1.1 CKV1.1 140 0.887 - - - - - - 0.887 - - -
45. IMPAD1 ENSGALG00000041573 801 0.887 - - - - - - 0.887 - - - inositol monophosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26019]
46. DHX35 ENSGALG00000003658 1090 0.885 - - - - - - 0.885 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
47. WDR59 ENSGALG00000002798 815 0.884 - - - - - - 0.884 - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
48. NMT2 ENSGALG00000008791 542 0.884 - - - - - - 0.884 - - - N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]
49. C5NT1AL ENSGALG00000006608 277 0.884 - - - - - - 0.884 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
50. PYGO1 ENSGALG00000004369 527 0.883 - - - - - - 0.883 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
51. CSNK1A1 495 0.883 - - - - - - 0.883 - - - casein kinase 1 alpha 1, transcript variant X4
52. CCK ENSGALG00000029788 213 0.883 - - - - - - 0.883 - - - cholecystokinin [Source:NCBI gene;Acc:414884]
53. FICD ENSGALG00000004858 171 0.882 - - - - - - 0.882 - - - FIC domain containing [Source:HGNC Symbol;Acc:HGNC:18416]
54. NALCN ENSGALG00000016868 164 0.882 - - - - - - 0.882 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
55. PLEK2 ENSGALG00000009562 706 0.882 - - - - - - 0.882 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
56. ENSGALG00000005895 ENSGALG00000005895 889 0.88 - - - - - - 0.880 - - -
57. BAI3 BAI3 106 0.878 - - - - - - 0.878 - - -
58. SHC2 ENSGALG00000001289 2140 0.876 - - - - - - 0.876 - - - SHC (Src homology 2 domain containing) transforming protein 2, transcript variant X2
59. IMMP2L ENSGALG00000027876 962 0.872 - - - - - - 0.872 - - - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
60. KCNK1 ENSGALG00000011005 1643 0.871 - - - - - - 0.871 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
61. EPHB1 ENSGALG00000006609 346 0.868 - - - - - - 0.868 - - - EPH receptor B1, transcript variant X2
62. ATG2B ENSGALG00000042088 918 0.867 - - - - - - 0.867 - - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
63. RIMKLB ENSGALG00000040184 281 0.867 - - - - - - 0.867 - - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
64. VPS37B ENSGALG00000003743 185 0.863 - - - - - - 0.863 - - - VPS37B, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:25754]
65. DDX46 ENSGALG00000006404 8765 0.863 - - - - - - 0.863 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
66. SDCCAG3 1208 0.863 - - - - - - 0.863 - - - serologically defined colon cancer antigen 3
67. DENND1A ENSGALG00000001157 503 0.861 - - - - - - 0.861 - - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
68. OSTM1 ENSGALG00000015306 192 0.86 - - - - - - 0.860 - - - osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
69. ENSGALG00000027927 ENSGALG00000027927 654 0.859 - - - - - - 0.859 - - -
70. SRSF1 ENSGALG00000005525 4376 0.856 - - - - - - 0.856 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
71. FAM91A1 ENSGALG00000035478 266 0.855 - - - - - - 0.855 - - - family with sequence similarity 91 member A1 [Source:HGNC Symbol;Acc:HGNC:26306]
72. SCUBE2 ENSGALG00000032161 63 0.855 - - - - - - 0.855 - - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
73. QARS ENSGALG00000029980 4207 0.854 - - - - - - 0.854 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
74. ECHDC1 ENSGALG00000014828 958 0.853 - - - - - - 0.853 - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
75. ENSGALG00000020883 ENSGALG00000020883 299 0.851 - - - - - - 0.851 - - -
76. COPS7B ENSGALG00000007752 1588 0.848 - - - - - - 0.848 - - - COP9 signalosome subunit 7B [Source:HGNC Symbol;Acc:HGNC:16760]
77. RTN4RL2 ENSGALG00000032903 809 0.848 - - - - - - 0.848 - - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
78. PKP1 ENSGALG00000000299 155 0.846 - - - - - - 0.846 - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
79. ILDR1 ENSGALG00000015136 306 0.844 - - - - - - 0.844 - - - immunoglobulin like domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:28741]
80. CHGA ENSGALG00000010820 1028 0.843 - - - - - - 0.843 - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
81. CREBL2 ENSGALG00000037030 1247 0.841 - - - - - - 0.841 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
82. COL12A1 ENSGALG00000015908 1300 0.841 - - - - - - 0.841 - - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
83. DPYSL4 ENSGALG00000010490 3431 0.84 - - - - - - 0.840 - - - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
84. DPM2 ENSGALG00000005066 9121 0.84 - - - - - - 0.840 - - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
85. Mar-06 Mar-06 1218 0.838 - - - - - - 0.838 - - -
86. C3H6ORF154 C3H6ORF154 1078 0.837 - - - - - - 0.837 - - -
87. CACTIN ENSGALG00000024391 1408 0.834 - - - - - - 0.834 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
88. AP1S2 ENSGALG00000016551 421 0.828 - - - - - - 0.828 - - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
89. GPR180 ENSGALG00000016897 1545 0.824 - - - - - - 0.824 - - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
90. RDX ENSGALG00000017153 6734 0.823 - - - - - - 0.823 - - - radixin [Source:NCBI gene;Acc:395511]
91. ARHGAP18 ENSGALG00000031843 2117 0.822 - - - - - - 0.822 - - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
92. LUZP1 ENSGALG00000025858 947 0.822 - - - - - - 0.822 - - - leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
93. MN1 ENSGALG00000026119 1808 0.822 - - - - - - 0.822 - - - MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]
94. CAPRIN1 ENSGALG00000013532 1699 0.821 - - - - - - 0.821 - - - cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
95. CKB ENSGALG00000011511 2100 0.82 - - - - - - 0.820 - - - creatine kinase B [Source:NCBI gene;Acc:396248]
96. C26H6ORF89 C26H6ORF89 1826 0.82 - - - - - - 0.820 - - -
97. RNF121 ENSGALG00000000868 452 0.818 - - - - - - 0.818 - - - ring finger protein 121 [Source:HGNC Symbol;Acc:HGNC:21070]
98. METRN ENSGALG00000035634 1871 0.817 - - - - - - 0.817 - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
99. DEPDC7 ENSGALG00000011681 1181 0.817 - - - - - - 0.817 - - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
100. CREG1 ENSGALG00000040426 1188 0.815 - - - - - - 0.815 - - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA