Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAPGEF4-AS1

Gene Name Gene ID Reads Annotation
RAPGEF4-AS1 ENSG00000228016 4 RAPGEF4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28081]



Genes with expression patterns similar to RAPGEF4-AS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RAPGEF4-AS1 ENSG00000228016 4 2 1.000 1.000 RAPGEF4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28081]
2. LOC103091866 3 1 1.000 - uncharacterized LOC103091866, transcript variant 5
3. OR4K2 ENSG00000165762 3 1 1.000 - olfactory receptor family 4 subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:14728]
4. PRKACG ENSG00000165059 3 1 1.000 - protein kinase cAMP-activated catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:9382]
5. EXOC3L1 ENSG00000179044 12 1 1.000 - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
6. LOC101927285 3 1 1.000 - uncharacterized LOC101927285
7. LOC284080 6 1 1.000 - uncharacterized LOC284080
8. LOC101928063 5 1 1.000 - uncharacterized LOC101928063
9. ATP6V1G3 ENSG00000151418, ENSG00000263014 3 1 1.000 - ATPase H+ transporting V1 subunit G3 [Source:HGNC Symbol;Acc:HGNC:18265]
10. GSTA7P ENSG00000237674 3 1 1.000 - glutathione S-transferase alpha 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:4631]
11. GPR87 ENSG00000138271 5 1 1.000 - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
12. KRT23 ENSG00000108244, ENSG00000263309 11 1 1.000 - keratin 23 [Source:HGNC Symbol;Acc:HGNC:6438]
13. CLEC4C ENSG00000198178 7 1 1.000 - C-type lectin domain family 4 member C [Source:HGNC Symbol;Acc:HGNC:13258]
14. HSD17B3 ENSG00000130948 2 1 - 1.000 hydroxysteroid 17-beta dehydrogenase 3 [Source:HGNC Symbol;Acc:HGNC:5212]
15. LOC101927827 7 0.995 - 0.995 uncharacterized LOC101927827
16. LINC01366 ENSG00000235172 5 0.995 - 0.995 long intergenic non-protein coding RNA 1366 [Source:HGNC Symbol;Acc:HGNC:27416]
17. TTTY11 ENSG00000180910 1 0.995 - 0.995 testis-specific transcript, Y-linked 11 [Source:HGNC Symbol;Acc:HGNC:18492]
18. CACNG5 ENSG00000075429 1 0.995 - 0.995 calcium voltage-gated channel auxiliary subunit gamma 5 [Source:HGNC Symbol;Acc:HGNC:1409]
19. ALPI ENSG00000163295 4 0.995 - 0.995 alkaline phosphatase, intestinal [Source:HGNC Symbol;Acc:HGNC:437]
20. TCP10L2 ENSG00000166984 1 0.995 - 0.995 t-complex 10 like 2 [Source:HGNC Symbol;Acc:HGNC:21254]
21. GAGE1 ENSG00000205777 1 0.995 - 0.995 G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098]
22. SMIM22 ENSG00000267795 3 0.995 - 0.995 small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
23. CYP2G1P ENSG00000130612 1 0.995 - 0.995 cytochrome P450 family 2 subfamily G member 1, pseudogene [Source:HGNC Symbol;Acc:HGNC:2633]
24. ADGRE3 ENSG00000131355 4 0.995 - 0.995 adhesion G protein-coupled receptor E3 [Source:HGNC Symbol;Acc:HGNC:23647]
25. COL18A1-AS1 ENSG00000183535 1 0.995 - 0.995 COL18A1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:23132]
26. ZCCHC5 1 0.995 - 0.995 zinc finger CCHC-type containing 5
27. S1PR4 ENSG00000125910 2 0.995 - 0.995 sphingosine-1-phosphate receptor 4 [Source:HGNC Symbol;Acc:HGNC:3170]
28. PLAC4 ENSG00000280109 6 0.995 - 0.995 placenta specific 4 [Source:HGNC Symbol;Acc:HGNC:14616]
29. FBXL8 ENSG00000135722 1 0.995 - 0.995 F-box and leucine rich repeat protein 8 [Source:HGNC Symbol;Acc:HGNC:17875]
30. LINC00319 ENSG00000188660 7 0.995 - 0.995 long intergenic non-protein coding RNA 319 [Source:HGNC Symbol;Acc:HGNC:19730]
31. MRS2P2 10 0.991 - 0.991 MRS2 pseudogene 2
32. LOC284344 7 0.991 - 0.991 uncharacterized LOC284344
33. PRR18 ENSG00000176381 2 0.984 - 0.984 proline rich 18 [Source:HGNC Symbol;Acc:HGNC:28574]
34. LOC101927768 14 0.971 0.971 - uncharacterized LOC101927768
35. FCRL4 ENSG00000163518 2 0.97 - 0.970 Fc receptor like 4 [Source:HGNC Symbol;Acc:HGNC:18507]
36. LOC286190 LOC286190 11 0.968 0.968 -
37. MIF-AS1 ENSG00000218537, ENSG00000281335 5 0.96 - 0.960 MIF antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27669]
38. HCG25 ENSG00000224096, ENSG00000231037, ENSG00000231343, ENSG00000231573, ENSG00000232940, ENSG00000233772, ENSG00000238064 1 0.948 - 0.948 HLA complex group 25 [Source:HGNC Symbol;Acc:HGNC:20196]
39. SNORA19 ENSG00000207468 129 0.941 0.941 - small nucleolar RNA, H/ACA box 19 [Source:HGNC Symbol;Acc:HGNC:32609]
40. CCDC129 5 0.937 - 0.937 coiled-coil domain containing 129, transcript variant X3
41. HMGA1P7 ENSG00000216753 1 0.936 - 0.936 high mobility group AT-hook 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:19122]
42. FAM95B1 ENSG00000223839 3 0.927 - 0.927 family with sequence similarity 95 member B1 [Source:HGNC Symbol;Acc:HGNC:32318]
43. FMNL1 ENSG00000184922 10 0.925 0.925 - formin like 1 [Source:HGNC Symbol;Acc:HGNC:1212]
44. FRMPD1 ENSG00000070601 8 0.924 0.924 - FERM and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29159]
45. RANBP3L ENSG00000164188 7 0.924 0.924 - RAN binding protein 3 like [Source:HGNC Symbol;Acc:HGNC:26353]
46. MUC4 ENSG00000145113, ENSG00000273822, ENSG00000273984, ENSG00000275164, ENSG00000276613, ENSG00000277585, ENSG00000278303, ENSG00000278468 5 0.92 - 0.920 mucin 4, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7514]
47. F11-AS1 ENSG00000251165 5 0.918 - 0.918 F11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27725]
48. GSTM1 ENSG00000134184 2 0.909 - 0.909 glutathione S-transferase mu 1 [Source:HGNC Symbol;Acc:HGNC:4632]
49. Sep-12 Sep-12 20 0.903 0.903 -
50. MYADML2 ENSG00000185105 8 0.903 - 0.903 myeloid associated differentiation marker like 2 [Source:HGNC Symbol;Acc:HGNC:34548]
51. HNF1A ENSG00000135100 4 0.899 0.899 - HNF1 homeobox A [Source:HGNC Symbol;Acc:HGNC:11621]
52. MGC32805 ENSG00000250328 1 0.892 - 0.892 uncharacterized LOC153163 [Source:NCBI gene;Acc:153163]
53. LOC101929116 4 0.891 0.891 - uncharacterized LOC101929116
54. MYPN ENSG00000138347 25 0.891 0.891 - myopalladin [Source:HGNC Symbol;Acc:HGNC:23246]
55. TMIE ENSG00000181585 18 0.889 0.889 - transmembrane inner ear [Source:HGNC Symbol;Acc:HGNC:30800]
56. LINC00348 ENSG00000226846 31 0.887 0.887 - long intergenic non-protein coding RNA 348 [Source:HGNC Symbol;Acc:HGNC:42658]
57. MT1DP ENSG00000205361 4 0.883 0.883 - metallothionein 1D, pseudogene [Source:HGNC Symbol;Acc:HGNC:7396]
58. DLX6 ENSG00000006377 2 0.877 - 0.877 distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]
59. H2BFWT ENSG00000123569 6 0.875 0.875 - H2B histone family member W, testis specific [Source:HGNC Symbol;Acc:HGNC:27252]
60. HEXA-AS1 ENSG00000260339 9 0.862 - 0.862 HEXA antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:25810]
61. PTPN22 ENSG00000134242 5 0.861 - 0.861 protein tyrosine phosphatase, non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]
62. GPR78 ENSG00000155269 2 0.86 - 0.860 G protein-coupled receptor 78 [Source:HGNC Symbol;Acc:HGNC:4528]
63. LOC101928650 2 0.854 - 0.854 uncharacterized LOC101928650
64. LOC101927045 26 0.851 0.851 - uncharacterized LOC101927045
65. LINC00602 ENSG00000281832 4 0.85 - 0.850 long intergenic non-protein coding RNA 602 [Source:HGNC Symbol;Acc:HGNC:43917]
66. C11orf53 ENSG00000150750 10 0.849 0.849 - chromosome 11 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:30527]
67. ATP13A5 ENSG00000187527 3 0.844 - 0.844 ATPase 13A5 [Source:HGNC Symbol;Acc:HGNC:31789]
68. GRM7 ENSG00000196277 15 0.839 0.839 - glutamate metabotropic receptor 7 [Source:HGNC Symbol;Acc:HGNC:4599]
69. ZNF878 ENSG00000257446 2 0.835 - 0.835 zinc finger protein 878 [Source:HGNC Symbol;Acc:HGNC:37246]
70. VLDLR-AS1 ENSG00000236404 53 0.835 0.835 - VLDLR antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49621]
71. ETV7 ENSG00000010030 37 0.806 0.806 - ETS variant 7 [Source:HGNC Symbol;Acc:HGNC:18160]
72. LOC101927051 9 0.804 0.804 - uncharacterized LOC101927051
73. TLR8-AS1 ENSG00000233338 24 0.802 0.802 - TLR8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40720]
74. DSG4 ENSG00000175065 4 0.802 - 0.802 desmoglein 4 [Source:HGNC Symbol;Acc:HGNC:21307]
75. CERS3 ENSG00000154227 6 0.802 0.802 - ceramide synthase 3 [Source:HGNC Symbol;Acc:HGNC:23752]
76. LOC101927572 14 0.798 0.798 - uncharacterized LOC101927572
77. LOC79160 4 0.796 - 0.796 uncharacterized LOC79160
78. PLEKHA8P1 ENSG00000134297 109 0.794 0.794 - pleckstrin homology domain containing A8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:30222]
79. AIRN ENSG00000268257 9 0.785 0.785 - antisense of IGF2R non-protein coding RNA [Source:HGNC Symbol;Acc:HGNC:34515]
80. ADRA2B ENSG00000274286 27 0.78 0.780 - adrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]
81. RIPPLY2 ENSG00000203877 5 0.779 - 0.779 ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
82. CDK15 ENSG00000138395 37 0.774 0.774 - cyclin dependent kinase 15 [Source:HGNC Symbol;Acc:HGNC:14434]
83. MUC3A ENSG00000169894 16 0.765 - 0.765 mucin 3A, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7513]
84. LEP ENSG00000174697 7 0.764 0.764 - leptin [Source:HGNC Symbol;Acc:HGNC:6553]
85. LHFPL5 ENSG00000197753 5 0.762 - 0.762 LHFPL tetraspan subfamily member 5 [Source:HGNC Symbol;Acc:HGNC:21253]
86. LINC00922 ENSG00000261742 7 0.762 0.762 - long intergenic non-protein coding RNA 922 [Source:HGNC Symbol;Acc:HGNC:27545]
87. MZB1 ENSG00000170476 2 0.757 - 0.757 marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
88. LOC645513 21 0.753 - 0.753 septin 7 pseudogene
89. HOTAIR ENSG00000228630 10 0.747 0.747 - HOX transcript antisense RNA [Source:HGNC Symbol;Acc:HGNC:33510]
90. LINC00961 18 0.746 0.746 - long intergenic non-protein coding RNA 961
91. LOC101926941 7 0.745 - 0.745 uncharacterized LOC101926941
92. LINC01242 ENSG00000280683 2 0.745 - 0.745 long intergenic non-protein coding RNA 1242 [Source:HGNC Symbol;Acc:HGNC:49810]
93. FGF20 ENSG00000078579 7 0.74 0.740 - fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677]
94. LINC-ROR ENSG00000258609 4 0.736 - 0.736 long intergenic non-protein coding RNA, regulator of reprogramming [Source:HGNC Symbol;Acc:HGNC:43773]
95. PRSS45 ENSG00000188086 6 0.734 - 0.734 serine protease 45 [Source:HGNC Symbol;Acc:HGNC:30717]
96. C10orf99 ENSG00000188373 5 0.73 0.730 - chromosome 10 open reading frame 99 [Source:HGNC Symbol;Acc:HGNC:31428]
97. BNIPL ENSG00000163141 30 0.73 - 0.730 BCL2 interacting protein like [Source:HGNC Symbol;Acc:HGNC:16976]
98. FAM188B 3 0.727 - 0.727 family with sequence similarity 188 member B
99. MYBBP1A ENSG00000132382 6 0.723 - 0.723 MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
100. RBM46 ENSG00000151962 40 0.723 0.723 - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA