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Results for RAPGEF4

Gene Name Gene ID Reads Annotation
RAPGEF4 ENSDARG00000079872 82 Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]










Genes with expression patterns similar to RAPGEF4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RAPGEF4 ENSDARG00000079872 82 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
2. slc1a1 ENSDARG00000020212 104 2.534 0.811 - 0.780 - - - - 0.943 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
3. BX957322.2 ENSDARG00000095302 68 2.444 0.885 - 0.776 - - 0.783 - - -
4. elavl4 ENSDARG00000045639 998 2.328 0.751 0.794 - - - 0.783 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
5. b3gat2 ENSDARG00000030733 348 2.323 0.723 - - - - 0.782 - 0.818 - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
6. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 2.25 0.715 - - - - 0.756 - 0.779 - microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
7. hbaa2 ENSDARG00000069735 10 2 - 1.000 - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
8. fam219b ENSDARG00000104637 3 2 - 1.000 - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
9. zgc:66455 ENSDARG00000052375 3 2 - 1.000 - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
10. b3galtlb b3galtlb 27 1.984 - - - - - - 1.000 0.984 -
11. st6gal1 ENSDARG00000044514 142 1.981 0.981 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
12. GADD45G_1 GADD45G_1 236 1.961 - 1.000 - - - 0.961 - - -
13. FAXC FAXC 102 1.95 - 1.000 - - - 0.950 - - -
14. pcyt1ba ENSDARG00000058162 206 1.934 - 1.000 - - - 0.934 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
15. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.903 0.903 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
16. CAMSAP3 ENSDARG00000059475 263 1.883 0.947 - - - - 0.936 - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
17. fez1 ENSDARG00000023174 701 1.882 0.882 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
18. fam184a ENSDARG00000014081 93 1.87 - - - - - 0.911 - 0.959 - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
19. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1.87 - - 0.870 - - - 1.000 - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
20. ATP6AP1L ATP6AP1L 164 1.861 - - - - - 0.885 - 0.976 -
21. scg2b ENSDARG00000038574 345 1.849 0.849 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
22. GALNT9 ENSDARG00000006832 120 1.839 - - - - - 0.863 - 0.976 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
23. CELA1_1 CELA1_1 104 1.836 - - 0.845 - - - - 0.991 -
24. LMTK3 LMTK3 222 1.832 - 1.000 - - - 0.832 - - -
25. sez6l ENSDARG00000100594 35 1.827 - 1.000 - - - 0.827 - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
26. rpap2 ENSDARG00000038397 118 1.818 - 0.884 - - - 0.934 - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
27. Mar-09 Mar-09 126 1.815 - - - - - 0.887 - 0.928 -
28. tbx16 ENSDARG00000007329 255 1.813 - - - - - 0.862 - 0.951 - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
29. BSN BSN 463 1.81 0.902 - - - - 0.908 - - -
30. evx2 ENSDARG00000059255 317 1.806 0.885 - - - - 0.921 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
31. dbx2 2971 1.803 0.916 - - - - 0.887 - - - developing brain homeobox 2
32. cacng2a ENSDARG00000032565 99 1.803 0.803 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
33. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.803 0.883 - - - - 0.920 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
34. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.803 - 0.865 - - - 0.938 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
35. bhlhe22 ENSDARG00000058039 1673 1.799 0.845 0.954 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
36. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.795 - 1.000 - - - 0.795 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
37. si:dkey-71h2.2 ENSDARG00000043394 11 1.793 0.793 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
38. znf687b ENSDARG00000019299 71 1.781 0.831 - - - - - 0.950 - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
39. rassf4 ENSDARG00000012460 43 1.777 0.777 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
40. sycp2 ENSDARG00000088950 3 1.777 0.777 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
41. ripply2 ENSDARG00000070535 18 1.777 0.777 - - - - - 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
42. cyp27a7 ENSDARG00000033802 216 1.777 0.777 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
43. si:ch73-94f11.5 si:ch73-94f11.5 6 1.775 - 1.000 - - - 0.775 - - -
44. purg ENSDARG00000099187, ENSDARG00000114450 33 1.775 - - - - - 0.775 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
45. GAS2 18 1.775 - 1.000 - - - 0.775 - - - growth arrest specific 2, transcript variant X1
46. ZNF337_16 ZNF337_16 22 1.775 - 1.000 - - - 0.775 - - -
47. BX005294.2 ENSDARG00000109361 3 1.775 - 1.000 - - - 0.775 - - -
48. CR847990.1 CR847990.1 21 1.773 0.777 - - - - 0.996 - - -
49. sncgb ENSDARG00000109715 1014 1.773 0.948 - - - - - - 0.825 - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
50. LINGO2 LINGO2 300 1.77 - 0.880 - - - - - 0.890 -
51. cpa2 ENSDARG00000010146 28 1.769 0.777 - - - - - - 0.992 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
52. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1.769 0.777 - - - - - - 0.992 - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
53. KCNAB2 KCNAB2 129 1.765 0.802 - - - - - - 0.963 -
54. npy8br ENSDARG00000005780 15 1.763 - - 0.916 - - - 0.847 - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
55. mad1l1 ENSDARG00000033852 464 1.76 0.874 - - - - - - 0.886 - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
56. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.76 0.760 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
57. grpr ENSDARG00000056620 66 1.754 0.777 - - - - - - 0.977 - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
58. si:dkey-193c22.1 ENSDARG00000093687 104 1.744 - 1.000 - - - 0.744 - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
59. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.732 0.940 - - - - 0.792 - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
60. grin2bb ENSDARG00000030376 60 1.732 - 1.000 - - - 0.732 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
61. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.727 0.793 - - - - 0.934 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
62. cdh18 cdh18 64 1.726 - 1.000 - - - 0.726 - - -
63. znf384l ENSDARG00000001015 137 1.725 0.777 - - - - - - 0.948 - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
64. sypb ENSDARG00000002230 262 1.722 0.885 - - - - 0.837 - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
65. glcea ENSDARG00000005095 33 1.721 0.777 - - - - 0.944 - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
66. gpr56 gpr56 523 1.721 - 0.823 - - - 0.898 - - -
67. PRR12 PRR12 38 1.712 - 1.000 - - - 0.712 - - -
68. atp1a3a ENSDARG00000018259 5393 1.707 0.908 - - - - 0.799 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
69. kcna1 kcna1 174 1.707 0.707 1.000 - - - - - - -
70. kcnd1 ENSDARG00000074746 153 1.706 0.923 - - - - 0.783 - - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
71. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1.705 0.777 - - - - - - 0.928 - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
72. nefmb ENSDARG00000043697 2052 1.705 0.884 - - - - 0.821 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
73. scn2b ENSDARG00000101713 796 1.702 0.876 - - - - 0.826 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
74. SMARCA4 ENSDARG00000104339 48 1.701 - 1.000 - - - 0.701 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
75. zgc:194665 ENSDARG00000004577 136 1.701 0.852 - - - - 0.849 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
76. SPOCK1 ENSDARG00000074644 794 1.69 0.887 - - - - 0.803 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
77. nadl1.1 1200 1.688 0.913 - - - - 0.775 - - - neural adhesion molecule L1.1, transcript variant X1
78. GJD2_1 GJD2_1 3045 1.688 0.945 - - - - 0.743 - - -
79. znf804a ENSDARG00000027079 121 1.683 0.872 - - - - 0.811 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
80. OXLD1 8 1.683 0.777 - 0.906 - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
81. ELFN1 ELFN1 59 1.683 - - - - - 0.712 - 0.971 -
82. syt12 ENSDARG00000101776 215 1.68 - - - - - 0.852 - 0.828 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
83. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.679 0.714 - - - - - - 0.965 - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
84. ints12 ENSDARG00000091678 3261 1.678 - - - - - 0.732 - 0.946 - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
85. adam8a ENSDARG00000001452 316 1.676 - - - - - - 0.965 0.711 - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
86. ksr2 ENSDARG00000094526 134 1.674 0.748 - - - - - - 0.926 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
87. ppp2r2c ppp2r2c 441 1.671 0.816 - - - - 0.855 - - -
88. ulk3 ENSDARG00000101661 69 1.67 0.885 - - - 0.785 - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
89. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.667 - 0.880 - - - 0.787 - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
90. CABZ01029822.1 ENSDARG00000086931 1654 1.664 0.855 - - - - 0.809 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
91. nhlh2 ENSDARG00000025495 1860 1.664 - 0.829 - - - 0.835 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
92. rims2b ENSDARG00000102690 275 1.663 - 0.875 - - - - - 0.788 - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
93. si:dkey-193i10.3 si:dkey-193i10.3 70 1.654 - 0.730 - - - - - 0.924 -
94. bgnb ENSDARG00000002945, ENSDARG00000110495 76 1.654 - - - - - 0.911 0.743 - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
95. snap25b ENSDARG00000058117 469 1.645 0.813 - - - - 0.832 - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
96. map1aa ENSDARG00000059601 599 1.643 0.815 - - - - 0.828 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
97. dapk3 ENSDARG00000074447 12 1.642 - 0.732 0.910 - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
98. rheb ENSDARG00000090213 1432 1.641 0.920 - - - - 0.721 - - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
99. scn1bb ENSDARG00000105003 239 1.636 0.720 - - - - 0.916 - - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
100. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.633 0.726 - - - - 0.907 - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]

There are 1766 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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