Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAPGEF2

Gene Name Gene ID Reads Annotation
RAPGEF2 ENSDARG00000005482 2068 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]










Genes with expression patterns similar to RAPGEF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RAPGEF2 ENSDARG00000005482 2068 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
2. ccdc22 ENSDARG00000052379 2276 1.988 - - - 0.999 - - 0.989 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
3. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.922 - - - 0.995 - - 0.927 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
4. greb1 ENSDARG00000070794 1741 1.839 - 0.842 - 0.997 - - - - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
5. sncb ENSDARG00000104945 8197 1.769 - 0.785 - 0.984 - - - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
6. cstf3 ENSDARG00000018904 6111 1.762 - - - 0.790 - - 0.972 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
7. fbrsl1 ENSDARG00000058232 885 1.748 - 0.758 - - - - 0.990 - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
8. cap1 ENSDARG00000016350 891 1.747 - 0.761 - - - - 0.986 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
9. ppib ENSDARG00000092798 21969 1.746 - - - 0.826 - - 0.920 - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
10. limch1b ENSDARG00000103774 1087 1.711 - 0.769 - - - - 0.942 - - LIM and calponin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9210]
11. zgc:77086 ENSDARG00000014015 4908 1.684 - 0.739 - - - - 0.945 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
12. SYDE2 ENSDARG00000099479 1891 1.559 0.766 - - - - 0.793 - - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
13. BX469922.1 BX469922.1 133 1.558 - 0.768 - - - - - 0.790 -
14. lysmd4 ENSDARG00000068702, ENSDARG00000113697 695 1.554 - - - - - 0.726 - 0.828 - LysM, putative peptidoglycan-binding, domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1895]
15. atp11a ENSDARG00000008413 742 1.473 - 0.752 - - - - - 0.721 - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
16. hdac4 ENSDARG00000098349 1370 1.44 - 0.712 - - - - - 0.728 - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
17. mbtps2 ENSDARG00000057577 1285 0.999 - - - 0.999 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
18. atat1 ENSDARG00000004472 700 0.999 - - - 0.999 - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
19. ppp2r5a ENSDARG00000027017 2397 0.999 - - - 0.999 - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
20. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 0.999 - - - 0.999 - - - - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
21. exosc8 ENSDARG00000068755 951 0.999 - - - 0.999 - - - - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
22. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.998 - - - 0.998 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
23. cbx3b ENSDARG00000092158 1976 0.998 - - - 0.998 - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
24. C13H9orf72 C13H9orf72 2310 0.998 - - - 0.998 - - - - -
25. rcc1 ENSDARG00000037158 1165 0.998 - - - 0.998 - - - - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
26. kdsr ENSDARG00000012021 1560 0.998 - - - 0.998 - - - - - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
27. ZNF628 1104 0.998 - - - 0.998 - - - - - zinc finger protein 628, transcript variant X3
28. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 0.998 - - - 0.998 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
29. angptl4 ENSDARG00000035859 2701 0.998 - - - 0.998 - - - - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
30. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.998 - - - 0.998 - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
31. usp4 ENSDARG00000014770 1684 0.998 - - - 0.998 - - - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
32. wu:fj13e08 1223 0.998 - - - 0.998 - - - - - wu:fj13e08
33. ip6k2 ip6k2 3926 0.997 - - - 0.997 - - - - -
34. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.997 - - - 0.997 - - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
35. mob3a ENSDARG00000019113 2551 0.997 - - - 0.997 - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
36. nin ENSDARG00000060298 1558 0.997 - - - 0.997 - - - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
37. lig3 ENSDARG00000052553 2665 0.997 - - - 0.997 - - - - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
38. rars ENSDARG00000054530 1495 0.997 - - - 0.997 - - - - - arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
39. creb1a ENSDARG00000053586 5068 0.997 - - - 0.997 - - - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
40. syf2 ENSDARG00000004706 2463 0.997 - - - 0.997 - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
41. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 0.997 - - - 0.997 - - - - - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
42. eppk1 ENSDARG00000096359 4315 0.997 - - - 0.997 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
43. hexb ENSDARG00000034368 3505 0.997 - - - 0.997 - - - - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
44. piezo1 ENSDARG00000076870 4704 0.997 - - - 0.997 - - - - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
45. ncoa4 ENSDARG00000021439 4581 0.997 - - - 0.997 - - - - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
46. napa napa 4444 0.996 - - - 0.996 - - - - -
47. ARFGAP1 ENSDARG00000101616 2952 0.996 - - - 0.996 - - - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
48. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 0.996 - - - 0.996 - - - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
49. elmod2 ENSDARG00000101669 3101 0.996 - - - 0.996 - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
50. thoc7 ENSDARG00000015394 3824 0.996 - - - 0.996 - - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
51. pinx1 ENSDARG00000023532 4452 0.996 - - - 0.996 - - - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
52. llgl2 ENSDARG00000023920 2617 0.996 - - - 0.996 - - - - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
53. atp1b3a ENSDARG00000015790 12310 0.995 - - - 0.995 - - - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
54. meis3 ENSDARG00000002795 2509 0.995 - - - 0.995 - - - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
55. lsm14ab ENSDARG00000100553 3837 0.995 - - - 0.995 - - - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
56. zgc:77262 ENSDARG00000044545 5563 0.995 - - - 0.995 - - - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
57. nt5c2b ENSDARG00000058231 3822 0.994 - - - 0.994 - - - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
58. cers2b ENSDARG00000058992 5319 0.993 - - - 0.993 - - - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
59. si:ch73-110p20.1 5932 0.993 - - - 0.993 - - - - - si:ch73-110p20.1
60. ndufa10 ENSDARG00000013333 6597 0.993 - - - 0.993 - - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
61. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 0.992 - - - 0.992 - - - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
62. vimp 4034 0.992 - - - 0.992 - - - - - VCP-interacting membrane selenoprotein
63. emc6 ENSDARG00000035282 4981 0.992 - - - 0.992 - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
64. SH3BGRL ENSDARG00000058302 4525 0.992 - - - 0.992 - - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
65. pdcd10b ENSDARG00000012591 3395 0.992 - - - - - - 0.992 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
66. taf10 ENSDARG00000068641 3333 0.992 - - - 0.992 - - - - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
67. phax ENSDARG00000044298 2302 0.992 - - - - - - 0.992 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
68. paip2b ENSDARG00000008706 4255 0.992 - - - 0.992 - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
69. srm ENSDARG00000055760 6572 0.992 - - - 0.992 - - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
70. gnl3 ENSDARG00000006219 3854 0.991 - - - - - - 0.991 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
71. nup98 ENSDARG00000074955 3998 0.991 - - - - - - 0.991 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
72. calub ENSDARG00000005115 1478 0.991 - - - - - - 0.991 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
73. COL22A1 COL22A1 4473 0.991 - - - 0.991 - - - - -
74. nucks1b ENSDARG00000012777 4468 0.991 - - - 0.991 - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
75. med14 ENSDARG00000009953 1383 0.991 - - - - - - 0.991 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
76. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.991 - - - - - - 0.991 - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
77. CNOT4 CNOT4 899 0.991 - - - - - - 0.991 - -
78. ripk1l ENSDARG00000006677 593 0.99 - - - - - - 0.990 - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
79. NBR1 NBR1 752 0.99 - - - - - - 0.990 - -
80. hdgfrp2 7462 0.99 - - - - - - 0.990 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
81. xpo1b ENSDARG00000063229 2529 0.99 - - - - - - 0.990 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
82. capn2b ENSDARG00000055592 5431 0.99 - - - 0.990 - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
83. rnf168 ENSDARG00000112483 594 0.989 - - - - - - 0.989 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
84. si:ch73-18b11.1 si:ch73-18b11.1 3840 0.989 - - - - - - 0.989 - -
85. pam ENSDARG00000100170 2442 0.989 - - - - - - 0.989 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
86. calcrlb ENSDARG00000011571 623 0.989 - - - - - - 0.989 - - calcitonin receptor-like b [Source:ZFIN;Acc:ZDB-GENE-080924-1]
87. nlk1 ENSDARG00000006566 1123 0.989 - - - - - - 0.989 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
88. fam3c ENSDARG00000056152 3833 0.989 - - - - - - 0.989 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
89. kmt2bb ENSDARG00000060697 5230 0.989 - - - - - - 0.989 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
90. tmem104 ENSDARG00000088560 859 0.988 - - - - - - 0.988 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
91. cdon ENSDARG00000061328 1441 0.988 - - - - - - 0.988 - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
92. timeless ENSDARG00000078497 1114 0.988 - - - - - - 0.988 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
93. si:ch211-51a6.2 ENSDARG00000030967 593 0.988 - - - - - - 0.988 - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
94. hs6st2 ENSDARG00000012025 1145 0.988 - - - - - - 0.988 - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]
95. ino80c ENSDARG00000055719 1512 0.988 - - - - - - 0.988 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
96. rassf1 ENSDARG00000004840 1248 0.988 - - - - - - 0.988 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
97. RAB38 122 0.988 - - - - - - 0.988 - - RAB38, member RAS oncogene family
98. hiat1a ENSDARG00000013117 607 0.988 - - - - - - 0.988 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
99. aida ENSDARG00000014532 1751 0.988 - - - - - - 0.988 - - axin interactor, dorsalization associated [Source:ZFIN;Acc:ZDB-GENE-071126-2]
100. trappc1 ENSDARG00000039005 6990 0.988 - - - 0.988 - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]

There are 697 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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