Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAP1B

Gene Name Gene ID Reads Annotation
RAP1B ENSGALG00000009927 26562 RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]











Genes with expression patterns similar to RAP1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAP1B ENSGALG00000009927 26562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
2. DHFR ENSGALG00000026757 18478 1.875 - - - - 0.880 - 0.995 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
3. RAB12 ENSGALG00000033608 14160 1.874 - - - - 0.882 - 0.992 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
4. DYNLRB1 ENSGALG00000034509 28361 1.597 - - - - 0.858 - - 0.739 - - dynein light chain roadblock-type 1
5. IFT20 ENSGALG00000005707 23973 0.994 - - - - - - 0.994 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
6. SLC9A3R1 ENSGALG00000007650 13053 0.993 - - - - - - 0.993 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
7. UBE2L3 ENSGALG00000036739 21401 0.993 - - - - - - 0.993 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
8. CNOT6 ENSGALG00000034316 10496 0.993 - - - - - - 0.993 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
9. LRPPRC ENSGALG00000009967 17091 0.992 - - - - - - 0.992 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
10. DAPK3 ENSGALG00000037733 6215 0.991 - - - - - - 0.991 - - - death-associated protein kinase 3, transcript variant X2
11. GPC1 ENSGALG00000040316 13364 0.991 - - - - - - 0.991 - - - glypican 1 [Source:NCBI gene;Acc:424770]
12. HDAC8 ENSGALG00000004825 12066 0.991 - - - - - - 0.991 - - - histone deacetylase 8, transcript variant X2
13. MCM3 ENSGALG00000016676 16934 0.99 - - - - - - 0.990 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
14. ARHGAP32 ENSGALG00000043511 7916 0.99 - - - - - - 0.990 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
15. DNAJC7 ENSGALG00000042796 14597 0.989 - - - - - - 0.989 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
16. FAT1 ENSGALG00000013579 6030 0.989 - - - - - - 0.989 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
17. MATR3 ENSGALG00000002478 12793 0.989 - - - - - - 0.989 - - - matrin 3 [Source:NCBI gene;Acc:373948]
18. CCNYL1 ENSGALG00000008485 11958 0.989 - - - - - - 0.989 - - - cyclin Y like 1
19. FAM192A ENSGALG00000021473 10213 0.988 - - - - - - 0.988 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
20. C9orf64 ENSGALG00000012589 6097 0.988 - - - - - - 0.988 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
21. SMARCE1 ENSGALG00000003882 49063 0.988 - - - - - - 0.988 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
22. WDHD1 ENSGALG00000012199 3570 0.988 - - - - - - 0.988 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
23. Sep-06 Sep-06 5961 0.987 - - - - - - 0.987 - - -
24. CORO1C ENSGALG00000004901 7055 0.987 - - - - - - 0.987 - - - coronin 1C [Source:NCBI gene;Acc:416893]
25. EIF1B ENSGALG00000038646 9508 0.987 - - - - - - 0.987 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
26. USPL1 ENSGALG00000017079 6263 0.987 - - - - - - 0.987 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
27. CXCL12 ENSGALG00000041346 4128 0.986 - - - - - - 0.986 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
28. CTBPL ENSGALG00000007642 14238 0.986 - - - - - - 0.986 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
29. TMEM18 ENSGALG00000028744 11779 0.986 - - - - - - 0.986 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
30. ZEB1 ENSGALG00000007260 9277 0.986 - - - - - - 0.986 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
31. CDCA4 ENSGALG00000011692 10381 0.984 - - - - - - 0.984 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
32. LRPAP1 ENSGALG00000015612 3526 0.984 - - - - - - 0.984 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
33. RNF141 ENSGALG00000029586 4962 0.983 - - - - - - 0.983 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
34. EFTUD2 ENSGALG00000000988 17913 0.983 - - - - - - 0.983 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
35. EIF3D ENSGALG00000012529 40887 0.983 - - - - - - 0.983 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
36. MCM6 ENSGALG00000012348 12523 0.983 - - - - - - 0.983 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
37. VSX1 ENSGALG00000037576 1517 0.983 - - - - - - 0.983 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
38. ZNF644 ENSGALG00000034253 28348 0.981 - - - - - - 0.981 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
39. C15H12ORF49 C15H12ORF49 13250 0.98 - - - - - - 0.980 - - -
40. HNRNPH3 ENSGALG00000003947 28724 0.979 - - - - - - 0.979 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
41. PPIG ENSGALG00000009839 24114 0.978 - - - - - - 0.978 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
42. INTS4 ENSGALG00000000091 5965 0.974 - - - - - - 0.974 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
43. HNRNPM ENSGALG00000000377 40684 0.973 - - - - - - 0.973 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
44. PDLIM4 ENSGALG00000039872 7823 0.97 - - - - - - 0.970 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
45. RPL24 ENSGALG00000015339 227460 0.935 - - - - 0.935 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
46. PTTG1 17936 0.908 - - - - 0.908 - - - - - pituitary tumor-transforming 1, transcript variant X1
47. LARP1 ENSGALG00000040109 14808 0.908 - - - - 0.908 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
48. PSMC2 ENSGALG00000008236 25980 0.905 - - - - 0.905 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
49. GBAS 18453 0.901 - - - - 0.901 - - - - - glioblastoma amplified sequence
50. ATP2A2 ENSGALG00000032287 12734 0.896 - - - - 0.896 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
51. RANGAP1 ENSGALG00000011966 20170 0.896 - - - - 0.896 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
52. PTPN12 9302 0.896 - - - - 0.896 - - - - - protein tyrosine phosphatase, non-receptor type 12
53. SKP2 ENSGALG00000003547 14637 0.896 - - - - 0.896 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
54. SDOS SDOS 66125 0.893 - - - - 0.893 - - - - -
55. OLA1 ENSGALG00000009325 26414 0.893 - - - - 0.893 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
56. FH ENSGALG00000013165 13669 0.891 - - - - 0.891 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
57. ENSGALG00000014852 ENSGALG00000014852 15288 0.89 - - - - 0.890 - - - - -
58. IGDCC4 ENSGALG00000007410 5457 0.89 - - - - 0.890 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
59. RCAN3 ENSGALG00000004282 7778 0.888 - - - - 0.888 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
60. MKI67 ENSGALG00000025996 28136 0.887 - - - - 0.887 - - - - - marker of proliferation Ki-67, transcript variant X3
61. SMC2 ENSGALG00000015691 34013 0.887 - - - - 0.887 - - - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
62. POLR3F ENSGALG00000008749 5645 0.886 - - - - 0.886 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
63. UBE2N ENSGALG00000030515 32059 0.885 - - - - 0.885 - - - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
64. GPN3 ENSGALG00000003807 6320 0.885 - - - - 0.885 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
65. PNRC2 ENSGALG00000004122 19228 0.883 - - - - 0.883 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
66. PLAA ENSGALG00000001782 5459 0.882 - - - - 0.882 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
67. AATF ENSGALG00000005420 6501 0.882 - - - - 0.882 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
68. PUM1 ENSGALG00000042598 9392 0.881 - - - - 0.881 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
69. NAA25 ENSGALG00000041821 12729 0.881 - - - - 0.881 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
70. MRPS25 ENSGALG00000008506 12131 0.881 - - - - 0.881 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
71. POLR2B ENSGALG00000011387 4864 0.881 - - - - 0.881 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
72. SH2D3C ENSGALG00000005036 5101 0.88 - - - - 0.880 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
73. MRPL23 ENSGALG00000006561 13737 0.88 - - - - 0.880 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
74. TLK2 ENSGALG00000000410 4690 0.879 - - - - 0.879 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
75. YY1 ENSGALG00000017388 1933 0.879 - - - - 0.879 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
76. IGBP1 ENSGALG00000044628 9200 0.879 - - - - 0.879 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
77. STRAP ENSGALG00000013092 13100 0.878 - - - - 0.878 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
78. EXO1 ENSGALG00000010748 7572 0.878 - - - - 0.878 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
79. REEP5 ENSGALG00000023157 6282 0.878 - - - - 0.878 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
80. COMMD8 ENSGALG00000026279 13509 0.878 - - - - 0.878 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
81. CDC42SE2 ENSGALG00000027258 4725 0.878 - - - - 0.878 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
82. CCT4 ENSGALG00000008812 78267 0.877 - - - - 0.877 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
83. SHROOM2 ENSGALG00000030802 4517 0.876 - - - - 0.876 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
84. ATG5 ENSGALG00000015387 7752 0.876 - - - - 0.876 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
85. KNOP1 ENSGALG00000002042 6251 0.876 - - - - 0.876 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
86. ENSGALG00000023447 ENSGALG00000023447 17486 0.875 - - - - 0.875 - - - - -
87. LATS2 4776 0.875 - - - - 0.875 - - - - - large tumor suppressor kinase 2
88. SIRT1 ENSGALG00000002761 9028 0.875 - - - - 0.875 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
89. KPNA3 ENSGALG00000017009 17330 0.875 - - - - 0.875 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
90. SFSWAP ENSGALG00000002487 9977 0.874 - - - - 0.874 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
91. ADD3 ENSGALG00000008542 13814 0.874 - - - - 0.874 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
92. NOP58 ENSGALG00000008454 34630 0.874 - - - - 0.874 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
93. PSPC1 ENSGALG00000017142 13036 0.874 - - - - 0.874 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
94. NAP1L1 ENSGALG00000010238 14506 0.873 - - - - 0.873 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
95. STK3 ENSGALG00000032850 6339 0.873 - - - - 0.873 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
96. COIL ENSGALG00000003158 7806 0.872 - - - - 0.872 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
97. RABEP1 ENSGALG00000001737 2650 0.872 - - - - 0.872 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
98. CBWD1 ENSGALG00000010147 2765 0.872 - - - - 0.872 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
99. FBXO9 ENSGALG00000016320 9600 0.87 - - - - 0.870 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
100. SRSF3 ENSGALG00000000533 51281 0.87 - - - - 0.870 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA