Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAP1A

Gene Name Gene ID Reads Annotation
RAP1A ENSGALG00000001476 5287 RAP1A, member of RAS oncogene family











Genes with expression patterns similar to RAP1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAP1A ENSGALG00000001476 5287 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAP1A, member of RAS oncogene family
2. NID2 ENSGALG00000012394 6717 1.726 - - - - - - 0.770 0.956 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
3. TCEA2 ENSGALG00000005976 9143 1.675 - - - - - - 0.807 0.868 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
4. LUC7L3 ENSGALG00000007386 11944 1.65 - - - - - - 0.787 0.863 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
5. PHF20L1 ENSGALG00000033205 7598 1.626 - - - - - - 0.760 0.866 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
6. LIMS1 ENSGALG00000029970 7244 1.61 - - - - - - 0.762 - 0.848 - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
7. POLDIP2 ENSGALG00000003211 11664 1.594 - - - - - - 0.731 0.863 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
8. AKR1B10L3 ENSGALG00000019284 5869 1.585 - - - - - - 0.719 0.866 - - aldo-keto reductase family 1 member B10-like 3
9. PLA2G7 ENSGALG00000016713 2100 1.572 - - - - - 0.720 - 0.852 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
10. UBE2R2 ENSGALG00000001668 9234 1.57 - - - - - - 0.835 - 0.735 - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
11. EXOSC1 ENSGALG00000039917 5259 1.569 - - - - 0.713 - - 0.856 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
12. HCFC2 ENSGALG00000029616 4525 1.531 - - - - - - 0.822 - 0.709 - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
13. TNRC6A ENSGALG00000006068 9166 1.53 - - - - - - 0.708 0.822 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
14. IARS ENSGALG00000004813 12936 1.502 - - - - - - 0.791 - 0.711 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
15. PDPK1 ENSGALG00000006418 13412 1.468 - - - - - - 0.721 0.747 - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
16. LOC415664 ENSGALG00000001791 2688 1.462 - - - - - 0.734 0.728 - - - uncharacterized oxidoreductase-like, transcript variant X1
17. TYW3 ENSGALG00000032549 4869 0.935 - - - - - - - 0.935 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
18. ASPM ENSGALG00000032398 12784 0.934 - - - - - - - 0.934 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
19. NPM3 ENSGALG00000032329 21138 0.934 - - - - - - - 0.934 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
20. MBNL2 ENSGALG00000016890 3162 0.925 - - - - - - - 0.925 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
21. CLINT1 ENSGALG00000003702 11269 0.919 - - - - - - - 0.919 - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
22. TRPC4 ENSGALG00000017044 300 0.916 - - - - - - - - 0.916 - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
23. MRPL28 ENSGALG00000007473 19134 0.914 - - - - - - - 0.914 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
24. ENSGALG00000020092 ENSGALG00000020092 3067 0.913 - - - - - - - 0.913 - -
25. ANO1 ENSGALG00000041808 5149 0.904 - - - - - - - - 0.904 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
26. NPEPL1 ENSGALG00000007533 5908 0.901 - - - - - - - 0.901 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
27. RABL5 RABL5 5264 0.898 - - - - - - - 0.898 - -
28. XKR6 ENSGALG00000016646 326 0.896 - - - - - - - - 0.896 - XK related 6 [Source:HGNC Symbol;Acc:HGNC:27806]
29. FGD5 ENSGALG00000008546 4031 0.888 - - - - - - - 0.888 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
30. RBM45 ENSGALG00000009202 6057 0.879 - - - - - - - - 0.879 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
31. THOC2 ENSGALG00000008507 9501 0.878 - - - - - - - 0.878 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
32. CTSA ENSGALG00000006876 5380 0.875 - - - - - - - 0.875 - - cathepsin A [Source:NCBI gene;Acc:428163]
33. METTL6 ENSGALG00000040665 4467 0.875 - - - - - - - 0.875 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
34. PAM16 9684 0.869 - - - - - - - 0.869 - - presequence translocase associated motor 16 homolog, transcript variant X2
35. C2CD2 ENSGALG00000016148 2734 0.868 - - - - - - - 0.868 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
36. TAF12 ENSGALG00000000991 8709 0.868 - - - - - - - 0.868 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
37. C5orf63 C5orf63 3718 0.867 - - - - - - - 0.867 - -
38. VPS26A ENSGALG00000004174 9198 0.867 - - - - - - - 0.867 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
39. TLN2 2295 0.867 - - - - - - - 0.867 - - talin 2, transcript variant X5
40. UBE2J2 ENSGALG00000001848 6527 0.865 - - - - - - - 0.865 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
41. TARS ENSGALG00000003288 12702 0.865 - - - - - - - 0.865 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
42. SRP9 ENSGALG00000026009 12418 0.865 - - - - - - - 0.865 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
43. CDC73 ENSGALG00000002469 4586 0.865 - - - - - - - 0.865 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
44. HVCN1 ENSGALG00000004562 2550 0.864 - - - - - - - 0.864 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
45. WDR82 ENSGALG00000025904 4783 0.864 - - - - - - - 0.864 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
46. HIPK3 ENSGALG00000011695 6842 0.864 - - - - - - - 0.864 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
47. FGF12 ENSGALG00000036971 2631 0.864 - - - - - - - - 0.864 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
48. DLGAP4 ENSGALG00000001046 6872 0.864 - - - - - - - 0.864 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
49. HMOX1 ENSGALG00000012550 1186 0.863 - - - - - - - 0.863 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
50. WDR45B ENSGALG00000001563 5870 0.863 - - - - - - - 0.863 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
51. AARSD1 ENSGALG00000002880 3068 0.863 - - - - - - - 0.863 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
52. MRPL10 ENSGALG00000014387 12386 0.863 - - - - - - - 0.863 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
53. CHST2 ENSGALG00000034507 6172 0.862 - - - - - - - 0.862 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
54. PTPRU ENSGALG00000031440 1357 0.862 - - - - - - - - 0.862 - protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
55. MT-ND4L MT-ND4L 12537 0.861 - - - - - - - - 0.861 -
56. UTP23 ENSGALG00000032400 3601 0.86 - - - - - - - 0.860 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
57. APPBP2 ENSGALG00000005314 6447 0.86 - - - - - - - 0.860 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
58. C1orf21 ENSGALG00000020922 4035 0.859 - - - - - - - 0.859 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
59. ARL4A ENSGALG00000027757 4285 0.858 - - - - - - - - 0.858 - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
60. EMC1 ENSGALG00000003969 6876 0.856 - - - - - - - 0.856 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
61. CABLES1 ENSGALG00000014998 1636 0.856 - - - - - - - 0.856 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
62. MYO3A ENSGALG00000007647 643 0.856 - - - - - - - - 0.856 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
63. SETD2 ENSGALG00000042051 2981 0.855 - - - - - - - 0.855 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
64. ITCH ENSGALG00000040474 2646 0.854 - - - - - - - 0.854 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
65. CPEB2 ENSGALG00000014516 1187 0.853 - - - - - - - 0.853 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
66. UBE2Q2 3861 0.852 - - - - - - - 0.852 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
67. FNTA ENSGALG00000015397 3741 0.852 - - - - - - - 0.852 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
68. CXorf23 1582 0.852 - - - - - - - 0.852 - - chromosome X open reading frame 23, transcript variant X3
69. SRPK2 ENSGALG00000008154 7385 0.852 - - - - - - - 0.852 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
70. TBCE ENSGALG00000013950 3076 0.851 - - - - - - - 0.851 - - tubulin folding cofactor E
71. POLR2C ENSGALG00000001168 10703 0.851 - - - - - - - 0.851 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
72. LIPA ENSGALG00000006378 4414 0.851 - - - - - - - 0.851 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
73. KIAA0922 4430 0.85 - - - - - 0.850 - - - - KIAA0922, transcript variant X4
74. ENSGALG00000005615 ENSGALG00000005615 4354 0.85 - - - - - - - 0.850 - -
75. RALBP1 ENSGALG00000008405 13780 0.85 - - - - - - - 0.850 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
76. CSPP1 1756 0.849 - - - - - - - - 0.849 - centrosome and spindle pole associated protein 1
77. CAPRIN2 1473 0.849 - - - - - - - 0.849 - - caprin family member 2, transcript variant X7
78. GNE ENSGALG00000015331 1577 0.849 - - - - - - - 0.849 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
79. GNB1L ENSGALG00000001925 1981 0.849 - - - - - - - 0.849 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
80. FTSJ2 FTSJ2 2951 0.849 - - - - - - - 0.849 - -
81. KPNA4 ENSGALG00000009549 3674 0.848 - - - - - - - 0.848 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
82. MAP4K5 ENSGALG00000012321 3036 0.848 - - - - - - - 0.848 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
83. RASGEF1B 2014 0.846 - - - - - - - 0.846 - - RasGEF domain family member 1B, transcript variant X8
84. VASH1 ENSGALG00000043036 1235 0.846 - - - - - - - 0.846 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
85. SEMA3F ENSGALG00000029621 2079 0.846 - - - - - - - 0.846 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
86. HMGXB3 ENSGALG00000005770 119 0.846 - - - - - - - - 0.846 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
87. NR3C2 ENSGALG00000010035 603 0.844 - - - - - - - 0.844 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
88. WNK2 ENSGALG00000038850 4712 0.844 - - - - - - - 0.844 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
89. ENSGALG00000001591 ENSGALG00000001591 784 0.842 - - - - - - - 0.842 - -
90. HIP1R ENSGALG00000031511 1981 0.841 - - - - - - - 0.841 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
91. FGD3 ENSGALG00000005237 4410 0.841 - - - - - - - 0.841 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
92. SLX4 ENSGALG00000031841 1208 0.841 - - - - - - - 0.841 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
93. C10orf11 C10orf11 3087 0.841 - - - - - - - 0.841 - -
94. FPGT ENSGALG00000026958 788 0.841 - - - - - - - 0.841 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
95. NCS1 ENSGALG00000012710 1104 0.84 - - - - - - - 0.840 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
96. SLC26A8 ENSGALG00000040498 253 0.84 - - - - - - - 0.840 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
97. MST1 ENSGALG00000002722 994 0.84 - - - - - - - - 0.840 - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
98. YTHDF3 ENSGALG00000039774 170 0.84 - - - - - - - 0.840 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
99. SENP6 ENSGALG00000015901 8013 0.839 - - - - - - 0.839 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
100. CAPN9 158 0.839 - - - - - - - 0.839 - - calpain 9

There are 544 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA