Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAF1

Gene Name Gene ID Reads Annotation
RAF1 ENSGALG00000004998 327 Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]











Genes with expression patterns similar to RAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAF1 ENSGALG00000004998 327 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
2. DRD4 ENSGALG00000040761 79 0.911 - - 0.911 - - - - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
3. RPAIN ENSGALG00000001666 2676 0.835 - - - - - - - - - 0.835 RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
4. TRPA1 ENSGALG00000034751 148 0.834 - - 0.834 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
5. NSUN6 ENSGALG00000008564 9 0.827 - - 0.827 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
6. GBP1 ENSGALG00000000720 55 0.817 - - 0.817 - - - - - - - guanylate binding protein 1
7. ENSGALG00000027352 ENSGALG00000027352 69 0.815 - - 0.815 - - - - - - -
8. ZAR1 ENSGALG00000035565 141 0.81 - - 0.810 - - - - - - - zygote arrest 1 [Source:HGNC Symbol;Acc:HGNC:20436]
9. ENSGALG00000026461 ENSGALG00000026461 61 0.801 - - 0.801 - - - - - - -
10. ISPD ENSGALG00000010795 7 0.8 - - - - - - - - - 0.800 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
11. UBE2A ENSGALG00000008648 174 0.799 - - - 0.799 - - - - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
12. CHST8 ENSGALG00000004903 16 0.797 - - - - - - - - - 0.797 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
13. NOX3 ENSGALG00000013659 4 0.797 - - - - - - - - - 0.797 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
14. NCX1 NCX1 9 0.797 - - - - - - - - - 0.797
15. ENSGALG00000012920 ENSGALG00000012920 8 0.797 - - - - - - - - - 0.797
16. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.797 - - - - - - - - - 0.797 secretin, transcript variant X6
17. ROS1 ENSGALG00000014913 7 0.797 - - - - - - - - - 0.797 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
18. IFNG ENSGALG00000009903 5 0.797 - - - - - - - - - 0.797 interferon gamma [Source:NCBI gene;Acc:396054]
19. C2 ENSGALG00000035721 5 0.797 - - - - - - - - - 0.797 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
20. MUC4 4 0.797 - - - - - - - - - 0.797 mucin 4, cell surface associated, transcript variant X5
21. GPR12 ENSGALG00000017102 4 0.797 - - - - - - - - - 0.797 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
22. MLF1 ENSGALG00000009654 619 0.796 - - 0.796 - - - - - - - myeloid leukemia factor 1, transcript variant X3
23. STOML3 ENSGALG00000017039 6 0.795 - - - - - - - - - 0.795 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
24. CSF3 ENSGALG00000030907 11 0.795 - - - - - - - - - 0.795 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
25. TNIP1 ENSGALG00000004496 355 0.792 - - 0.792 - - - - - - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
26. EPHA10 ENSGALG00000001912 5 0.792 - - 0.792 - - - - - - - EPH receptor A10, transcript variant X1
27. SLC6A18 ENSGALG00000013180 6 0.792 - - 0.792 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
28. ENSGALG00000020389 ENSGALG00000020389 5 0.792 - - 0.792 - - - - - - -
29. CCR5 ENSGALG00000037077 23 0.791 - - - - - - - - - 0.791 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
30. AGBL2 ENSGALG00000029618 8 0.79 - - 0.790 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
31. CFH ENSGALG00000002431 31 0.789 - - - - - - - - - 0.789 complement factor H, transcript variant X1
32. AKAP6 ENSGALG00000009995 77 0.789 - - 0.789 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
33. CUBN ENSGALG00000008704 21 0.789 - - - 0.789 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
34. PCBP2 ENSGALG00000013155, ENSGALG00000041030 15 0.788 - - 0.788 - - - - - - - poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
35. gga-mir-7452 ENSGALG00000035329 912 0.788 - - - - - - - - - 0.788 gga-mir-7452 [Source:miRBase;Acc:MI0024122]
36. C8B ENSGALG00000010853 21 0.787 - - - 0.787 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
37. MMR1L3 ENSGALG00000008638 26 0.787 - - - 0.787 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
38. BFIV21 BFIV21 30 0.787 - - - 0.787 - - - - - -
39. AIM1 51 0.787 - - - 0.787 - - - - - - absent in melanoma 1, transcript variant X2
40. gga-mir-1600 ENSGALG00000025438 248 0.787 - - - - - - - - - 0.787 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
41. STK17B ENSGALG00000007924 519 0.787 - - - 0.787 - - - - - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
42. KLHL23 ENSGALG00000020737 13 0.787 - - 0.787 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
43. NFXL1 ENSGALG00000014138 36 0.786 - - 0.786 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
44. ATXN3 ENSGALG00000010766 48 0.785 - - - 0.785 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
45. ENSGALG00000010336 ENSGALG00000010336 16 0.784 - - - 0.784 - - - - - -
46. DENND1B ENSGALG00000002246 6 0.783 - - - - - - - - - 0.783 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
47. SCARB1 ENSGALG00000046226 428 0.782 - - - 0.782 - - - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
48. CFAP74 ENSGALG00000001288 54 0.782 - - - 0.782 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
49. LHX9 ENSGALG00000002223 12 0.78 - - - - - - - - - 0.780 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
50. ADAMTS15 ENSGALG00000001407 11 0.78 - - 0.780 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
51. SUB1L1 ENSGALG00000027147 73 0.78 - - - - - - - - - 0.780 SUB1 homolog (S. cerevisiae)-like 1
52. GTPBP8 ENSGALG00000015190 21 0.778 - - 0.778 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
53. PROC ENSGALG00000001780 26 0.778 - - - 0.778 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
54. RYR2 ENSGALG00000010812 95 0.778 - - - 0.778 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
55. ZNF770 ENSGALG00000009817 27 0.778 - - - - - - - - - 0.778 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
56. MFSD2B ENSGALG00000016498 208 0.777 - - 0.777 - - - - - - - major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
57. SMU1 ENSGALG00000002014 8136 0.777 - - - - - - - - - 0.777 SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
58. SERPINE3 ENSGALG00000017017 32 0.776 - - - - - - - - - 0.776 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
59. BLVRA ENSGALG00000031786 23 0.776 - - 0.776 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
60. NTN4 ENSGALG00000011406 72 0.776 - - - 0.776 - - - - - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
61. GPCPD1 ENSGALG00000009130 24 0.775 - - 0.775 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
62. GRIN2A ENSGALG00000007278 17 0.774 - - - 0.774 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
63. AQP1 ENSGALG00000005209 111 0.774 - - - - - - - - - 0.774 aquaporin 1 [Source:NCBI gene;Acc:420384]
64. KIF1B ENSGALG00000002726 461 0.773 - - - 0.773 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
65. ENSGALG00000017269 ENSGALG00000017269 13 0.773 - - 0.773 - - - - - - -
66. C7H2ORF69 ENSGALG00000008136 89 0.772 - - 0.772 - - - - - - - chromosome 7 open reading frame, human C2orf69 [Source:NCBI gene;Acc:424064]
67. DNAJC13 ENSGALG00000035068 180 0.772 - - - 0.772 - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
68. EPB41L4A ENSGALG00000000234 113 0.772 - - - 0.772 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
69. ENSGALG00000019568 ENSGALG00000019568 25 0.771 - - 0.771 - - - - - - -
70. ZC3H7B ENSGALG00000011965 6 0.771 - - - - - - - - - 0.771 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
71. RPLP1 ENSGALG00000030878 445592 0.77 - - - 0.770 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
72. HERPUD1 ENSGALG00000001220 18 0.769 - - 0.769 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
73. ENSGALG00000028038 ENSGALG00000028038 9 0.769 - - 0.769 - - - - - - -
74. PNPLA2 ENSGALG00000014569 7 0.769 - - 0.769 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
75. ADAMTS5 ENSGALG00000015795 6 0.767 - - - - - - - - - 0.767 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
76. TTC9 ENSGALG00000017652 16 0.767 - - - - - - - - - 0.767 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
77. LOC100858777 ENSGALG00000027624 58 0.766 - - - - - - - - - 0.766 rhodopsin, GQ-coupled-like
78. STAG3 STAG3 34 0.766 - - 0.766 - - - - - - -
79. ID3 ENSGALG00000035317 52 0.766 - - 0.766 - - - - - - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
80. RNF168 ENSGALG00000006392 507 0.765 - - - - - - - - - 0.765 ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
81. CPNE7 ENSGALG00000000507 54 0.765 - - - - - - - - - 0.765 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
82. PRDM4 ENSGALG00000012619 876 0.765 - - 0.765 - - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
83. PDE1C ENSGALG00000039935 16 0.763 - - 0.763 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
84. SPINK4 ENSGALG00000043964 50 0.763 - - - - - - - - - 0.763 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
85. FBXO16 7 0.763 - - 0.763 - - - - - - - F-box protein 16, transcript variant X1
86. SLITRK2 ENSGALG00000009192 51 0.763 - - 0.763 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
87. NEDD4 ENSGALG00000004347 236 0.763 - - - - - - - - - 0.763 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:7727]
88. ZDHHC15 ENSGALG00000007800 24 0.762 - - 0.762 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
89. MTMR3 ENSGALG00000008051 9 0.761 - - 0.761 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
90. TMC7 ENSGALG00000006889 125 0.761 - - - 0.761 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
91. ERCC8 ENSGALG00000014732 1181 0.76 - - - 0.760 - - - - - - ERCC excision repair 8, CSA ubiquitin ligase complex subunit [Source:HGNC Symbol;Acc:HGNC:3439]
92. MECR ENSGALG00000032763 110 0.76 - - 0.760 - - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
93. ENSGALG00000026058 ENSGALG00000026058 144 0.76 - - - 0.760 - - - - - -
94. KAL1 KAL1 48 0.76 - - 0.760 - - - - - - -
95. ELF2 ENSGALG00000009774 83 0.759 - - 0.759 - - - - - - - E74 like ETS transcription factor 2, transcript variant X5
96. KIAA0319L ENSGALG00000002445 75 0.758 - - - 0.758 - - - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
97. DNAH7 ENSGALG00000007841 32 0.758 - - - - - - - - - 0.758 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
98. ISCA2 ENSGALG00000020417 1130 0.756 - - - 0.756 - - - - - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
99. CTNNA3 ENSGALG00000002845 127 0.756 - - - - - - - - - 0.756 catenin alpha 3 [Source:NCBI gene;Acc:423648]
100. TUBD1 ENSGALG00000005173 1364 0.754 - - 0.754 - - - - - - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA