Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAE1

Gene Name Gene ID Reads Annotation
RAE1 ENSGALG00000007653 8930 ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]











Genes with expression patterns similar to RAE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAE1 ENSGALG00000007653 8930 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
2. ESRP2 ENSGALG00000003374 4436 1.775 - - 0.790 - 0.985 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
3. KCTD10 ENSGALG00000005138 1191 1.765 - - 0.800 - - - - 0.965 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
4. PSMD14 ENSGALG00000011128 13335 1.751 - - 0.772 - 0.979 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
5. TRIM33 ENSGALG00000001976 7404 1.732 - - - - 0.991 - 0.741 - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
6. RAB21 ENSGALG00000010183 7718 1.708 - - - - 0.987 - 0.721 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
7. AHCY ENSGALG00000033677 35555 1.708 - - - - 0.888 - - 0.820 - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
8. CDC5L ENSGALG00000016704 22893 1.707 - - 0.734 - 0.973 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
9. WHSC1L1 4065 1.701 - - - - 0.995 - 0.706 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
10. PGAM5 ENSGALG00000002137 7700 1.698 - - - - 0.987 - 0.711 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
11. URB1 ENSGALG00000015887 5854 1.694 - - 0.724 - - - - 0.970 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
12. CPSF6 ENSGALG00000019355 7634 1.638 - - - - - - 0.717 0.921 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
13. MTHFD1 ENSGALG00000011797 11001 1.589 - - - - - - 0.715 0.874 - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
14. AZIN1 ENSGALG00000029295 11085 1.585 - - - - 0.875 - 0.710 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
15. KPNA3 ENSGALG00000017009 17330 1.578 - - - - - - 0.715 0.863 - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
16. MCTS1 ENSGALG00000008517 27514 1.573 - - - - - - 0.716 0.857 - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
17. ZNF639 ENSGALG00000005944 6387 1.563 - - 0.728 - 0.835 - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
18. REXO2 ENSGALG00000035980 16319 1.526 - - 0.788 - - - 0.738 - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
19. TRAPPC2L ENSGALG00000006250 21772 1.521 - - - - 0.742 - 0.779 - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
20. NDUFC2 ENSGALG00000029172 26136 1.505 - - 0.769 - - - 0.736 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
21. WBP4 ENSGALG00000016949 5858 1.492 - - 0.716 - 0.776 - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
22. TNFAIP1 ENSGALG00000005715 3347 1.438 - - 0.701 - - - 0.737 - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
23. KIF11 ENSGALG00000030597 5528 1.434 - - 0.725 - - - 0.709 - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
24. SPTLC1 ENSGALG00000013493 3918 1.43 - - 0.729 - - - 0.701 - - - serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]
25. ENSGALG00000021397 ENSGALG00000021397 51155 1.423 - - - - 0.714 - - 0.709 - -
26. MYEOV2 MYEOV2 5155 0.997 - - - - 0.997 - - - - -
27. HTRA3 ENSGALG00000034673 512 0.997 - - - - 0.997 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
28. RNF113A ENSGALG00000000538 3985 0.997 - - - - 0.997 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
29. PPAPDC1B PPAPDC1B 6698 0.997 - - - - 0.997 - - - - -
30. NDST2 ENSGALG00000005107 4224 0.997 - - - - 0.997 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
31. gga-mir-6584 ENSGALG00000028834 1481 0.997 - - - - 0.997 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
32. SEC61A2 ENSGALG00000036300 4235 0.996 - - - - 0.996 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
33. MRPL46 ENSGALG00000006782 5033 0.996 - - - - 0.996 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
34. C15H12ORF49 C15H12ORF49 13250 0.996 - - - - 0.996 - - - - -
35. MRPL22 ENSGALG00000003919 2760 0.996 - - - - 0.996 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
36. PHKA1 ENSGALG00000004801 2510 0.995 - - - - 0.995 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
37. TBC1D7 ENSGALG00000012731 4891 0.995 - - - - 0.995 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
38. ABCC1 ENSGALG00000006646 2596 0.995 - - - - 0.995 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
39. MED1 ENSGALG00000001708 9556 0.995 - - - - 0.995 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
40. MAP1B ENSGALG00000014999 6288 0.995 - - - - 0.995 - - - - - microtubule associated protein 1B
41. EPB41L1 ENSGALG00000034171 3616 0.995 - - - - 0.995 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
42. HYOU1 ENSGALG00000007659 3555 0.995 - - - - 0.995 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
43. IBA57 ENSGALG00000005328 4362 0.995 - - - - 0.995 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
44. CCDC59 ENSGALG00000028648 9272 0.995 - - - - 0.995 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
45. TNPO3 ENSGALG00000039420 5178 0.995 - - - - 0.995 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
46. TMEM39B ENSGALG00000003287 4125 0.995 - - - - 0.995 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
47. VPS8 ENSGALG00000006704 5419 0.994 - - - - 0.994 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
48. BCL9 ENSGALG00000037655 4620 0.994 - - - - 0.994 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
49. USP1 ENSGALG00000010957 8297 0.994 - - - - 0.994 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
50. NOL6 ENSGALG00000030730 7191 0.994 - - - - 0.994 - - - - - nucleolar protein 6
51. AGPAT3 ENSGALG00000031932 6903 0.993 - - - - 0.993 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
52. ENSGALG00000004132 ENSGALG00000004132 9287 0.992 - - - - - - - 0.992 - -
53. RILPL2 ENSGALG00000003321 5632 0.992 - - - - 0.992 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
54. UQCRC2 ENSGALG00000002490 23477 0.992 - - - - 0.992 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
55. KCTD9 ENSGALG00000000275 3455 0.992 - - - - 0.992 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
56. TMEM18 ENSGALG00000028744 11779 0.992 - - - - 0.992 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
57. SPG21 ENSGALG00000007262 8050 0.992 - - - - 0.992 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
58. OPTC ENSGALG00000003554 3698 0.992 - - - - 0.992 - - - - - opticin [Source:NCBI gene;Acc:395130]
59. MRPS11 ENSGALG00000006777 16009 0.991 - - - - 0.991 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
60. HMGB3 ENSGALG00000009071 12011 0.991 - - - - 0.991 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
61. AATF ENSGALG00000005420 6501 0.991 - - - - - - - 0.991 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
62. LUC7L2 ENSGALG00000036238 11817 0.99 - - - - 0.990 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
63. DNAJC2 ENSGALG00000008249 28064 0.99 - - - - 0.990 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
64. TBRG4 ENSGALG00000038102 9269 0.99 - - - - 0.990 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
65. THBS1 ENSGALG00000009626 3521 0.99 - - - - 0.990 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
66. NSG1 ENSGALG00000015010 5829 0.99 - - - - 0.990 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
67. TM2D2 ENSGALG00000003356 7088 0.99 - - - - 0.990 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
68. M6PR ENSGALG00000031681 9442 0.989 - - - - 0.989 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
69. C4orf27 C4orf27 16724 0.988 - - - - 0.988 - - - - -
70. CENPE ENSGALG00000013208 12337 0.987 - - - - 0.987 - - - - - centromere protein E, transcript variant X4
71. HOXB3 ENSGALG00000043219 5198 0.986 - - - - 0.986 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
72. ETF1 ENSGALG00000002262 14560 0.985 - - - - 0.985 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
73. SEC63 ENSGALG00000015308 11596 0.985 - - - - 0.985 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
74. UBE2G2 ENSGALG00000005667 12689 0.985 - - - - 0.985 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
75. SAMM50 ENSGALG00000014194 20437 0.984 - - - - 0.984 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
76. STRN ENSGALG00000010580 7561 0.984 - - - - - - - 0.984 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
77. FAM98A ENSGALG00000010428 9585 0.983 - - - - 0.983 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
78. MORN4 ENSGALG00000006149 7772 0.983 - - - - 0.983 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
79. OAF ENSGALG00000006715 12518 0.983 - - - - 0.983 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
80. RALB ENSGALG00000026493 14590 0.981 - - - - 0.981 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
81. MCM4 ENSGALG00000012915 13151 0.981 - - - - 0.981 - - - - - minichromosome maintenance complex component 4
82. NUP37 ENSGALG00000012759 9985 0.981 - - - - 0.981 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
83. TCF7L2 ENSGALG00000008883 13688 0.98 - - - - 0.980 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
84. INCENP ENSGALG00000007537 16617 0.98 - - - - 0.980 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
85. RBM26 ENSGALG00000016910 13769 0.98 - - - - 0.980 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
86. CWC22 ENSGALG00000009001 5984 0.976 - - - - 0.976 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
87. CREPT CREPT 17142 0.974 - - - - 0.974 - - - - -
88. ZEB1 ENSGALG00000007260 9277 0.973 - - - - 0.973 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
89. BRP44L BRP44L 30452 0.972 - - - - 0.972 - - - - -
90. LZTFL1 ENSGALG00000033928 3493 0.97 - - - - - - - 0.970 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
91. COX20 ENSGALG00000027440 5881 0.969 - - - - - - - 0.969 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
92. TLK2 ENSGALG00000000410 4690 0.969 - - - - - - - 0.969 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
93. PRKRIP1 ENSGALG00000001833 5092 0.969 - - - - - - - 0.969 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
94. TCTN3 ENSGALG00000010517 3985 0.968 - - - - - - - 0.968 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
95. SLC25A15 ENSGALG00000017032 6773 0.968 - - - - - - - 0.968 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
96. SPTAN1 ENSGALG00000004719 20251 0.968 - - - - - - - 0.968 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
97. VIMENTIN VIMENTIN 33105 0.968 - - - - - - - 0.968 - -
98. CDCA9 ENSGALG00000021225 2244 0.968 - - - - - - - 0.968 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
99. ITGA1 ENSGALG00000014891 11378 0.967 - - - - - - - 0.967 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
100. VATB VATB 13756 0.967 - - - - - - - 0.967 - -

There are 474 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA