Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAD54B

Gene Name Gene ID Reads Annotation
RAD54B ENSGALG00000043597 1699 RAD54 homolog B [Source:NCBI gene;Acc:395449]











Genes with expression patterns similar to RAD54B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAD54B ENSGALG00000043597 1699 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RAD54 homolog B [Source:NCBI gene;Acc:395449]
2. SLMO2 SLMO2 9207 1.81 - - - - 0.968 - - 0.842 - -
3. C19H17ORF85 C19H17ORF85 2538 1.527 - - - - - 0.751 - 0.776 - -
4. ELOVL5 ENSGALG00000016314 18163 1.525 - - - - 0.819 0.706 - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
5. C1orf168 C1orf168 98 1.496 - - 0.706 - - 0.790 - - - -
6. ATG16L1 ENSGALG00000001619 3562 1.49 - - - - 0.745 - - 0.745 - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
7. GPR161 ENSGALG00000015247 3473 1.482 - - - - - - 0.736 0.746 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
8. ALG8 ENSGALG00000019042 3636 1.478 - - - - - - 0.741 0.737 - - ALG8, alpha-1,3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:23161]
9. ATF3 ENSGALG00000025887 814 1.462 - - - - - - 0.718 0.744 - - activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]
10. PRKACB ENSGALG00000028530 12506 1.46 - - - - - 0.713 - 0.747 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
11. DDX59 ENSGALG00000002164 3314 1.459 - - - - - 0.739 - 0.720 - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
12. SEC22A ENSGALG00000011697 7981 1.456 - - - - - - 0.756 0.700 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
13. TJP2 ENSGALG00000015109 4002 1.449 - - - - - - 0.708 0.741 - - tight junction protein 2 [Source:NCBI gene;Acc:395751]
14. METTL5 ENSGALG00000009676 3252 1.415 - - - - - - 0.705 0.710 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
15. PTK2B ENSGALG00000016564 406 0.994 - - - - 0.994 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
16. ASAP2 ENSGALG00000016419 1393 0.994 - - - - 0.994 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
17. NDUFV1 ENSGALG00000042809 6222 0.994 - - - - 0.994 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
18. SMG7 ENSGALG00000004667 707 0.994 - - - - 0.994 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
19. PITHD1 ENSGALG00000003986 11470 0.993 - - - - 0.993 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
20. PREP2 PREP2 238 0.993 - - - - 0.993 - - - - -
21. ANKRD9 ENSGALG00000011376 525 0.993 - - - - 0.993 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
22. BRF1 ENSGALG00000011705 3406 0.993 - - - - 0.993 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
23. RAMP3 ENSGALG00000037246 1187 0.993 - - - - 0.993 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
24. RBM6 ENSGALG00000035578 1690 0.993 - - - - 0.993 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
25. SDCBP ENSGALG00000015436 1228 0.993 - - - - 0.993 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
26. GTF2H1 ENSGALG00000042340 1553 0.992 - - - - 0.992 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
27. PRDM4 ENSGALG00000012619 876 0.992 - - - - 0.992 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
28. MED8 ENSGALG00000009993 3095 0.992 - - - - 0.992 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
29. BAHD1 ENSGALG00000033675 1779 0.991 - - - - 0.991 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
30. MRPL16 ENSGALG00000029419 8033 0.991 - - - - 0.991 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
31. RBM34 ENSGALG00000029915 5618 0.991 - - - - 0.991 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
32. LZIC ENSGALG00000002616 9052 0.991 - - - - 0.991 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
33. SAP30 ENSGALG00000036252 2032 0.991 - - - - 0.991 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
34. SYNE1 ENSGALG00000013505 2324 0.99 - - - - 0.990 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
35. ETS1 ENSGALG00000001143 7284 0.99 - - - - 0.990 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
36. HSF2 ENSGALG00000038420 5259 0.99 - - - - 0.990 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
37. YARS ENSGALG00000003563 11093 0.99 - - - - 0.990 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
38. SNX14 ENSGALG00000015831 2554 0.989 - - - - 0.989 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
39. PHTF1 ENSGALG00000001845 3276 0.989 - - - - 0.989 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
40. TMF1 ENSGALG00000013408 3344 0.989 - - - - 0.989 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
41. FNDC5 ENSGALG00000003567 3328 0.987 - - - - 0.987 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
42. ENSGALG00000006569 ENSGALG00000006569 2169 0.987 - - - - 0.987 - - - - -
43. DGKZ ENSGALG00000008380 5389 0.987 - - - - 0.987 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
44. KIF11 ENSGALG00000030597 5528 0.987 - - - - 0.987 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
45. TSPO2 ENSGALG00000003212 5141 0.987 - - - - 0.987 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
46. IARS2 ENSGALG00000009566 4599 0.986 - - - - 0.986 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
47. EDNRA ENSGALG00000010013 2472 0.986 - - - - 0.986 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
48. PBRM1 ENSGALG00000037455 6450 0.986 - - - - 0.986 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
49. MED21 ENSGALG00000027435 5766 0.985 - - - - 0.985 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
50. COQ5 ENSGALG00000007185 5614 0.985 - - - - 0.985 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
51. LOC426385 ENSGALG00000026301 2703 0.985 - - - - 0.985 - - - - - serine/threonine kinase 35-like, transcript variant X2
52. STARD3NL ENSGALG00000033038 4851 0.985 - - - - 0.985 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
53. TIMMDC1 ENSGALG00000024480 9337 0.984 - - - - 0.984 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
54. RALGDS ENSGALG00000003412 4478 0.984 - - - - 0.984 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
55. CDKN1B ENSGALG00000022980 4606 0.984 - - - - 0.984 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
56. C9orf85 ENSGALG00000026001 4110 0.984 - - - - 0.984 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
57. LMAN2 ENSGALG00000033232 11740 0.984 - - - - 0.984 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
58. WDR92 ENSGALG00000008760 3934 0.983 - - - - 0.983 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
59. ENSGALG00000027854 ENSGALG00000027854 5007 0.983 - - - - 0.983 - - - - -
60. MEF2BNB MEF2BNB 5578 0.982 - - - - 0.982 - - - - -
61. DLL1 ENSGALG00000011182 1613 0.981 - - - - 0.981 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
62. LGMN ENSGALG00000010811 7401 0.979 - - - - 0.979 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
63. CDH3 5050 0.979 - - - - 0.979 - - - - - cadherin 3
64. MARC1 ENSGALG00000009453 5675 0.979 - - - - 0.979 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
65. UTP6 ENSGALG00000003260 4909 0.979 - - - - 0.979 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
66. PSMG3 ENSGALG00000004203 11240 0.979 - - - - 0.979 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
67. FUNDC2 ENSGALG00000029585 9334 0.978 - - - - 0.978 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
68. SFXN5 ENSGALG00000016094 2678 0.978 - - - - 0.978 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
69. UPF3B ENSGALG00000008618 12350 0.977 - - - - 0.977 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
70. WNK2 ENSGALG00000038850 4712 0.977 - - - - 0.977 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
71. CDCA7 ENSGALG00000040833 7484 0.976 - - - - 0.976 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
72. CCDC132 CCDC132 2632 0.976 - - - - 0.976 - - - - -
73. RHOT1 ENSGALG00000003397 5149 0.974 - - - - 0.974 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
74. ACAT2 ENSGALG00000011659 12825 0.972 - - - - 0.972 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
75. HARS ENSGALG00000035080 11602 0.972 - - - - 0.972 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
76. PSMD3 ENSGALG00000033162 25615 0.971 - - - - 0.971 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
77. SH3BGR ENSGALG00000016127 2561 0.97 - - - - 0.970 - - - - - SH3 domain binding glutamate rich protein
78. MYBL2 ENSGALG00000003503 15875 0.969 - - - - 0.969 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
79. MYO9A ENSGALG00000033618 4505 0.967 - - - - 0.967 - - - - - myosin IXA, transcript variant X10
80. SPRED1 ENSGALG00000028203 6520 0.967 - - - - 0.967 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
81. DLD ENSGALG00000007931 11011 0.967 - - - - 0.967 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
82. SLC30A4 ENSGALG00000005703 5696 0.966 - - - - 0.966 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
83. TAF3 ENSGALG00000006731 15569 0.965 - - - - 0.965 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
84. ZC3H6 ENSGALG00000008269 10353 0.964 - - - - 0.964 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
85. DENR ENSGALG00000003795 30805 0.964 - - - - 0.964 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
86. GATC ENSGALG00000007195 8610 0.963 - - - - 0.963 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
87. NEK6 ENSGALG00000001118 20333 0.963 - - - - 0.963 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
88. SPEN ENSGALG00000036932 9688 0.963 - - - - 0.963 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
89. LGALS1 ENSGALG00000012420 13993 0.962 - - - - 0.962 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
90. NUP88 ENSGALG00000032280 9847 0.962 - - - - 0.962 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
91. SRGAP1 ENSGALG00000009825 6753 0.96 - - - - 0.960 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
92. TM9SF3 ENSGALG00000005534 15290 0.959 - - - - 0.959 - - - - - transmembrane 9 superfamily member 3
93. PRCC ENSGALG00000040696 9346 0.958 - - - - 0.958 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
94. HDAC8 ENSGALG00000004825 12066 0.953 - - - - 0.953 - - - - - histone deacetylase 8, transcript variant X2
95. SRP19 ENSGALG00000000218 14207 0.953 - - - - 0.953 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
96. Mar-05 Mar-05 6330 0.953 - - - - 0.953 - - - - -
97. ZYX ENSGALG00000014688 8686 0.951 - - - - 0.951 - - - - - zyxin [Source:NCBI gene;Acc:418300]
98. PRKCI ENSGALG00000009364 11574 0.95 - - - - 0.950 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
99. CENPP ENSGALG00000004687 6707 0.947 - - - - 0.947 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
100. VMA21 ENSGALG00000009065 6432 0.944 - - - - 0.944 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]

There are 477 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA