Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAD50

Gene Name Gene ID Reads Annotation
RAD50 ENSGALG00000006794 4308 RAD50 double strand break repair protein, transcript variant X4











Genes with expression patterns similar to RAD50

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAD50 ENSGALG00000006794 4308 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 RAD50 double strand break repair protein, transcript variant X4
2. THAP5 ENSGALG00000009494 6540 2.401 - - 0.702 - - - 0.746 0.953 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
3. TMED7 ENSGALG00000028484 21008 2.391 - - - - - - 0.721 0.772 - 0.898 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
4. RBBP8 ENSGALG00000014982 3255 2.29 - - 0.749 - - - 0.730 - - 0.811 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
5. LGALS1 ENSGALG00000012420 13993 2.226 - - 0.722 - - - 0.714 - - 0.790 galectin 1 [Source:NCBI gene;Acc:396491]
6. TMEM237 ENSGALG00000008381 1317 1.87 - - - - - - - 0.943 - 0.927 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
7. SMAD1 ENSGALG00000009977 3540 1.823 - - 0.876 - - - - 0.947 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
8. PCNP ENSGALG00000015330 15750 1.801 - - - - - - - 0.876 - 0.925 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
9. HYAL3 ENSGALG00000029000 712 1.776 - - 0.822 - - - - - - 0.954 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
10. WHSC1 1712 1.772 - - 0.803 - - - - - - 0.969 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
11. AGGF1 ENSGALG00000004311 3011 1.768 - - 0.798 - - - - - - 0.970 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
12. PRPF38B ENSGALG00000001972 2009 1.726 - - 0.846 - - - - - - 0.880 pre-mRNA processing factor 38B
13. MLX ENSGALG00000003199 5286 1.725 - - - - - - - 0.955 - 0.770 MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
14. QSER1 ENSGALG00000012030 4490 1.722 - - 0.879 - - - - - - 0.843 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
15. GID8 ENSGALG00000005700 3992 1.709 - - - - - - - 0.944 - 0.765 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
16. NAA30 ENSGALG00000012098 4681 1.705 - - 0.823 - - - - - - 0.882 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
17. DHX38 ENSGALG00000000787 6913 1.698 - - - - - - - 0.911 - 0.787 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
18. DHRS7 ENSGALG00000011921 4470 1.697 - - - - - - - 0.883 - 0.814 dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
19. ATP6V0C ENSGALG00000009229 125870 1.684 - - 0.753 - - - - - - 0.931 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
20. UBN1 ENSGALG00000031416 2848 1.682 - - 0.846 - - - - - - 0.836 ubinuclein 1 [Source:NCBI gene;Acc:416398]
21. UBE2V1 ENSGALG00000008015 17947 1.68 - - - - - - 0.760 0.920 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
22. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.679 - - 0.720 - - - - 0.959 - -
23. CKAP2 ENSGALG00000017025 25020 1.676 - - 0.753 - - - - - - 0.923 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
24. HDAC2 ENSGALG00000014991 23458 1.676 - - 0.735 - - - - - - 0.941 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
25. FZD6 ENSGALG00000030626 3336 1.675 - - 0.782 - - - - - - 0.893 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
26. ARID1B ENSGALG00000013683 3397 1.675 - - - - - - - 0.948 - 0.727 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
27. WFDC1 ENSGALG00000005503 6152 1.675 - - - - - - 0.712 - - 0.963 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
28. MRPS31 ENSGALG00000017033 9287 1.674 - - - - - - 0.745 - - 0.929 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
29. GXYLT1 ENSGALG00000009532 5682 1.67 - - - - - - 0.739 - - 0.931 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
30. ATRIP ENSGALG00000004670 3647 1.669 - - 0.721 - - - - 0.948 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
31. SPDL1 ENSGALG00000001942 4403 1.669 - - - - - - 0.722 - - 0.947 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
32. PAXIP1 ENSGALG00000036064 3120 1.666 - - - - - - 0.707 0.959 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
33. TWSG1 ENSGALG00000008400 1869 1.665 - - 0.782 - - - - - - 0.883 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
34. KLHL13 KLHL13 2712 1.663 - - - - - - 0.707 0.956 - -
35. SLK ENSGALG00000008318 2220 1.661 - - 0.797 - - - - - - 0.864 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
36. CAMSAP1 ENSGALG00000001692 2617 1.661 - - 0.811 - - - - - - 0.850 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
37. CNTRL ENSGALG00000001513 1773 1.66 - - 0.702 - - - - - - 0.958 centriolin [Source:NCBI gene;Acc:417121]
38. TMLHE ENSGALG00000007443 3619 1.656 - - 0.704 - - - - - - 0.952 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
39. UCHL3 ENSGALG00000016921 16208 1.655 - - - - - - 0.729 - - 0.926 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
40. CCNA2 ENSGALG00000011881 2574 1.651 - - 0.747 - - - - - - 0.904 cyclin A2 [Source:NCBI gene;Acc:396172]
41. DNTTIP1 ENSGALG00000003575 4687 1.644 - - 0.714 - - - - 0.930 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
42. SMC4 ENSGALG00000009553 15715 1.643 - - 0.706 - - - - - - 0.937 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
43. FANCL ENSGALG00000030022 7423 1.638 - - - - - - 0.745 - - 0.893 FA complementation group L [Source:NCBI gene;Acc:421202]
44. NUP153 ENSGALG00000012720 8079 1.623 - - - - - - - 0.918 - 0.705 nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
45. SLC39A6 ENSGALG00000013209 1754 1.623 - - 0.763 - - - - - - 0.860 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
46. PLRG1 ENSGALG00000009257 8613 1.623 - - - - - - 0.720 0.903 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
47. SP3 ENSGALG00000031796 8997 1.619 - - 0.803 - - - - - - 0.816 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
48. WBP4 ENSGALG00000016949 5858 1.609 - - 0.793 - - - - - - 0.816 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
49. CZH9ORF80 CZH9ORF80 12760 1.606 - - - - - - 0.703 0.903 - -
50. BIRC6 ENSGALG00000010541 7999 1.605 - - - - - - 0.804 0.801 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
51. LOC426385 ENSGALG00000026301 2703 1.599 - - - - - - 0.700 - - 0.899 serine/threonine kinase 35-like, transcript variant X2
52. DCUN1D1 ENSGALG00000008807 6545 1.589 - - 0.850 - - - 0.739 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
53. GTF2E1 ENSGALG00000042320 7712 1.589 - - 0.780 - - - - - - 0.809 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
54. ECI2 ENSGALG00000012809 3692 1.587 - - - - - - 0.708 - - 0.879 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
55. FECH ENSGALG00000038461 3491 1.586 - - 0.721 - - - - - - 0.865 ferrochelatase [Source:NCBI gene;Acc:374020]
56. RAD18 ENSGALG00000008368 7214 1.581 - - 0.722 - - - - - - 0.859 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
57. EAPP ENSGALG00000010007 5080 1.573 - - 0.801 - - - - - - 0.772 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
58. OAT ENSGALG00000031158 10249 1.567 - - 0.787 - - - - 0.780 - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
59. SMC5 ENSGALG00000015118 1799 1.565 - - 0.731 - - - - - - 0.834 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
60. ZC3H11A ENSGALG00000000541 2712 1.564 - - 0.783 - - - - - - 0.781 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
61. UBE2E3 ENSGALG00000020793 9517 1.551 - - 0.788 - - - - - - 0.763 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
62. TIAR TIAR 2471 1.55 - - 0.727 - - - - - - 0.823
63. NUBP1 ENSGALG00000007241 3791 1.549 - - 0.762 - - - - - - 0.787 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
64. KLHDC4 ENSGALG00000037315 9828 1.544 - - - - - - 0.759 0.785 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
65. SPG21 ENSGALG00000007262 8050 1.532 - - - - - - 0.731 - - 0.801 SPG21, maspardin [Source:NCBI gene;Acc:415526]
66. HSPA4 ENSGALG00000040882 20966 1.532 - - - - - - 0.758 - - 0.774 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
67. CXXC5 ENSGALG00000000884 16351 1.53 - - 0.793 - - - - 0.737 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
68. NUPL1 NUPL1 8197 1.523 - - 0.793 - - - 0.730 - - -
69. RFC4 ENSGALG00000008703 5842 1.516 - - 0.740 - - - 0.776 - - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
70. RPF2 ENSGALG00000037087 12788 1.516 - - - - - - 0.754 - - 0.762 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
71. ADIPOR2 ENSGALG00000035533 6523 1.516 - - 0.756 - - - - - - 0.760 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
72. TBL1XR1 ENSGALG00000039182 16983 1.514 - - - - - - 0.716 - - 0.798 transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
73. BTG1L ENSGALG00000004676 2293 1.512 - - 0.767 - - - - - - 0.745 protein BTG1-like
74. METTL23 ENSGALG00000001790 7906 1.508 - - - - - - 0.701 0.807 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
75. PSPC1 ENSGALG00000017142 13036 1.508 - - - - - - 0.719 - - 0.789 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
76. EBNA1BP2 ENSGALG00000009045 17453 1.507 - - - - - - 0.701 - - 0.806 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
77. SLC25A13 ENSGALG00000009728 8858 1.506 - - - - - - 0.750 - - 0.756 solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
78. TTPAL ENSGALG00000004244 2734 1.504 - - 0.791 - - - 0.713 - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
79. RPL26 RPL26 343071 1.498 - - 0.701 - - - - - - 0.797
80. C1orf21 ENSGALG00000020922 4035 1.493 - - 0.783 - - - 0.710 - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
81. NOC4L ENSGALG00000002272 9644 1.492 - - - - - - 0.737 - - 0.755 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
82. TMEM167A ENSGALG00000027332 13862 1.488 - - 0.756 - - - 0.732 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
83. NDUFC2 ENSGALG00000029172 26136 1.473 - - 0.761 - - - 0.712 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
84. ARID3B ENSGALG00000001376 4290 1.457 - - 0.732 - - - - - - 0.725 AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]
85. ERBB2IP ERBB2IP 5800 1.448 - - - - - - 0.734 - - 0.714
86. ATG5 ENSGALG00000015387 7752 1.447 - - 0.727 - - - 0.720 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
87. DNAJC3 ENSGALG00000016894 9048 1.443 - - - - - - 0.704 - - 0.739 DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
88. PSMB2 ENSGALG00000026421 51885 1.433 - - 0.722 - - - 0.711 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
89. EIF2S3 ENSGALG00000016340 48073 1.423 - - - - - - - 0.708 - 0.715 eukaryotic translation initiation factor 2 subunit gamma [Source:NCBI gene;Acc:418597]
90. GLO1 ENSGALG00000010127 31662 1.419 - - - - - - 0.715 - - 0.704 glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
91. LOC776067 ENSGALG00000016808 9164 1.415 - - - - - - 0.705 - - 0.710 E3 SUMO-protein ligase RanBP2-like, transcript variant X50
92. GPC4 ENSGALG00000006080 56498 1.412 - - - - - - 0.704 0.708 - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
93. BRD1 ENSGALG00000029379 6047 0.974 - - - - - - - - - 0.974 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
94. TMEM128 ENSGALG00000014992 6567 0.972 - - - - - - - - - 0.972 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
95. NARS ENSGALG00000040506 9506 0.972 - - - - - - - - - 0.972 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
96. PGD ENSGALG00000002797 15115 0.971 - - - - - - - - - 0.971 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
97. MB21D1 2460 0.971 - - - - - - - - - 0.971 Mab-21 domain containing 1
98. PCLO 249 0.971 - - - - - - - - - 0.971 piccolo presynaptic cytomatrix protein
99. DIAPH3 ENSGALG00000016937 1069 0.97 - - - - - - - - - 0.970 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
100. ZNF106 ENSGALG00000009081 1520 0.97 - - - - - - - - - 0.970 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA