Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAD23B

Gene Name Gene ID Reads Annotation
RAD23B ENSGALG00000015540 10828 RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]











Genes with expression patterns similar to RAD23B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAD23B ENSGALG00000015540 10828 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
2. EDNRA ENSGALG00000010013 2472 1.898 - - - - 0.944 - - 0.954 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
3. NEK6 ENSGALG00000001118 20333 1.754 - - - - 0.921 - 0.833 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
4. BMS1 ENSGALG00000002624 8339 1.739 - - - - - - 0.783 0.956 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
5. AMD1 ENSGALG00000039575 8900 1.737 - - - - - - 0.799 0.938 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
6. GSPT1 15580 1.736 - - - - 0.875 - 0.861 - - - G1 to S phase transition 1, transcript variant X1
7. CHMP5 ENSGALG00000013160 13347 1.708 - - - - 0.915 - 0.793 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
8. PSMD3 ENSGALG00000033162 25615 1.699 - - - - 0.930 - 0.769 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
9. PRCC ENSGALG00000040696 9346 1.698 - - - - 0.937 - 0.761 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
10. ANKRD10 ENSGALG00000030125 3611 1.681 - - - - - - 0.730 0.951 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
11. DLD ENSGALG00000007931 11011 1.68 - - - - 0.936 - 0.744 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
12. HSF2 ENSGALG00000038420 5259 1.68 - - - - 0.950 - - - 0.730 - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
13. GABARAPL2 ENSGALG00000003208 9195 1.679 - - - - 0.918 - 0.761 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
14. SPEN ENSGALG00000036932 9688 1.678 - - - - 0.928 - 0.750 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
15. ERBB2IP ERBB2IP 5800 1.667 - - - - - - 0.715 0.952 - -
16. GTF2H3 ENSGALG00000023682 9914 1.662 - - - - - - 0.705 0.957 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
17. CEP78 ENSGALG00000015179 5227 1.659 - - - - 0.889 - 0.770 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
18. PSMC3 ENSGALG00000008108 22922 1.657 - - - - - - 0.748 0.909 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
19. MBNL3 ENSGALG00000032045 10980 1.654 - - - - - - 0.724 0.930 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
20. SNX9 ENSGALG00000013710 5295 1.642 - - - - - - 0.703 0.939 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
21. ENSGALG00000002903 ENSGALG00000002903 18304 1.642 - - - - - - 0.831 0.811 - -
22. LMAN2 ENSGALG00000033232 11740 1.64 - - - - 0.932 - 0.708 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
23. SRGAP1 ENSGALG00000009825 6753 1.633 - - - - 0.927 - 0.706 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
24. ZDHHC6 ENSGALG00000008870 16575 1.627 - - - - 0.899 - - 0.728 - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
25. EIF3B ENSGALG00000040999 49971 1.624 - - - - 0.845 - 0.779 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
26. G3BP1 ENSGALG00000004160 36795 1.618 - - - - 0.875 - 0.743 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
27. PSPC1 ENSGALG00000017142 13036 1.612 - - - - - - 0.716 0.896 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
28. UMPS ENSGALG00000011770 11331 1.604 - - - - 0.902 - 0.702 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
29. WDR51B WDR51B 5757 1.547 - - - - - - 0.790 0.757 - -
30. ACTR2 ENSGALG00000008779 17812 1.545 - - - - - - 0.713 0.832 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
31. FANCG ENSGALG00000002009, ENSGALG00000034209 2528 1.528 - - - - - - 0.722 - - 0.806 Fanconi anemia complementation group G, transcript variant X1
32. MAN2A1 ENSGALG00000000255 4543 1.528 - - - - - - 0.741 0.787 - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
33. PTEN ENSGALG00000003634 5048 1.527 - - - - - - 0.717 0.810 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
34. CSNK2A1 ENSGALG00000006197 41409 1.524 - - - - 0.796 - 0.728 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
35. LSM5 ENSGALG00000041625 22307 1.518 - - - - 0.801 - 0.717 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
36. MRPS18A ENSGALG00000010296 11039 1.517 - - - - - - 0.802 - - 0.715 mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
37. UQCRC2 ENSGALG00000002490 23477 1.509 - - - - - - 0.756 0.753 - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
38. ATR ENSGALG00000002663 4626 1.48 - - - - - - 0.739 - 0.741 - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
39. TPD52 ENSGALG00000040167 9891 1.44 - - - - - - 0.733 - - 0.707 tumor protein D52 [Source:NCBI gene;Acc:770339]
40. MTMR12 ENSGALG00000003168 1130 1.436 - - - - - - 0.708 - - 0.728 myotubularin related protein 12 [Source:HGNC Symbol;Acc:HGNC:18191]
41. CKLF ENSGALG00000005254 3365 1.421 - - - - - - - - 0.710 0.711 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
42. AP1B1 ENSGALG00000042213 4828 0.964 - - - - - - - 0.964 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
43. ACTA1 ENSGALG00000011086 2543 0.96 - - - - - - - 0.960 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
44. LAMA5 486 0.96 - - - - - - - 0.960 - - laminin subunit alpha 5, transcript variant X3
45. TLCD2 ENSGALG00000021592 1166 0.96 - - - - - - - 0.960 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
46. ZNF318 ENSGALG00000034040 1758 0.959 - - - - - - - 0.959 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
47. TUBD1 ENSGALG00000005173 1364 0.959 - - - - - - - 0.959 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
48. REPS2 ENSGALG00000016545 3347 0.959 - - - - - - - 0.959 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
49. RNF19B ENSGALG00000039716 662 0.959 - - - - - - - 0.959 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
50. CENPJ ENSGALG00000017148 1415 0.959 - - - - - - - 0.959 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
51. TM9SF3 ENSGALG00000005534 15290 0.959 - - - - 0.959 - - - - - transmembrane 9 superfamily member 3
52. CNTRL ENSGALG00000001513 1773 0.959 - - - - - - - 0.959 - - centriolin [Source:NCBI gene;Acc:417121]
53. QSOX2 ENSGALG00000001758 638 0.959 - - - - - - - 0.959 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
54. RPAIN ENSGALG00000001666 2676 0.958 - - - - - - - 0.958 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
55. LIMCH1 ENSGALG00000014258 1987 0.958 - - - - - - - 0.958 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
56. VPRBP VPRBP 4037 0.958 - - - - - - - 0.958 - -
57. BYSL ENSGALG00000003467 7555 0.958 - - - - - - - 0.958 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
58. NCAPG2 ENSGALG00000006525 2319 0.958 - - - - - - - 0.958 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
59. EVX1 ENSGALG00000037310 1974 0.958 - - - - - - - 0.958 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
60. NQO2 ENSGALG00000025747 2287 0.958 - - - - - - - 0.958 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
61. SETD9 ENSGALG00000014719 5081 0.958 - - - - - - - 0.958 - - SET domain containing 9, transcript variant X2
62. SGCB ENSGALG00000013968 3214 0.957 - - - - - - - 0.957 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
63. ANKRD46 ENSGALG00000041445 3791 0.955 - - - - - - - 0.955 - - ankyrin repeat domain 46, transcript variant X1
64. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.955 - - - - - - - 0.955 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
65. STX8 ENSGALG00000001238 7403 0.955 - - - - - - - 0.955 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
66. SOS1 ENSGALG00000039450 3941 0.955 - - - - - - - 0.955 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
67. AKAP2 ENSGALG00000015656 4310 0.955 - - - - - - - 0.955 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
68. FRAS1 ENSGALG00000010316 5008 0.955 - - - - - - - 0.955 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
69. C9orf78 ENSGALG00000004152 7140 0.955 - - - - - - - 0.955 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
70. GTF2A1 ENSGALG00000010576 4570 0.954 - - - - - - - 0.954 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
71. AMACR ENSGALG00000003326 2657 0.954 - - - - - - - 0.954 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
72. TAPA1 TAPA1 8669 0.953 - - - - - - - 0.953 - -
73. LGMN ENSGALG00000010811 7401 0.953 - - - - 0.953 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
74. WDHD1 ENSGALG00000012199 3570 0.953 - - - - - - - 0.953 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
75. PBRM1 ENSGALG00000037455 6450 0.953 - - - - 0.953 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
76. ACSF2 ENSGALG00000019768 2727 0.953 - - - - - - - 0.953 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
77. MPHOSPH8 ENSGALG00000017145 6280 0.952 - - - - - - - 0.952 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
78. MRPL16 ENSGALG00000029419 8033 0.951 - - - - 0.951 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
79. MED21 ENSGALG00000027435 5766 0.951 - - - - 0.951 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
80. GPR27 ENSGALG00000027091 8111 0.95 - - - - - - - 0.950 - - G protein-coupled receptor 27
81. SUPV3L1 ENSGALG00000004197 4141 0.95 - - - - - - - 0.950 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
82. MON2 ENSGALG00000009795 3868 0.95 - - - - - - - 0.950 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
83. DGKZ ENSGALG00000008380 5389 0.949 - - - - 0.949 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
84. TIMMDC1 ENSGALG00000024480 9337 0.949 - - - - 0.949 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
85. NAP1L1 ENSGALG00000010238 14506 0.949 - - - - - - - 0.949 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
86. SNX14 ENSGALG00000015831 2554 0.948 - - - - 0.948 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
87. CDH3 5050 0.948 - - - - 0.948 - - - - - cadherin 3
88. UPF3B ENSGALG00000008618 12350 0.948 - - - - 0.948 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
89. LZIC ENSGALG00000002616 9052 0.947 - - - - 0.947 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
90. MINOS1 ENSGALG00000004039 37740 0.946 - - - - 0.946 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
91. MRPS35 ENSGALG00000036730 6327 0.946 - - - - - - - 0.946 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
92. GNG2 ENSGALG00000027629 9404 0.946 - - - - - - - 0.946 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
93. RALGDS ENSGALG00000003412 4478 0.945 - - - - 0.945 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
94. PITHD1 ENSGALG00000003986 11470 0.945 - - - - 0.945 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
95. Mar-05 Mar-05 6330 0.945 - - - - 0.945 - - - - -
96. CDKN1B ENSGALG00000022980 4606 0.944 - - - - 0.944 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
97. SYNE1 ENSGALG00000013505 2324 0.944 - - - - 0.944 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
98. IARS2 ENSGALG00000009566 4599 0.944 - - - - 0.944 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
99. NDUFV1 ENSGALG00000042809 6222 0.943 - - - - 0.943 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
100. UBE2D3 ENSGALG00000012311 39831 0.943 - - - - 0.943 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]

There are 789 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA