Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAD18

Gene Name Gene ID Reads Annotation
RAD18 ENSGALG00000008368 7214 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]











Genes with expression patterns similar to RAD18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAD18 ENSGALG00000008368 7214 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
2. GTF2E1 ENSGALG00000042320 7712 2.433 - - 0.785 - - - - 0.928 - 0.720 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
3. ODF2 ENSGALG00000004767 3972 1.829 - - - - - - - 0.994 - 0.835 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
4. SMC4 ENSGALG00000009553 15715 1.778 - - 0.874 - - - - - - 0.904 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
5. WDR53 ENSGALG00000006395 4938 1.758 - - - - - - - 0.972 - 0.786 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
6. TWISTNB ENSGALG00000010863 7563 1.734 - - - - - - 0.739 0.995 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
7. SEC22B ENSGALG00000039704 16080 1.73 - - 0.760 - - - - 0.970 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
8. WHSC1 1712 1.717 - - 0.837 - - - - - - 0.880 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
9. CCNA2 ENSGALG00000011881 2574 1.706 - - 0.802 - - - - - - 0.904 cyclin A2 [Source:NCBI gene;Acc:396172]
10. HYAL3 ENSGALG00000029000 712 1.7 - - 0.814 - - - - - - 0.886 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
11. CAMSAP1 ENSGALG00000001692 2617 1.693 - - 0.795 - - - - - - 0.898 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
12. CRCP ENSGALG00000002587 8809 1.689 - - 0.811 - - - - - - 0.878 CGRP receptor component [Source:NCBI gene;Acc:396022]
13. WBP4 ENSGALG00000016949 5858 1.664 - - 0.751 - - - - - - 0.913 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
14. PLOD2 ENSGALG00000006783 22789 1.647 - - 0.734 - - - - 0.913 - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
15. ATP6V0C ENSGALG00000009229 125870 1.642 - - 0.830 - - - - - - 0.812 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
16. ENSGALG00000028992 ENSGALG00000028992 185077 1.622 - - 0.715 - - - - - - 0.907
17. GTF2F2 ENSGALG00000016974 7524 1.594 - - - - - - - 0.729 - 0.865 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
18. SLK ENSGALG00000008318 2220 1.593 - - 0.765 - - - - - - 0.828 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
19. NAA30 ENSGALG00000012098 4681 1.592 - - 0.759 - - - - - - 0.833 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
20. CNTRL ENSGALG00000001513 1773 1.588 - - 0.706 - - - - - - 0.882 centriolin [Source:NCBI gene;Acc:417121]
21. HNRNPLL ENSGALG00000008504 14719 1.587 - - 0.811 - - - - - - 0.776 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
22. TWSG1 ENSGALG00000008400 1869 1.586 - - 0.719 - - - - - - 0.867 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
23. RAD50 ENSGALG00000006794 4308 1.581 - - 0.722 - - - - - - 0.859 RAD50 double strand break repair protein, transcript variant X4
24. SLC39A6 ENSGALG00000013209 1754 1.572 - - 0.729 - - - - - - 0.843 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
25. RAB10 ENSGALG00000016535 5272 1.572 - - 0.764 - - - - - - 0.808 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
26. SP3 ENSGALG00000031796 8997 1.57 - - 0.701 - - - - - - 0.869 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
27. RBBP8 ENSGALG00000014982 3255 1.569 - - 0.711 - - - - - - 0.858 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
28. PRPF38B ENSGALG00000001972 2009 1.565 - - 0.748 - - - - - - 0.817 pre-mRNA processing factor 38B
29. USP10 ENSGALG00000005674 7768 1.562 - - - - - - - 0.797 - 0.765 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
30. FZD6 ENSGALG00000030626 3336 1.562 - - 0.736 - - - - - - 0.826 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
31. RPL26 RPL26 343071 1.554 - - 0.763 - - - - - - 0.791
32. CIB1 ENSGALG00000008302 13946 1.552 - - - - - - 0.764 - - 0.788 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
33. QSER1 ENSGALG00000012030 4490 1.535 - - 0.740 - - - - - - 0.795 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
34. TIAR TIAR 2471 1.531 - - 0.712 - - - - - - 0.819
35. UBE2E3 ENSGALG00000020793 9517 1.49 - - 0.777 - - - - - - 0.713 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
36. RBM19 ENSGALG00000008289 10702 1.488 - - - - - - - 0.761 - 0.727 RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
37. MYO5A ENSGALG00000031987 2469 1.457 - - 0.746 - - - - - - 0.711 myosin VA [Source:NCBI gene;Acc:396237]
38. LARP7 ENSGALG00000012048 8393 1.451 - - 0.702 - - - - 0.749 - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
39. ARL6IP4 ENSGALG00000003682 2467 0.999 - - - - - - - 0.999 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
40. UBE4A ENSGALG00000031134 5851 0.999 - - - - - - - 0.999 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
41. EDEM2 ENSGALG00000003128 3338 0.999 - - - - - - - 0.999 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
42. XPNPEP3 ENSGALG00000012003 2253 0.999 - - - - - - - 0.999 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
43. ENSGALG00000023314 ENSGALG00000023314 6331 0.999 - - - - - - - 0.999 - -
44. OGG1 ENSGALG00000006651 1320 0.999 - - - - - - - 0.999 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
45. MYL2 ENSGALG00000004582 2245 0.999 - - - - - - - 0.999 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
46. SORD ENSGALG00000031408 2119 0.999 - - - - - - - 0.999 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
47. RNF2 ENSGALG00000037219 2299 0.999 - - - - - - - 0.999 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
48. XRCC2 ENSGALG00000026865 2214 0.999 - - - - - - - 0.999 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
49. MAMLD1 ENSGALG00000009098 1231 0.999 - - - - - - - 0.999 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
50. H1F0 ENSGALG00000044240 1206 0.999 - - - - - - - 0.999 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
51. RNF19A ENSGALG00000038772 380 0.999 - - - - - - - 0.999 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
52. GPR180 ENSGALG00000016897 1545 0.999 - - - - - - - 0.999 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
53. CDC26 ENSGALG00000026095 3491 0.999 - - - - - - - 0.999 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
54. FOPNL ENSGALG00000006532 2922 0.999 - - - - - - - 0.999 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
55. ROR1 ENSGALG00000011019 2155 0.998 - - - - - - - 0.998 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
56. CDCA2 ENSGALG00000045842 2236 0.998 - - - - - - - 0.998 - - cell division cycle associated 2, transcript variant X3
57. NARG2 NARG2 2294 0.997 - - - - - - - 0.997 - -
58. MPP7 ENSGALG00000007408 2485 0.997 - - - - - - - 0.997 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
59. EMCN EMCN 2637 0.997 - - - - - - - 0.997 - -
60. RASSF2 ENSGALG00000030432 4822 0.996 - - - - - - - 0.996 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
61. ENSGALG00000027854 ENSGALG00000027854 5007 0.995 - - - - - - - 0.995 - -
62. CCDC12 ENSGALG00000005487 8190 0.995 - - - - - - - 0.995 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
63. USP20 ENSGALG00000041104 3186 0.992 - - - - - - - 0.992 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
64. RBM27 ENSGALG00000007516 3909 0.992 - - - - - - - 0.992 - - RNA binding motif protein 27, transcript variant X3
65. TSPO2 ENSGALG00000003212 5141 0.99 - - - - - - - 0.990 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
66. ALDH4A1 ENSGALG00000042184 9432 0.988 - - - - - - - 0.988 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
67. C1H12ORF23 C1H12ORF23 13234 0.987 - - - - - - - 0.987 - -
68. TRABD ENSGALG00000030705 6577 0.986 - - - - - - - 0.986 - - TraB domain containing [Source:NCBI gene;Acc:417746]
69. HSPA14 ENSGALG00000035201 7372 0.986 - - - - - - - 0.986 - - heat shock protein family A (Hsp70) member 14
70. PHKG1 ENSGALG00000002485 15214 0.985 - - - - - - - 0.985 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
71. MTFR1 ENSGALG00000038385 9419 0.975 - - - - - - - 0.975 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
72. CZH9ORF100 CZH9ORF100 4268 0.974 - - - - - - - 0.974 - -
73. KCTD2 ENSGALG00000007934 15085 0.974 - - - - - - - 0.974 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
74. PPIF ENSGALG00000004809 5586 0.973 - - - - - - - 0.973 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
75. C26H6ORF125 ENSGALG00000002881 15827 0.973 - - - - - - - 0.973 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
76. GTF2B ENSGALG00000006205 6950 0.97 - - - - - - - 0.970 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
77. SNF8 ENSGALG00000001309 7398 0.965 - - - - - - - 0.965 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
78. HSF2BP ENSGALG00000016202 1696 0.959 - - - - - - - 0.959 - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
79. SOD2 ENSGALG00000011661 13178 0.955 - - - - - - - 0.955 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
80. NIPSNAP3L ENSGALG00000027334 7514 0.948 - - - - - - - 0.948 - - nipsnap homolog 3-like
81. SAR1A ENSGALG00000004431 28833 0.943 - - - - - - - 0.943 - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
82. WDR43 ENSGALG00000032529 12235 0.938 - - - - - - - 0.938 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
83. ANXA11 ENSGALG00000043826 5189 0.937 - - - - - - - 0.937 - - annexin A11 [Source:NCBI gene;Acc:423637]
84. TMEM183A ENSGALG00000000223 6915 0.934 - - - - - - - 0.934 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
85. SLC27A4 ENSGALG00000004965 3278 0.921 - - - - - - - 0.921 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
86. CCDC93 ENSGALG00000012129 2405 0.921 - - - - - - - 0.921 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
87. ZRANB1 ENSGALG00000031474 3909 0.921 - - - - - - - - - 0.921 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
88. TXNDC5 ENSGALG00000012784 4678 0.921 - - - - - - - - - 0.921 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
89. CPNE1 ENSGALG00000040856 610 0.92 - - - - - - - - - 0.920 copine 1 [Source:NCBI gene;Acc:419134]
90. RTN4R ENSGALG00000007732 1515 0.919 - - - - - - - - - 0.919 reticulon 4 receptor
91. TP53BP1 ENSGALG00000042201 708 0.919 - - - - - - - - - 0.919 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
92. CTSO ENSGALG00000009373 4186 0.916 - - - - - - - - - 0.916 cathepsin O [Source:NCBI gene;Acc:422410]
93. TRPC4AP ENSGALG00000003147 3967 0.916 - - - - - - - - - 0.916 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
94. STX7 ENSGALG00000034374 4695 0.913 - - - - - - - 0.913 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
95. RAB2A ENSGALG00000015450 990 0.913 - - - - - - - 0.913 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
96. THG1L ENSGALG00000003722 7497 0.912 - - - - - - - 0.912 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
97. PREX2 ENSGALG00000042354 134 0.912 - - - - - - - - - 0.912 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
98. SPDL1 ENSGALG00000001942 4403 0.911 - - - - - - - - - 0.911 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
99. TANGO2 ENSGALG00000002056 1971 0.911 - - - - - - - - - 0.911 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
100. TMEM130 ENSGALG00000003569 949 0.911 - - - - - - - - - 0.911 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]

There are 780 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA