Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAD1

Gene Name Gene ID Reads Annotation
RAD1 ENSGALG00000003365 1417 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]











Genes with expression patterns similar to RAD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAD1 ENSGALG00000003365 1417 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
2. SMOC2 ENSGALG00000011205 340 1.791 - - 0.937 - - - - - - 0.854 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
3. ITM2B ENSGALG00000016996 1112 1.75 - - 0.954 - - - - - - 0.796 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
4. PTPN2 ENSGALG00000013867 1128 1.746 - - 0.919 - - - - - - 0.827 protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
5. LRRC42 ENSGALG00000010743 384 1.701 - - 0.945 - - - - - - 0.756 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
6. SETD1B ENSGALG00000004324 2897 1.69 - - 0.920 - - - - - - 0.770 SET domain containing 1B [Source:NCBI gene;Acc:416851]
7. NAA30 ENSGALG00000012098 4681 1.615 - - 0.839 - - - 0.776 - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
8. ZNF385D ENSGALG00000011283 2578 1.583 - - 0.881 - - - - - - 0.702 zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
9. FTD FTD 3041 1.579 - - 0.868 - - - 0.711 - - -
10. EIF2B4 ENSGALG00000033575 3801 1.555 - - 0.778 - - - - - - 0.777 eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
11. NAB1 ENSGALG00000037778 3467 1.536 - - 0.786 - - - 0.750 - - - NGFI-A binding protein 1 [Source:NCBI gene;Acc:374126]
12. FARP1 ENSGALG00000016886 13132 1.534 - - 0.745 - - - 0.789 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
13. SPCS3 ENSGALG00000010839 19106 1.528 - - 0.797 - - - 0.731 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
14. ZNHIT3 ENSGALG00000026031 8652 1.431 - - 0.705 - - - 0.726 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
15. L3MBTL3 ENSGALG00000034030 113 0.959 - - 0.959 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
16. NXPE3 ENSGALG00000015344 111 0.959 - - 0.959 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
17. ENSGALG00000020103 ENSGALG00000020103 64 0.958 - - 0.958 - - - - - - -
18. TCTN2 ENSGALG00000023683 3596 0.958 - - 0.958 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
19. TRIM13 ENSGALG00000017011 92 0.957 - - 0.957 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
20. SZT2 ENSGALG00000028561 255 0.957 - - 0.957 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
21. BBX ENSGALG00000015353 1281 0.956 - - 0.956 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
22. CA9 ENSGALG00000021340 1431 0.955 - - 0.955 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
23. MRC2 ENSGALG00000000461 48 0.954 - - 0.954 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
24. YBX3 ENSGALG00000031890 819 0.954 - - 0.954 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
25. ENSGALG00000028964 ENSGALG00000028964 46 0.954 - - 0.954 - - - - - - -
26. UEVLD ENSGALG00000006342 164 0.954 - - 0.954 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
27. TDRD6 48 0.954 - - 0.954 - - - - - - - tudor domain containing 6
28. SLC3A1 ENSGALG00000009973 608 0.954 - - 0.954 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
29. ABCC3 ENSGALG00000007522 340 0.954 - - 0.954 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
30. ITGB4 ENSGALG00000002389 44 0.954 - - 0.954 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
31. U4 U4 69 0.953 - - 0.953 - - - - - - -
32. BBS5 ENSGALG00000009846 344 0.953 - - 0.953 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
33. GDPD4 ENSGALG00000000690 824 0.953 - - 0.953 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
34. OSGIN2 ENSGALG00000042840 83 0.953 - - 0.953 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
35. CDC14B ENSGALG00000012627 110 0.953 - - 0.953 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
36. PTDSS2 ENSGALG00000004300 682 0.952 - - 0.952 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
37. MED12 ENSGALG00000036322 814 0.952 - - 0.952 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
38. DBN1 ENSGALG00000033405 216 0.951 - - 0.951 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
39. CLEC16A ENSGALG00000007167 66 0.951 - - 0.951 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
40. RQCD1 RQCD1 110 0.951 - - 0.951 - - - - - - -
41. PRUNE PRUNE 452 0.951 - - 0.951 - - - - - - -
42. FAM134C 860 0.951 - - 0.951 - - - - - - - family with sequence similarity 134 member C
43. CHAMP1 ENSGALG00000016813 508 0.95 - - 0.950 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
44. AKAP10 ENSGALG00000004679 103 0.95 - - 0.950 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. RAD54L2 ENSGALG00000003243 187 0.95 - - 0.950 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
46. PCDH17 ENSGALG00000016941 1006 0.95 - - 0.950 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
47. FBXL5 ENSGALG00000014510 245 0.95 - - 0.950 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
48. ENSGALG00000004703 ENSGALG00000004703 112 0.95 - - 0.950 - - - - - - -
49. ABCE1 ENSGALG00000009961 958 0.949 - - 0.949 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
50. F2R ENSGALG00000014983 106 0.949 - - 0.949 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
51. RECQL ENSGALG00000013174 1323 0.949 - - 0.949 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
52. ENSGALG00000002020 ENSGALG00000002020 183 0.949 - - 0.949 - - - - - - -
53. TTPAL ENSGALG00000004244 2734 0.948 - - 0.948 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
54. RPS6KB1 ENSGALG00000005198 169 0.948 - - 0.948 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
55. SMARCAD1 ENSGALG00000037339 149 0.948 - - 0.948 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
56. SLC37A3 ENSGALG00000012849 836 0.948 - - 0.948 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
57. AASDHPPT ENSGALG00000027981 1017 0.947 - - 0.947 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
58. GTF2H2 ENSGALG00000002399 2361 0.947 - - 0.947 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
59. TUBGCP3 ENSGALG00000016836 332 0.945 - - 0.945 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
60. CEP104 ENSGALG00000000978 1130 0.945 - - 0.945 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
61. NGF ENSGALG00000002556 122 0.945 - - 0.945 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
62. WAPAL WAPAL 625 0.945 - - 0.945 - - - - - - -
63. MLLT3 ENSGALG00000015078 502 0.945 - - 0.945 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
64. CHGA ENSGALG00000010820 1028 0.945 - - 0.945 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
65. KCTD3 ENSGALG00000009678 335 0.945 - - 0.945 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
66. LRRC71 ENSGALG00000027351 695 0.944 - - 0.944 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
67. NDUFB1 ENSGALG00000028537 2059 0.943 - - 0.943 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
68. ATP8B4 ENSGALG00000002326 456 0.943 - - 0.943 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
69. TLE1 ENSGALG00000012575 2047 0.942 - - 0.942 - - - - - - - transducin like enhancer of split 1 [Source:HGNC Symbol;Acc:HGNC:11837]
70. TMEM242 ENSGALG00000013689 377 0.94 - - 0.940 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
71. NACAD 679 0.939 - - 0.939 - - - - - - - NAC alpha domain containing, transcript variant X1
72. ADK ENSGALG00000005057 199 0.938 - - 0.938 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
73. RFK ENSGALG00000033558 1364 0.937 - - 0.937 - - - - - - - riboflavin kinase, transcript variant X3
74. MED15 ENSGALG00000006430 814 0.936 - - 0.936 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
75. CAMSAP1 ENSGALG00000001692 2617 0.936 - - 0.936 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
76. CENPO ENSGALG00000016609 1699 0.935 - - 0.935 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
77. TUBA4A ENSGALG00000000433 1367 0.935 - - 0.935 - - - - - - - tubulin alpha 4a
78. SNX14 ENSGALG00000015831 2554 0.935 - - 0.935 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
79. IFT57 ENSGALG00000015356 5540 0.934 - - 0.934 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
80. MIB1 ENSGALG00000014974 3583 0.932 - - 0.932 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
81. DDX6 ENSGALG00000033064 2193 0.932 - - 0.932 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
82. WDR92 ENSGALG00000008760 3934 0.932 - - 0.932 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
83. GFER ENSGALG00000005579 1367 0.932 - - 0.932 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
84. WHSC1 1712 0.931 - - 0.931 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
85. APTX ENSGALG00000001954 692 0.931 - - 0.931 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
86. FBXO45 ENSGALG00000037281 3936 0.931 - - 0.931 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
87. PCYT1B 190 0.93 - - 0.930 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
88. ATF7IP ENSGALG00000011814 1571 0.93 - - 0.930 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
89. MRPS33 ENSGALG00000028879 17966 0.93 - - 0.930 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
90. IFT81 ENSGALG00000003854 2534 0.93 - - 0.930 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
91. TFAP2C ENSGALG00000007690 768 0.929 - - 0.929 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
92. RRN3 ENSGALG00000041989 3934 0.929 - - 0.929 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
93. HOXA7 ENSGALG00000026989 6746 0.928 - - 0.928 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
94. LPCAT3 ENSGALG00000014570 7919 0.928 - - 0.928 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
95. ENSGALG00000008689 ENSGALG00000008689 232 0.928 - - 0.928 - - - - - - -
96. SGCE ENSGALG00000009670 3070 0.927 - - 0.927 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
97. SELM SELM 6366 0.927 - - 0.927 - - - - - - -
98. RALGDS ENSGALG00000003412 4478 0.927 - - 0.927 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
99. PCYOX1 ENSGALG00000013878 2200 0.927 - - 0.927 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
100. SOBP ENSGALG00000043047 147 0.927 - - 0.927 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]

There are 602 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA