Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RABIF

Gene Name Gene ID Reads Annotation
RABIF ENSGALG00000000436 6449 RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]











Genes with expression patterns similar to RABIF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RABIF ENSGALG00000000436 6449 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
2. COMMD10 ENSGALG00000002308 7442 1.709 - - - - - - 0.775 0.934 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
3. PMPCA ENSGALG00000001950 6766 1.683 - - - - - - 0.866 0.817 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
4. ZDHHC14 ENSGALG00000013695 2648 1.68 - - - - - - 0.759 0.921 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
5. KRR1 ENSGALG00000010227 11783 1.668 - - - - - - 0.737 0.931 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
6. RERE ENSGALG00000002232 8724 1.632 - - - - - - 0.715 0.917 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
7. C14orf1 C14orf1 14289 1.629 - - - - - - 0.702 0.927 - -
8. ATG3 ENSGALG00000015204 11277 1.615 - - - - - - 0.753 0.862 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
9. MORF4L1 ENSGALG00000008146 29940 1.59 - - - - - - 0.714 0.876 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
10. LSM5 ENSGALG00000041625 22307 1.586 - - - - - - 0.769 0.817 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
11. EHD3 ENSGALG00000009086 14407 1.547 - - - - - - 0.714 0.833 - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
12. WASF1 ENSGALG00000015066 5628 1.506 - - - - - - 0.710 0.796 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
13. METAP2 ENSGALG00000011377 16311 1.485 - - - - - - 0.728 0.757 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
14. SPTSSA ENSGALG00000025755 3361 1.473 - - - - - - 0.703 - 0.770 - serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
15. SREK1IP1 ENSGALG00000026028 5756 1.469 - - - - - - 0.750 - 0.719 - SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
16. BCAR1 ENSGALG00000042895 8222 0.987 - - - - - - - 0.987 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
17. RIOK3 ENSGALG00000015004 4249 0.983 - - - - - - - 0.983 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
18. FYTTD1 ENSGALG00000007581 9341 0.949 - - - - - - - 0.949 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
19. PSMC3IP ENSGALG00000019741 5428 0.938 - - - - - - - 0.938 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
20. ADAT1 ENSGALG00000000908 1484 0.937 - - - - - - - 0.937 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
21. ASAH1 ENSGALG00000026364 2783 0.936 - - - - - - - 0.936 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
22. PI4K2B ENSGALG00000031538 2607 0.936 - - - - - - - 0.936 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
23. MAN2C1 ENSGALG00000001615 2362 0.936 - - - - - - - 0.936 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
24. DCAF4 ENSGALG00000009345 2604 0.935 - - - - - - - 0.935 - - DDB1 and CUL4 associated factor 4
25. COMMD8 ENSGALG00000026279 13509 0.935 - - - - - - - 0.935 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
26. KIF21A ENSGALG00000007098 5919 0.935 - - - - - - - 0.935 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
27. FOCAD ENSGALG00000015071 3677 0.935 - - - - - - - 0.935 - - focadhesin [Source:NCBI gene;Acc:427233]
28. CREG1 ENSGALG00000040426 1188 0.935 - - - - - - - 0.935 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
29. EXOC8 ENSGALG00000043280 3596 0.934 - - - - - - - 0.934 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
30. HGS ENSGALG00000007224 3487 0.934 - - - - - - - 0.934 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
31. PALB2 ENSGALG00000006078 1549 0.934 - - - - - - - 0.934 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
32. TP73 ENSGALG00000001006 335 0.934 - - - - - - - 0.934 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
33. IQCK ENSGALG00000028197 596 0.934 - - - - - - - 0.934 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
34. DACT1 ENSGALG00000012023 1008 0.934 - - - - - - - 0.934 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
35. KIF18B ENSGALG00000031553 3192 0.934 - - - - - - - 0.934 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
36. DDX54 ENSGALG00000007490 8729 0.934 - - - - - - - 0.934 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
37. ERP44 ENSGALG00000013452 5352 0.934 - - - - - - - 0.934 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
38. NHLRC1 ENSGALG00000012688 1476 0.934 - - - - - - - 0.934 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
39. MRPL22 ENSGALG00000003919 2760 0.933 - - - - - - - 0.933 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
40. AIF1L ENSGALG00000029834 13866 0.933 - - - - - - - 0.933 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
41. RFWD2 1215 0.932 - - - - - - - 0.932 - - ring finger and WD repeat domain 2, transcript variant X6
42. NDUFA9 ENSGALG00000017282 14358 0.932 - - - - - - - 0.932 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
43. DRG1 ENSGALG00000006921 10791 0.93 - - - - - - - 0.930 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
44. NUMA1 ENSGALG00000001258 8406 0.926 - - - - - - - 0.926 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
45. PIGQ ENSGALG00000001985 1584 0.924 - - - - - - - 0.924 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
46. GTF3A ENSGALG00000017098 9264 0.922 - - - - - - - 0.922 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
47. SS18 ENSGALG00000015119 4687 0.919 - - - - - - - 0.919 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
48. ISY1 ENSGALG00000005012 7477 0.919 - - - - - - - 0.919 - - ISY1 splicing factor homolog
49. COMT ENSGALG00000002024 2483 0.917 - - - - - - - 0.917 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
50. LIX1 ENSGALG00000015290 7589 0.916 - - - - - - - 0.916 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
51. GREB1 ENSGALG00000016455 12794 0.884 - - - - - - - 0.884 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
52. EI24 ENSGALG00000038097 24081 0.878 - - - - - - - 0.878 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
53. DLD ENSGALG00000007931 11011 0.875 - - - - - - 0.875 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
54. MFAP1 ENSGALG00000028295 6043 0.873 - - - - - - 0.873 - - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
55. NOP58 ENSGALG00000008454 34630 0.872 - - - - - - 0.872 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
56. TUBB6 ENSGALG00000031275 17690 0.871 - - - - - - - 0.871 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
57. NDUFC2 ENSGALG00000029172 26136 0.868 - - - - - - 0.868 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
58. UTP11L UTP11L 11927 0.867 - - - - - - 0.867 - - -
59. SNRNP40 ENSGALG00000000615 32298 0.866 - - - - - - 0.866 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
60. TFB2M ENSGALG00000010651 4374 0.865 - - - - - - 0.865 - - - transcription factor B2, mitochondrial
61. MCFD2 ENSGALG00000010017 8905 0.865 - - - - - - 0.865 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
62. ERP29 ENSGALG00000023510 47100 0.855 - - - - - - - 0.855 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
63. R3HDM1 ENSGALG00000012246 6580 0.854 - - - - - - 0.854 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
64. TMEM167A ENSGALG00000027332 13862 0.851 - - - - - - 0.851 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
65. SMC4 ENSGALG00000009553 15715 0.85 - - - - - - 0.850 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
66. DCAF7 ENSGALG00000000510 8681 0.849 - - - - - - 0.849 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
67. BMS1 ENSGALG00000002624 8339 0.847 - - - - - - 0.847 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
68. SECISBP2 ENSGALG00000010694 6990 0.846 - - - - - - 0.846 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
69. UCHL3 ENSGALG00000016921 16208 0.846 - - - - - - 0.846 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
70. PRELP ENSGALG00000034456 4354 0.845 - - - - - - - 0.845 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
71. GPR162 ENSGALG00000022926 7181 0.845 - - - - - - 0.845 - - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
72. MED17 ENSGALG00000017218 5821 0.845 - - - - - - 0.845 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
73. DERL1 ENSGALG00000033950 15074 0.844 - - - - - - 0.844 - - - derlin 1 [Source:NCBI gene;Acc:420350]
74. NID2 ENSGALG00000012394 6717 0.844 - - - - - - 0.844 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
75. YOD1 ENSGALG00000037597 2989 0.844 - - - - - - 0.844 - - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
76. ATP6V1C1 ENSGALG00000034099 9898 0.842 - - - - - - - 0.842 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
77. BNIP3L ENSGALG00000043405 10316 0.842 - - - - - - 0.842 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
78. SUCLG2 ENSGALG00000007652 9688 0.84 - - - - - - 0.840 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
79. KXD1 ENSGALG00000036736 3771 0.84 - - - - - - 0.840 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
80. SGSM3 ENSGALG00000012033 1839 0.839 - - - - - - - 0.839 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
81. SF3A2 ENSGALG00000021679 12580 0.839 - - - - - - 0.839 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
82. TPRG1L ENSGALG00000001024 9809 0.837 - - - - - - 0.837 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
83. SRP68 ENSGALG00000002062 7370 0.836 - - - - - - 0.836 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
84. HMGN3 ENSGALG00000015880 30919 0.836 - - - - - - 0.836 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
85. MTFR2 ENSGALG00000019967 4436 0.836 - - - - - - 0.836 - - - mitochondrial fission regulator 2, transcript variant X1
86. SDHD ENSGALG00000007878 25129 0.836 - - - - - - 0.836 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
87. PLA2G12A ENSGALG00000012185 5261 0.836 - - - - - - 0.836 - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
88. GMPPB ENSGALG00000002500 9454 0.834 - - - - - - 0.834 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
89. HOXA4 ENSGALG00000022622 22327 0.834 - - - - - - - 0.834 - - homeobox A4 [Source:NCBI gene;Acc:395307]
90. BTBD1 ENSGALG00000006020 14157 0.834 - - - - - - - 0.834 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
91. SH3BGRL3 ENSGALG00000038536 18187 0.832 - - - - - - 0.832 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
92. PTTG1 17936 0.829 - - - - - - 0.829 - - - pituitary tumor-transforming 1, transcript variant X1
93. NDUFA7 ENSGALG00000000629 14046 0.828 - - - - - - 0.828 - - - NADH:ubiquinone oxidoreductase subunit A7
94. CTNND2 ENSGALG00000013001 11217 0.828 - - - - - - 0.828 - - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
95. INCENP ENSGALG00000007537 16617 0.828 - - - - - - 0.828 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
96. NUP50 ENSGALG00000014222 11743 0.827 - - - - - - 0.827 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
97. DDX28 ENSGALG00000003415 979 0.826 - - - - - - - - 0.826 - DEAD-box helicase 28
98. HRAS1 HRAS1 7988 0.826 - - - - - - - 0.826 - -
99. CMPK CMPK 9569 0.824 - - - - - - 0.824 - - -
100. NCDN ENSGALG00000002408 6180 0.824 - - - - - - 0.824 - - - neurochondrin [Source:NCBI gene;Acc:419633]

There are 657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA