Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RABGGTB

Gene Name Gene ID Reads Annotation
RABGGTB ENSGALG00000011388 11654 Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]











Genes with expression patterns similar to RABGGTB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RABGGTB ENSGALG00000011388 11654 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
2. ENSGALG00000017396 ENSGALG00000017396 9028 1.613 - - - - - 0.704 0.909 - - -
3. TIMM17A ENSGALG00000000086 19205 1.581 - - - - - - 0.782 0.799 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
4. WDR11 ENSGALG00000035013 3393 1.479 - - - - - 0.762 0.717 - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
5. PIK3IP1 ENSGALG00000006942 8388 1.472 - - - - - - 0.750 - 0.722 - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
6. RIOK2 ENSGALG00000015288 6280 0.931 - - - - - - 0.931 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
7. PARP1 ENSGALG00000009228 39433 0.924 - - - - - - 0.924 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
8. DERL1 ENSGALG00000033950 15074 0.922 - - - - - - 0.922 - - - derlin 1 [Source:NCBI gene;Acc:420350]
9. HSPA4 ENSGALG00000040882 20966 0.916 - - - - - - 0.916 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
10. YWHAZ ENSGALG00000031387 84985 0.916 - - - - - - 0.916 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
11. KIF2C ENSGALG00000010120 8999 0.909 - - - - - - 0.909 - - - kinesin family member 2C, transcript variant X1
12. EBNA1BP2 ENSGALG00000009045 17453 0.907 - - - - - - 0.907 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
13. C1H12ORF23 C1H12ORF23 13234 0.906 - - - - - - 0.906 - - -
14. FCF1 ENSGALG00000010275 24928 0.906 - - - - - - 0.906 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
15. BIRC6 ENSGALG00000010541 7999 0.904 - - - - - - 0.904 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
16. AIMP2 ENSGALG00000003400 12655 0.903 - - - - - - 0.903 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
17. RUVBL1 ENSGALG00000005931 9379 0.903 - - - - - - 0.903 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
18. MRPL20 ENSGALG00000001542 28764 0.903 - - - - - - 0.903 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
19. SMC4 ENSGALG00000009553 15715 0.902 - - - - - - 0.902 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
20. HDDC2 ENSGALG00000014841 7674 0.902 - - - - - - 0.902 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
21. HMGB2 ENSGALG00000010745 89235 0.901 - - - - - - 0.901 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
22. NDUFA12 ENSGALG00000011325 19807 0.898 - - - - - - 0.898 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
23. GLO1 ENSGALG00000010127 31662 0.898 - - - - - - 0.898 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
24. ATG3 ENSGALG00000015204 11277 0.895 - - - - - - 0.895 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
25. ERBB2IP ERBB2IP 5800 0.893 - - - - - - 0.893 - - -
26. GOLGA7 ENSGALG00000003483 26525 0.892 - - - - - - 0.892 - - - golgin A7 [Source:NCBI gene;Acc:426787]
27. PREP ENSGALG00000015405 17050 0.891 - - - - - - 0.891 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
28. DGCR2 ENSGALG00000005891 8405 0.891 - - - - - - 0.891 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
29. EIF4A2 ENSGALG00000008684 58507 0.888 - - - - - - 0.888 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
30. CSE1L ENSGALG00000004707 20653 0.888 - - - - - - 0.888 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
31. RRP1B ENSGALG00000035696 12309 0.888 - - - - - - 0.888 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
32. RANBP1 ENSGALG00000002107 17715 0.888 - - - - - - 0.888 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
33. TTC37 ENSGALG00000014670 5715 0.886 - - - - - - 0.886 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
34. SPINZ SPINZ 10341 0.886 - - - - - - 0.886 - - -
35. UBE2V1 ENSGALG00000008015 17947 0.884 - - - - - - 0.884 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
36. EIF2S1 ENSGALG00000009565 63906 0.883 - - - - - - 0.883 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
37. CCNH ENSGALG00000015641 8051 0.883 - - - - - - 0.883 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
38. CTSL2 CTSL2 7966 0.882 - - - - - - 0.882 - - -
39. MAP2K4 ENSGALG00000032178 5982 0.882 - - - - - - 0.882 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
40. GLRX3 ENSGALG00000010464 22578 0.881 - - - - - - 0.881 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
41. UMPS ENSGALG00000011770 11331 0.88 - - - - - - 0.880 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
42. APIP ENSGALG00000031286 6838 0.879 - - - - - - 0.879 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
43. RANGAP1 ENSGALG00000011966 20170 0.879 - - - - - - 0.879 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
44. LSM5 ENSGALG00000041625 22307 0.878 - - - - - - 0.878 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
45. GLI3 ENSGALG00000040266 9981 0.878 - - - - - - 0.878 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
46. AP2A2 ENSGALG00000006799 13874 0.878 - - - - - - 0.878 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
47. CASP3 ENSGALG00000010638 11572 0.877 - - - - - - 0.877 - - - caspase 3 [Source:NCBI gene;Acc:395476]
48. TMEM167A ENSGALG00000027332 13862 0.877 - - - - - - 0.877 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
49. FANCL ENSGALG00000030022 7423 0.876 - - - - - - 0.876 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
50. SKP2 ENSGALG00000003547 14637 0.876 - - - - - - 0.876 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
51. METAP2 ENSGALG00000011377 16311 0.876 - - - - - - 0.876 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
52. OSTC ENSGALG00000010526 19422 0.876 - - - - - - 0.876 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
53. ZNF593 ENSGALG00000000542 79105 0.875 - - - - - - 0.875 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
54. RSL1D1 ENSGALG00000033690 13638 0.875 - - - - - - 0.875 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
55. R3HDM1 ENSGALG00000012246 6580 0.875 - - - - - - 0.875 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
56. SNRNP40 ENSGALG00000000615 32298 0.875 - - - - - - 0.875 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
57. TMEM184C ENSGALG00000010019 7856 0.874 - - - - - - 0.874 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
58. BSG ENSGALG00000001328 37947 0.874 - - - - - - 0.874 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
59. ASUN ASUN 17129 0.874 - - - - - - 0.874 - - -
60. ATP2B1 ENSGALG00000030550 15123 0.873 - - - - - - 0.873 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
61. EGLN1 ENSGALG00000041422 11032 0.873 - - - - - - 0.873 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
62. MED17 ENSGALG00000017218 5821 0.871 - - - - - - 0.871 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
63. RPS28 ENSGALG00000024398 244056 0.87 - - - - - - 0.870 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
64. MARK1 ENSGALG00000009483 10350 0.869 - - - - - - 0.869 - - - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
65. RBM17 ENSGALG00000006332 12656 0.869 - - - - - - 0.869 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
66. PPP1R2 ENSGALG00000029789 11594 0.869 - - - - - - 0.869 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
67. C17H9ORF16 C17H9ORF16 7908 0.868 - - - - - - 0.868 - - -
68. DKC1 ENSGALG00000005054 30350 0.866 - - - - - - 0.866 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
69. RFC1 ENSGALG00000014298 6516 0.865 - - - - - - 0.865 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
70. SIVA1 ENSGALG00000011619 15130 0.863 - - - - - - 0.863 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
71. TOR1AIP1 ENSGALG00000029238 5843 0.863 - - - - - - 0.863 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
72. FYTTD1 ENSGALG00000007581 9341 0.863 - - - - - - 0.863 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
73. NUP50 ENSGALG00000014222 11743 0.862 - - - - - - 0.862 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
74. BRP44 BRP44 17093 0.862 - - - - - - 0.862 - - -
75. TMED7 ENSGALG00000028484 21008 0.862 - - - - - - 0.862 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
76. KDELR2 ENSGALG00000040793 29669 0.862 - - - - - - 0.862 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
77. TMEM70 ENSGALG00000033568 10720 0.862 - - - - - - 0.862 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
78. FAM160B1 ENSGALG00000031404 3153 0.861 - - - - - - 0.861 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
79. KLHDC4 ENSGALG00000037315 9828 0.861 - - - - - - 0.861 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
80. LLPH ENSGALG00000019358 20976 0.861 - - - - - - 0.861 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
81. HARS ENSGALG00000035080 11602 0.861 - - - - - - 0.861 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
82. WDR43 ENSGALG00000032529 12235 0.86 - - - - - - 0.860 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
83. PPCS ENSGALG00000004882 5759 0.86 - - - - - - 0.860 - - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
84. API5 ENSGALG00000037968 18265 0.859 - - - - - - 0.859 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
85. C4orf27 C4orf27 16724 0.859 - - - - - - 0.859 - - -
86. CLNS1A ENSGALG00000008574 25675 0.859 - - - - - - 0.859 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
87. CDC40 ENSGALG00000015061 6118 0.859 - - - - - - 0.859 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
88. SDHD ENSGALG00000007878 25129 0.859 - - - - - - 0.859 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
89. ADD1 ENSGALG00000015664 6828 0.858 - - - - - - 0.858 - - - adducin 1 [Source:NCBI gene;Acc:422882]
90. ACTR2 ENSGALG00000008779 17812 0.858 - - - - - - 0.858 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
91. GRPEL1 ENSGALG00000015549 11246 0.857 - - - - - - 0.857 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
92. KRR1 ENSGALG00000010227 11783 0.857 - - - - - - 0.857 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
93. SNRNP27 ENSGALG00000013883 22212 0.856 - - - - - - 0.856 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
94. C4H4ORF52 C4H4ORF52 8116 0.856 - - - - - - 0.856 - - -
95. GABARAPL2 ENSGALG00000003208 9195 0.856 - - - - - - 0.856 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
96. HCCS ENSGALG00000005571 4939 0.856 - - - - - - 0.856 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
97. TERF2 ENSGALG00000000657 7865 0.856 - - - - - - 0.856 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
98. POLR1E ENSGALG00000005395 8953 0.856 - - - - - - 0.856 - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
99. NDUFV2 ENSGALG00000036625 29234 0.855 - - - - - - 0.855 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
100. SSR3 ENSGALG00000028683 24334 0.855 - - - - - - 0.855 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA