Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB8B

Gene Name Gene ID Reads Annotation
RAB8B ENSGALG00000003487 295 RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]











Genes with expression patterns similar to RAB8B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB8B ENSGALG00000003487 295 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
2. GNAI1 ENSGALG00000008382 195 1.465 - - - - - 0.756 - 0.709 - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
3. GRIA2 ENSGALG00000009405 275 0.957 - - - - - - 0.957 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
4. LAMP1 ENSGALG00000037697 247 0.919 - - - - - - 0.919 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
5. TEX2 ENSGALG00000003496 23 0.916 - - - - - - 0.916 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
6. C18H17ORF67 ENSGALG00000024428 10 0.916 - - - - - - 0.916 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
7. F2 ENSGALG00000008332 298 0.916 - - - - - - 0.916 - - - coagulation factor II, thrombin [Source:NCBI gene;Acc:395306]
8. ANO3 ENSGALG00000013311 16 0.916 - - - - - - 0.916 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
9. DCBLD1 ENSGALG00000014907 19 0.916 - - - - - - 0.916 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
10. ENSGALG00000023475 ENSGALG00000023475 19 0.916 - - - - - - 0.916 - - -
11. MUC5B MUC5B 62 0.916 - - - - - - 0.916 - - -
12. POFUT1 ENSGALG00000006594 367 0.912 - - - - - - 0.912 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
13. KYNU ENSGALG00000012418 353 0.912 - - - - - - 0.912 - - - kynureninase, transcript variant X3
14. NAPRT1 NAPRT1 227 0.911 - - - - - - 0.911 - - -
15. ENDOV 121 0.911 - - - - - - 0.911 - - - endonuclease V
16. APBA2 ENSGALG00000003930 408 0.908 - - - - - - 0.908 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
17. ENSGALG00000014900 ENSGALG00000014900 335 0.907 - - - - - - 0.907 - - -
18. SVOPL ENSGALG00000012812 27 0.905 - - - - - - 0.905 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
19. VTI1B ENSGALG00000009526 133 0.905 - - - - - - 0.905 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
20. TP53I3 ENSGALG00000016502 178 0.903 - - - - - - 0.903 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
21. MOCOS ENSGALG00000013149 25 0.903 - - - - - - 0.903 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
22. NKD1 ENSGALG00000003767 76 0.901 - - - - - - 0.901 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
23. LMCD1 ENSGALG00000008349 928 0.901 - - - - - - 0.901 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
24. ANKS1B ENSGALG00000011549 440 0.9 - - - - - - 0.900 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
25. CCDC40 ENSGALG00000007042 596 0.895 - - - - - - 0.895 - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
26. ENSGALG00000029120 ENSGALG00000029120 73 0.894 - - - - - - 0.894 - - -
27. RIPPLY2 ENSGALG00000015845 34 0.893 - - - - - - 0.893 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
28. C9orf171 C9orf171 35 0.893 - - - - - - 0.893 - - -
29. FGB ENSGALG00000009262 1169 0.893 - - - - - - 0.893 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
30. TSPAN14 ENSGALG00000002414 69 0.891 - - - - - - 0.891 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
31. NCOA6 ENSGALG00000001182 83 0.888 - - - - - - 0.888 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
32. KCTD5 ENSGALG00000006423 192 0.887 - - - - - - 0.887 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
33. TDRD5 ENSGALG00000033634 40 0.884 - - - - - - 0.884 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
34. FAM82B FAM82B 374 0.881 - - - - - - 0.881 - - -
35. PCGF2 ENSGALG00000018815 38 0.879 - - - - - - 0.879 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
36. MAP3K1 ENSGALG00000014718 60 0.879 - - - - - - 0.879 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
37. ATP6V1AL ENSGALG00000000048 21 0.878 - - - - - - 0.878 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
38. YTHDC1 ENSGALG00000035906 471 0.873 - - - - - - 0.873 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
39. KRT222 ENSGALG00000003859 53 0.872 - - - - - - 0.872 - - - keratin 222 [Source:NCBI gene;Acc:420046]
40. NHP2 ENSGALG00000033666 17253 0.871 - - - - - - 0.871 - - - NHP2 ribonucleoprotein [Source:NCBI gene;Acc:416218]
41. MLF1 ENSGALG00000009654 619 0.871 - - - - - - 0.871 - - - myeloid leukemia factor 1, transcript variant X3
42. ARHGAP15 ENSGALG00000012421 58 0.871 - - - - - - 0.871 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
43. KDM5A ENSGALG00000012986 624 0.871 - - - - - - 0.871 - - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
44. ENSGALG00000012463 ENSGALG00000012463 242 0.869 - - - - - - 0.869 - - -
45. TSPAN4 ENSGALG00000006837 150 0.867 - - - - - - 0.867 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
46. ZDHHC5 ENSGALG00000007362 296 0.866 - - - - - - 0.866 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
47. SNORD2 SNORD2 51 0.863 - - - - - - 0.863 - - -
48. FBXL18 ENSGALG00000004611 97 0.863 - - - - - - 0.863 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
49. ENSGALG00000020753 ENSGALG00000020753 159 0.863 - - - - - - 0.863 - - -
50. PYROXD1 ENSGALG00000013173 89 0.861 - - - - - - 0.861 - - - pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
51. CPNE7 ENSGALG00000000507 54 0.861 - - - - - - 0.861 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
52. AGL ENSGALG00000005407 93 0.86 - - - - - - 0.860 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
53. HTR2C ENSGALG00000005853 90 0.86 - - - - - - 0.860 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
54. FAM21A FAM21A 251 0.859 - - - - - - 0.859 - - -
55. PDE4D ENSGALG00000014727 53 0.858 - - - - - - 0.858 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
56. LRRC2 ENSGALG00000013634 69 0.858 - - - - - - 0.858 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
57. LOC770996 ENSGALG00000016570 635 0.854 - - - - - - 0.854 - - - L-gulonolactone oxidase-like
58. HNF4G ENSGALG00000042621 484 0.853 - - - - - - 0.853 - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
59. GUCA2A ENSGALG00000027269 4340 0.851 - - - - - - 0.851 - - - guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
60. ENSGALG00000001515 ENSGALG00000001515 833 0.85 - - - - - - 0.850 - - -
61. LCAT ENSGALG00000028928 484 0.849 - - - - - - 0.849 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
62. RCL1 ENSGALG00000015024 133 0.848 - - - - - - 0.848 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
63. GHDC ENSGALG00000003333 178 0.844 - - - - - - 0.844 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
64. PCP4 ENSGALG00000022819 880 0.843 - - - - - - 0.843 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
65. CPNE1 ENSGALG00000040856 610 0.842 - - - - - - 0.842 - - - copine 1 [Source:NCBI gene;Acc:419134]
66. HOXCDX1L ENSGALG00000007656 53 0.84 - - - - - - 0.840 - - - homeobox protein CDX-1-like
67. PLCXD1 ENSGALG00000016721 289 0.839 - - - - - - 0.839 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
68. RSFR 61 0.838 - - - - - - 0.838 - - - leukocyte ribonuclease A-2
69. ENSGALG00000027399 ENSGALG00000027399 108 0.838 - - - - - - 0.838 - - -
70. LOC100857820 ENSGALG00000001824 16 0.836 - - - - - - 0.836 - - - uncharacterized LOC100857820
71. NSUN5 ENSGALG00000000891 1356 0.836 - - - - - - 0.836 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
72. CADM2 ENSGALG00000043393 810 0.832 - - - - - - 0.832 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
73. ELK4 ENSGALG00000042137 69 0.83 - - - - - - 0.830 - - - ELK4, ETS transcription factor
74. MPLKIP ENSGALG00000031294 65 0.827 - - - - - - - 0.827 - - M-phase specific PLK1 interacting protein [Source:HGNC Symbol;Acc:HGNC:16002]
75. NPTN ENSGALG00000001741 481 0.826 - - - - - - 0.826 - - - neuroplastin [Source:NCBI gene;Acc:415316]
76. IFT27 ENSGALG00000042990 221 0.823 - - - - - - 0.823 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
77. ZNF148 ENSGALG00000012049 365 0.818 - - - - - - 0.818 - - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
78. ENSGALG00000026371 ENSGALG00000026371 106 0.818 - - - - - - 0.818 - - -
79. FAM76B ENSGALG00000017202 688 0.817 - - - - - - 0.817 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
80. ASB13 ENSGALG00000008401 181 0.816 - - - - - - 0.816 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
81. BBS12 142 0.816 - - - - - - 0.816 - - - Bardet-Biedl syndrome 12
82. MKL2 186 0.815 - - - - - - 0.815 - - - MKL1/myocardin like 2, transcript variant X4
83. TRAM2 ENSGALG00000016673 438 0.815 - - - - - - 0.815 - - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
84. PRKCE ENSGALG00000010000 99 0.814 - - - - - - 0.814 - - - protein kinase C epsilon, transcript variant X1
85. TC2N ENSGALG00000010738 92 0.811 - - - - - - 0.811 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
86. HAUS8 ENSGALG00000003727 351 0.811 - - - - - - 0.811 - - - HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
87. ATF3 ENSGALG00000025887 814 0.809 - - - - - - 0.809 - - - activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]
88. WDPCP ENSGALG00000008866 272 0.809 - - - - - - 0.809 - - - WD repeat containing planar cell polarity effector [Source:HGNC Symbol;Acc:HGNC:28027]
89. PHTF2 ENSGALG00000008335 722 0.807 - - - - - - 0.807 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
90. TNFSF11 ENSGALG00000026163 26 0.806 - - - - - - 0.806 - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
91. C11orf63 93 0.806 - - - - - - - 0.806 - - chromosome 11 open reading frame 63, transcript variant X2
92. PRPF39 184 0.804 - - - - - - 0.804 - - - pre-mRNA processing factor 39, transcript variant X7
93. RELN ENSGALG00000008193 43 0.804 - - - - - - 0.804 - - - reelin [Source:NCBI gene;Acc:427850]
94. COL4A2 ENSGALG00000016843 261 0.801 - - - - - - 0.801 - - - collagen type IV alpha 2 chain [Source:NCBI gene;Acc:418752]
95. HRSP12 HRSP12 1165 0.801 - - - - - - 0.801 - - -
96. VSX1 ENSGALG00000037576 1517 0.801 - - - - - - - 0.801 - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
97. PTPRN2 ENSGALG00000030054 947 0.801 - - - - - - 0.801 - - - protein tyrosine phosphatase, receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
98. LRRC42 ENSGALG00000010743 384 0.798 - - - - - - 0.798 - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
99. CATHL1 ENSGALG00000027973 98 0.798 - - - - - 0.798 - - - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
100. MKX ENSGALG00000007426 65 0.797 - - - - - - 0.797 - - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA