Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB7A

Gene Name Gene ID Reads Annotation
RAB7A ENSGALG00000005902 28565 RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9788]











Genes with expression patterns similar to RAB7A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB7A ENSGALG00000005902 28565 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9788]
2. GPI ENSGALG00000004956 40030 1.446 - - - - 0.731 - - 0.715 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
3. SNW1 ENSGALG00000010501 17767 0.994 - - - - - - 0.994 - - - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
4. NR2F1 ENSGALG00000027907 25778 0.984 - - - - - - 0.984 - - - nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
5. ZNF639 ENSGALG00000005944 6387 0.971 - - - - 0.971 - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
6. ZFHX3 ENSGALG00000000713 2340 0.971 - - - - 0.971 - - - - - zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
7. UBE2I ENSGALG00000006428 18421 0.964 - - - - 0.964 - - - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
8. NGFR ENSGALG00000035950 13452 0.955 - - - - 0.955 - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
9. DCTN3 ENSGALG00000021365 22839 0.952 - - - - 0.952 - - - - - dynactin subunit 3 [Source:NCBI gene;Acc:427404]
10. DUT ENSGALG00000038032 34659 0.951 - - - - 0.951 - - - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
11. PSMC6 ENSGALG00000012408 52068 0.947 - - - - 0.947 - - - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
12. MEIS2 ENSGALG00000039118 81591 0.905 - - - - - - 0.905 - - - Meis homeobox 2 [Source:NCBI gene;Acc:395588]
13. CLTA ENSGALG00000015326 26867 0.904 - - - - 0.904 - - - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
14. SYNCRIP ENSGALG00000015830 30555 0.865 - - - - 0.865 - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
15. TAX1BP3 ENSGALG00000004618 35172 0.858 - - - - 0.858 - - - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
16. TRAPPC2L ENSGALG00000006250 21772 0.851 - - - - 0.851 - - - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
17. PARG ENSGALG00000002117 8702 0.844 - - - - - - - 0.844 - - poly(ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:HGNC:8605]
18. MRPL3 ENSGALG00000040873 21053 0.839 - - - - - - - 0.839 - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
19. HTRA3 ENSGALG00000034673 512 0.836 - - - - 0.836 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
20. MED1 ENSGALG00000001708 9556 0.836 - - - - 0.836 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
21. gga-mir-6584 ENSGALG00000028834 1481 0.836 - - - - 0.836 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
22. EPB41L1 ENSGALG00000034171 3616 0.835 - - - - 0.835 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
23. MRPL22 ENSGALG00000003919 2760 0.835 - - - - 0.835 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
24. MYEOV2 MYEOV2 5155 0.834 - - - - 0.834 - - - - -
25. NDST2 ENSGALG00000005107 4224 0.834 - - - - 0.834 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
26. MRPL46 ENSGALG00000006782 5033 0.833 - - - - 0.833 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
27. IBA57 ENSGALG00000005328 4362 0.833 - - - - 0.833 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
28. PPAPDC1B PPAPDC1B 6698 0.833 - - - - 0.833 - - - - -
29. PHKA1 ENSGALG00000004801 2510 0.832 - - - - 0.832 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
30. MAP1B ENSGALG00000014999 6288 0.832 - - - - 0.832 - - - - - microtubule associated protein 1B
31. RNF113A ENSGALG00000000538 3985 0.832 - - - - 0.832 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
32. TBC1D7 ENSGALG00000012731 4891 0.831 - - - - 0.831 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
33. WHSC1L1 4065 0.831 - - - - 0.831 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
34. RAE1 ENSGALG00000007653 8930 0.831 - - - - 0.831 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
35. OPTC ENSGALG00000003554 3698 0.831 - - - - 0.831 - - - - - opticin [Source:NCBI gene;Acc:395130]
36. ABCC1 ENSGALG00000006646 2596 0.83 - - - - 0.830 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
37. HYOU1 ENSGALG00000007659 3555 0.83 - - - - 0.830 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
38. PKM ENSGALG00000001992 93960 0.829 - - - - 0.829 - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
39. MRPS11 ENSGALG00000006777 16009 0.829 - - - - 0.829 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
40. C15H12ORF49 C15H12ORF49 13250 0.829 - - - - 0.829 - - - - -
41. TMEM39B ENSGALG00000003287 4125 0.829 - - - - 0.829 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
42. BCL9 ENSGALG00000037655 4620 0.829 - - - - 0.829 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
43. TNPO3 ENSGALG00000039420 5178 0.829 - - - - 0.829 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
44. SEC61A2 ENSGALG00000036300 4235 0.828 - - - - 0.828 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
45. CCDC59 ENSGALG00000028648 9272 0.828 - - - - 0.828 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
46. AGPAT3 ENSGALG00000031932 6903 0.827 - - - - 0.827 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
47. TBRG4 ENSGALG00000038102 9269 0.827 - - - - 0.827 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
48. NOL6 ENSGALG00000030730 7191 0.827 - - - - 0.827 - - - - - nucleolar protein 6
49. HMGB3 ENSGALG00000009071 12011 0.827 - - - - 0.827 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
50. VPS8 ENSGALG00000006704 5419 0.826 - - - - 0.826 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
51. LSM5 ENSGALG00000041625 22307 0.826 - - - - 0.826 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
52. KCTD9 ENSGALG00000000275 3455 0.826 - - - - 0.826 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
53. DNAJC2 ENSGALG00000008249 28064 0.825 - - - - 0.825 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
54. NSG1 ENSGALG00000015010 5829 0.825 - - - - 0.825 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
55. RILPL2 ENSGALG00000003321 5632 0.824 - - - - 0.824 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
56. USP1 ENSGALG00000010957 8297 0.824 - - - - 0.824 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
57. THBS1 ENSGALG00000009626 3521 0.823 - - - - 0.823 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
58. CENPE ENSGALG00000013208 12337 0.822 - - - - 0.822 - - - - - centromere protein E, transcript variant X4
59. SPG21 ENSGALG00000007262 8050 0.822 - - - - 0.822 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
60. SAMM50 ENSGALG00000014194 20437 0.821 - - - - 0.821 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
61. TMEM18 ENSGALG00000028744 11779 0.821 - - - - 0.821 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
62. RAB21 ENSGALG00000010183 7718 0.82 - - - - 0.820 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
63. UQCRC2 ENSGALG00000002490 23477 0.82 - - - - 0.820 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
64. TRIM33 ENSGALG00000001976 7404 0.82 - - - - 0.820 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
65. PGAM5 ENSGALG00000002137 7700 0.82 - - - - 0.820 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
66. TM2D2 ENSGALG00000003356 7088 0.82 - - - - 0.820 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
67. M6PR ENSGALG00000031681 9442 0.819 - - - - 0.819 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
68. HOXB3 ENSGALG00000043219 5198 0.819 - - - - 0.819 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
69. OAF ENSGALG00000006715 12518 0.816 - - - - 0.816 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
70. ESRP2 ENSGALG00000003374 4436 0.816 - - - - 0.816 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
71. UBE2G2 ENSGALG00000005667 12689 0.814 - - - - 0.814 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
72. MORN4 ENSGALG00000006149 7772 0.813 - - - - 0.813 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
73. C4orf27 C4orf27 16724 0.813 - - - - 0.813 - - - - -
74. LUC7L2 ENSGALG00000036238 11817 0.812 - - - - 0.812 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
75. MCM4 ENSGALG00000012915 13151 0.811 - - - - 0.811 - - - - - minichromosome maintenance complex component 4
76. ETF1 ENSGALG00000002262 14560 0.811 - - - - 0.811 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
77. TCF7L2 ENSGALG00000008883 13688 0.809 - - - - 0.809 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
78. NUP37 ENSGALG00000012759 9985 0.809 - - - - 0.809 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
79. FAM98A ENSGALG00000010428 9585 0.808 - - - - 0.808 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
80. CWC22 ENSGALG00000009001 5984 0.806 - - - - 0.806 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
81. RPS6 ENSGALG00000015082 307412 0.805 - - - - 0.805 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
82. RALB ENSGALG00000026493 14590 0.805 - - - - 0.805 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
83. INCENP ENSGALG00000007537 16617 0.804 - - - - 0.804 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
84. SEC63 ENSGALG00000015308 11596 0.802 - - - - 0.802 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
85. RBM26 ENSGALG00000016910 13769 0.801 - - - - 0.801 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
86. ZEB1 ENSGALG00000007260 9277 0.801 - - - - 0.801 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
87. CREPT CREPT 17142 0.8 - - - - 0.800 - - - - -
88. PUF60 ENSGALG00000039901 26902 0.798 - - - - 0.798 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
89. PSMD14 ENSGALG00000011128 13335 0.794 - - - - 0.794 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
90. CDC5L ENSGALG00000016704 22893 0.791 - - - - 0.791 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
91. BRP44L BRP44L 30452 0.79 - - - - 0.790 - - - - -
92. ABCF2 ENSGALG00000034573 15639 0.789 - - - - 0.789 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
93. ENSGALG00000026041 ENSGALG00000026041 13390 0.787 - - - - 0.787 - - - - -
94. MTF2 ENSGALG00000043087 15225 0.786 - - - - 0.786 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
95. EIF3L ENSGALG00000012296 42627 0.78 - - - - 0.780 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
96. SMC3 ENSGALG00000008585 16618 0.774 - - - - 0.774 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
97. EPFIP1L ENSGALG00000007683 18050 0.772 - - - - 0.772 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
98. PAX-7 PAX-7 3856 0.772 - - - - 0.772 - - - - -
99. SMNDC1 ENSGALG00000008561 14415 0.771 - - - - 0.771 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
100. ENSGALG00000000360 ENSGALG00000000360 15320 0.766 - - - - 0.766 - - - - -

There are 55 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA