Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB6A

Gene Name Gene ID Reads Annotation
RAB6A ENSGALG00000017320 10569 RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]











Genes with expression patterns similar to RAB6A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB6A ENSGALG00000017320 10569 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
2. ACAP2 ENSGALG00000007040 4182 1.722 - - - - - - 0.774 0.948 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
3. ADD1 ENSGALG00000015664 6828 1.66 - - - - - - 0.707 0.953 - - adducin 1 [Source:NCBI gene;Acc:422882]
4. IGF2BP2 ENSGALG00000033195 11421 1.624 - - - - - - 0.731 0.893 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
5. NFI1 NFI1 6210 0.983 - - - - - - - 0.983 - -
6. VAPB ENSGALG00000007549 15511 0.979 - - - - - - - 0.979 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
7. FKBP15 ENSGALG00000008838 3677 0.979 - - - - - - - 0.979 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
8. HDHD2 ENSGALG00000034801 6373 0.978 - - - - - - - 0.978 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
9. LGALS1 ENSGALG00000012420 13993 0.977 - - - - - - - 0.977 - - galectin 1 [Source:NCBI gene;Acc:396491]
10. CHN1 ENSGALG00000009293 6415 0.974 - - - - - - - 0.974 - - chimerin 1 [Source:NCBI gene;Acc:429021]
11. RNF10 ENSGALG00000036417 8027 0.971 - - - - - - - 0.971 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
12. MRPL48 ENSGALG00000017319 9773 0.971 - - - - - - - 0.971 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
13. EPS15 ENSGALG00000010543 1598 0.959 - - - - - - - 0.959 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
14. PTPN11 ENSGALG00000004821 2658 0.957 - - - - - - - 0.957 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
15. IPO9 ENSGALG00000000397 9263 0.956 - - - - - - - 0.956 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
16. KDM4B ENSGALG00000034592 6711 0.955 - - - - - - - 0.955 - - lysine demethylase 4B, transcript variant X8
17. PACSIN3 ENSGALG00000008231 5423 0.955 - - - - - - - 0.955 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
18. ADARB1 ENSGALG00000007527 2480 0.955 - - - - - - - 0.955 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
19. ANKRD17 ENSGALG00000011642 3192 0.954 - - - - - - - 0.954 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
20. gga-mir-1787 ENSGALG00000025542 1373 0.953 - - - - - - - 0.953 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
21. FGFRL1 ENSGALG00000037525 1687 0.952 - - - - - - - 0.952 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
22. RBM6 ENSGALG00000035578 1690 0.952 - - - - - - - 0.952 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
23. H2AFY_1 ENSGALG00000040141 4895 0.952 - - - - - - - 0.952 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
24. MB21D1 2460 0.952 - - - - - - - 0.952 - - Mab-21 domain containing 1
25. DENND5B 4077 0.951 - - - - - - - 0.951 - - DENN domain containing 5B, transcript variant X1
26. KIAA1432 KIAA1432 1792 0.951 - - - - - - - 0.951 - -
27. NAA50 ENSGALG00000033889 3551 0.951 - - - - - - - 0.951 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
28. PGS1 ENSGALG00000007181 3187 0.95 - - - - - - - 0.950 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
29. MTRF1 ENSGALG00000016951 3983 0.95 - - - - - - - 0.950 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
30. PPT1 ENSGALG00000003936 2540 0.95 - - - - - - - 0.950 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
31. KCTD9 ENSGALG00000000275 3455 0.95 - - - - - - - 0.950 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
32. VPS13B 2293 0.95 - - - - - - - 0.950 - - vacuolar protein sorting 13 homolog B
33. TECPR2 ENSGALG00000011373 1063 0.949 - - - - - - - 0.949 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
34. NFASC ENSGALG00000031776 4264 0.949 - - - - - - - 0.949 - - neurofascin [Source:NCBI gene;Acc:419824]
35. TMEM100 ENSGALG00000026465 1785 0.949 - - - - - - - 0.949 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
36. LIN7C ENSGALG00000012170 5043 0.948 - - - - - - - 0.948 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
37. ZMYM4 ENSGALG00000002499 435 0.948 - - - - - - - 0.948 - - zinc finger MYM-type containing 4, transcript variant X1
38. PAX-6 PAX-6 2650 0.948 - - - - - - - 0.948 - -
39. DOCK8 481 0.948 - - - - - - - 0.948 - - dedicator of cytokinesis 8, transcript variant X1
40. FBXW8 ENSGALG00000008207 1639 0.948 - - - - - - - 0.948 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
41. ENSGALG00000026930 ENSGALG00000026930 681 0.948 - - - - - - - 0.948 - -
42. CMC1 ENSGALG00000025811 3939 0.947 - - - - - - - 0.947 - - C-X9-C motif containing 1
43. SNCAIP ENSGALG00000005330 2425 0.947 - - - - - - - 0.947 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
44. OMA1 ENSGALG00000010861 3328 0.946 - - - - - - - 0.946 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
45. RPAP1 ENSGALG00000008624 3522 0.946 - - - - - - - 0.946 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
46. QARS ENSGALG00000029980 4207 0.946 - - - - - - - 0.946 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
47. RHOT1 ENSGALG00000003397 5149 0.944 - - - - - - - 0.944 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
48. EED ENSGALG00000014060 6467 0.944 - - - - - - - 0.944 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
49. MAK16 ENSGALG00000001663 7455 0.943 - - - - - - - 0.943 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
50. RIOK1 ENSGALG00000012795 4658 0.943 - - - - - - - 0.943 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
51. PRORSD1P ENSGALG00000034854 2924 0.943 - - - - - - - 0.943 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
52. FAS ENSGALG00000006351 461 0.943 - - - - - - - 0.943 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
53. DDHD1 ENSGALG00000012426 6068 0.942 - - - - - - - 0.942 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
54. KNOP1 ENSGALG00000002042 6251 0.941 - - - - - - - 0.941 - - lysine-rich nucleolar protein 1, transcript variant X1
55. C3H2ORF43 C3H2ORF43 5628 0.938 - - - - - - - 0.938 - -
56. VRK1 ENSGALG00000011116 4524 0.936 - - - - - - - 0.936 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
57. MED10 ENSGALG00000028336 9343 0.928 - - - - - - - 0.928 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
58. SNAPC5 ENSGALG00000007695 4117 0.925 - - - - - - - 0.925 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
59. LMNB2 ENSGALG00000000470 4364 0.923 - - - - - - - 0.923 - - lamin B2 [Source:NCBI gene;Acc:396222]
60. ATP8B1 ENSGALG00000030834 521 0.923 - - - - - - - 0.923 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
61. FAM192A ENSGALG00000021473 10213 0.921 - - - - - - - 0.921 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
62. UFD1L 12964 0.918 - - - - - - - 0.918 - - ubiquitin fusion degradation 1 like (yeast)
63. ERLIN1 ENSGALG00000003308 6427 0.912 - - - - - - - 0.912 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
64. KXD1 ENSGALG00000036736 3771 0.912 - - - - - - - 0.912 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
65. ACADSB ENSGALG00000041417 7710 0.912 - - - - - - - 0.912 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
66. APIP ENSGALG00000031286 6838 0.905 - - - - - - - 0.905 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
67. RBP5 ENSGALG00000014662 31268 0.9 - - - - - - - 0.900 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
68. WBP11 ENSGALG00000011745 11182 0.896 - - - - - - - 0.896 - - WW domain binding protein 11, transcript variant X1
69. STT3B ENSGALG00000011465 11939 0.892 - - - - - - - 0.892 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
70. TTYH2 ENSGALG00000026940 15628 0.889 - - - - - - - 0.889 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
71. TAX1BP1 ENSGALG00000042822 7728 0.869 - - - - - - - 0.869 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
72. TPRG1L ENSGALG00000001024 9809 0.867 - - - - - - - 0.867 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
73. TSSC4 ENSGALG00000006530 10413 0.866 - - - - - - - 0.866 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
74. ZNF276 ENSGALG00000000513 2410 0.852 - - - - - - - 0.852 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
75. SOX11 ENSGALG00000016397 12144 0.847 - - - - - - 0.847 - - - SRY-box 11 [Source:NCBI gene;Acc:396104]
76. SLC25A20 ENSGALG00000028227 7685 0.847 - - - - - - - 0.847 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
77. WASL ENSGALG00000008797 5729 0.84 - - - - - - - 0.840 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
78. LOC407092 ENSGALG00000013809 10706 0.835 - - - - - - - 0.835 - - AD012Z, transcript variant X5
79. LOC422426 ENSGALG00000009622 1470 0.832 - - - - - - - 0.832 - - uncharacterized LOC422426, transcript variant X2
80. NEK6 ENSGALG00000001118 20333 0.816 - - - - - - 0.816 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
81. RBBP6 ENSGALG00000006043 9708 0.814 - - - - - - - 0.814 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
82. TARDBP ENSGALG00000002906 24748 0.814 - - - - - - 0.814 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
83. EP300 ENSGALG00000011992 12490 0.813 - - - - - - 0.813 - - - E1A binding protein p300 [Source:HGNC Symbol;Acc:HGNC:3373]
84. METAP2 ENSGALG00000011377 16311 0.81 - - - - - - 0.810 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
85. DENR ENSGALG00000003795 30805 0.802 - - - - - - - 0.802 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
86. ITGB5 ENSGALG00000029766 5978 0.802 - - - - - - - 0.802 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
87. TMEM18 ENSGALG00000028744 11779 0.802 - - - - - - - 0.802 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
88. TFAM ENSGALG00000002703 19330 0.8 - - - - - - - 0.800 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
89. TOP3B ENSGALG00000030051 5953 0.795 - - - - - - - 0.795 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
90. GATD3A ENSGALG00000016918 24760 0.795 - - - - - - - 0.795 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
91. MESDC1 1013 0.794 - - - - - - - 0.794 - - mesoderm development candidate 1
92. PACS1 ENSGALG00000008567 1423 0.792 - - - - - - 0.792 - - - phosphofurin acidic cluster sorting protein 1, transcript variant X3
93. MTCH2 ENSGALG00000036196 15097 0.788 - - - - - - - 0.788 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
94. CRMP1B CRMP1B 18633 0.788 - - - - - - - 0.788 - -
95. CPSF2 ENSGALG00000010783 5236 0.786 - - - - - - - 0.786 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
96. UBE2D3 ENSGALG00000012311 39831 0.785 - - - - - - - 0.785 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
97. ANKRD10 ENSGALG00000030125 3611 0.784 - - - - - - 0.784 - - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
98. PPP1R2 ENSGALG00000029789 11594 0.782 - - - - - - 0.782 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
99. MBD3 ENSGALG00000001101 37265 0.777 - - - - - - 0.777 - - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
100. CARS ENSGALG00000006427 7660 0.776 - - - - - - 0.776 - - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]

There are 149 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA