Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB5C

Gene Name Gene ID Reads Annotation
RAB5C ENSGALG00000003359 5597 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]











Genes with expression patterns similar to RAB5C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB5C ENSGALG00000003359 5597 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
2. MRPL50 ENSGALG00000015543 11649 2.323 - - - - - - 0.774 0.743 - 0.806 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
3. CHRAC1 ENSGALG00000040823 5695 2.166 - - - - - - 0.704 0.717 - 0.745 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
4. ECI2 ENSGALG00000012809 3692 1.627 - - - - - - 0.836 - - 0.791 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
5. SPDL1 ENSGALG00000001942 4403 1.597 - - - - - - - 0.742 - 0.855 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
6. GSTAL2 ENSGALG00000028551 4899 1.593 - - - - - - 0.728 - - 0.865 glutathione S-transferase alpha-like 2, transcript variant X4
7. PCNP ENSGALG00000015330 15750 1.593 - - - - - - 0.727 - - 0.866 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
8. STRADA ENSGALG00000000550 6912 1.584 - - - - - - - 0.719 - 0.865 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
9. DAP3 ENSGALG00000019796 13278 1.574 - - - - - - 0.754 - - 0.820 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
10. GPR162 ENSGALG00000022926 7181 1.57 - - - - - - - 0.778 - 0.792 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
11. AGPS ENSGALG00000009236 2250 1.554 - - - - - - - 0.708 - 0.846 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
12. DNM1L ENSGALG00000012929 6174 1.552 - - - - - - 0.800 0.752 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
13. UPF2 ENSGALG00000033772 9548 1.55 - - - - - - 0.746 - - 0.804 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
14. FBXO21 ENSGALG00000008201 2608 1.544 - - - - - - - 0.723 - 0.821 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
15. FAM18B1 ENSGALG00000001335 5177 1.544 - - - - - - 0.716 0.828 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
16. SSR2 ENSGALG00000000764 32190 1.542 - - - - - - - 0.708 - 0.834 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
17. HSPA4 ENSGALG00000040882 20966 1.541 - - - - - - 0.800 - - 0.741 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
18. SMC4 ENSGALG00000009553 15715 1.539 - - - - - - 0.751 - - 0.788 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
19. R3HDM1 ENSGALG00000012246 6580 1.533 - - - - - - 0.758 0.775 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
20. MRPL2 ENSGALG00000008597 16500 1.53 - - - - - - 0.726 0.804 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
21. TMX3 ENSGALG00000013757 6387 1.528 - - - - - - 0.725 - - 0.803 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
22. GGA.31975 GGA.31975 8825 1.528 - - - - - - 0.741 - - 0.787
23. MPRIP ENSGALG00000004798 6700 1.527 - - - - - - - 0.703 - 0.824 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
24. COMMD7 ENSGALG00000006630 11491 1.526 - - - - - - 0.719 - - 0.807 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
25. FNBP1L ENSGALG00000005850 9219 1.525 - - - - - - 0.707 - - 0.818 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
26. DTWD2 ENSGALG00000002250 1604 1.523 - - - - - - 0.714 - - 0.809 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
27. SWIP-1 SWIP-1 6024 1.519 - - - - - - 0.735 0.784 - -
28. QSER1 ENSGALG00000012030 4490 1.518 - - - - - - - 0.709 - 0.809 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
29. GCSH ENSGALG00000032679 29231 1.517 - - - - - - - 0.757 - 0.760 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
30. ATG16L1 ENSGALG00000001619 3562 1.517 - - - - - - - 0.758 - 0.759 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
31. SRF ENSGALG00000032029 6983 1.514 - - - - - - 0.701 - - 0.813 serum response factor [Source:NCBI gene;Acc:396103]
32. TIMM8A ENSGALG00000004963 14263 1.511 - - - - - - 0.764 0.747 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
33. FAM177A1 ENSGALG00000010046 4318 1.51 - - - - - - 0.731 0.779 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
34. DCPS ENSGALG00000031143 10191 1.505 - - - - - - 0.703 0.802 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
35. C11H16ORF80 C11H16ORF80 18673 1.504 - - - - - - 0.747 0.757 - -
36. WASF1 ENSGALG00000015066 5628 1.491 - - - - - - 0.783 - - 0.708 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
37. RPL22 ENSGALG00000000719 74238 1.485 - - - - - - - 0.735 - 0.750 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
38. URM1 ENSGALG00000004971 17880 1.481 - - - - - - - 0.775 - 0.706 ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
39. ZRANB1 ENSGALG00000031474 3909 1.48 - - - - - - 0.703 - - 0.777 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
40. GXYLT1 ENSGALG00000009532 5682 1.48 - - - - - - 0.708 - - 0.772 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
41. NAA30 ENSGALG00000012098 4681 1.476 - - - - - - 0.722 - - 0.754 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
42. CHMP5 ENSGALG00000013160 13347 1.474 - - - - - - 0.725 - - 0.749 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
43. ODF2 ENSGALG00000004767 3972 1.472 - - - - - - 0.720 - - 0.752 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
44. INCENP ENSGALG00000007537 16617 1.47 - - - - - - 0.757 0.713 - - inner centromere protein [Source:NCBI gene;Acc:396270]
45. TMED7 ENSGALG00000028484 21008 1.47 - - - - - - 0.702 - - 0.768 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
46. NDUFA12 ENSGALG00000011325 19807 1.469 - - - - - - 0.748 0.721 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
47. EVL ENSGALG00000011209 5440 1.457 - - - - - - 0.717 0.740 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
48. NUBP1 ENSGALG00000007241 3791 1.448 - - - - - - - 0.716 - 0.732 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
49. RIN2 ENSGALG00000008457 2661 1.447 - - - - - - 0.721 0.726 - - Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
50. GNAI2 ENSGALG00000035645 9535 1.446 - - - - - - 0.723 0.723 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
51. SP3 ENSGALG00000031796 8997 1.431 - - - - - - 0.724 - - 0.707 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
52. ALDH3A2 ENSGALG00000004763 3363 1.421 - - - - - - 0.706 0.715 - - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
53. CAPN15 ENSGALG00000002018 3353 1.412 - - - - - - 0.701 0.711 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
54. MYOCD ENSGALG00000001021 351 0.908 - - - - - - - - - 0.908 myocardin [Source:NCBI gene;Acc:427790]
55. HDHD1 HDHD1 2928 0.899 - - - - - - - - - 0.899
56. MPP5 ENSGALG00000009581 724 0.898 - - - - - - - - - 0.898 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
57. COG6 ENSGALG00000017035 2777 0.897 - - - - - - - - - 0.897 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
58. PRR14L ENSGALG00000028473 439 0.894 - - - - - - - - - 0.894 proline rich 14-like, transcript variant X5
59. KCNMA1 ENSGALG00000004980 261 0.893 - - - - - - - - - 0.893 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
60. MB21D1 2460 0.892 - - - - - - - - - 0.892 Mab-21 domain containing 1
61. ZNF395 ENSGALG00000034140 1868 0.878 - - - - - - - - - 0.878 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
62. SRSF1 ENSGALG00000005525 4376 0.878 - - - - - - - 0.878 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
63. NARS ENSGALG00000040506 9506 0.876 - - - - - - - - - 0.876 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
64. 5 5 4209 0.875 - - - - - - - - - 0.875
65. MAN2A1 ENSGALG00000000255 4543 0.874 - - - - - - - - - 0.874 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
66. TMEM128 ENSGALG00000014992 6567 0.874 - - - - - - - - - 0.874 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
67. FANCL ENSGALG00000030022 7423 0.873 - - - - - - - - - 0.873 FA complementation group L [Source:NCBI gene;Acc:421202]
68. NCAPG2 ENSGALG00000006525 2319 0.873 - - - - - - - - - 0.873 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
69. C14orf80 C14orf80 1921 0.873 - - - - - - - - - 0.873
70. ANXA6 ENSGALG00000004357 2891 0.873 - - - - - - - - - 0.873 annexin A6 [Source:NCBI gene;Acc:395481]
71. AGGF1 ENSGALG00000004311 3011 0.872 - - - - - - - - - 0.872 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
72. TANGO2 ENSGALG00000002056 1971 0.872 - - - - - - - - - 0.872 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
73. LAMP2 ENSGALG00000008572 198 0.871 - - - - - - - - - 0.871 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
74. CCNA2 ENSGALG00000011881 2574 0.871 - - - - - - - - - 0.871 cyclin A2 [Source:NCBI gene;Acc:396172]
75. SMDT1 ENSGALG00000011897 9360 0.87 - - - - - - - - - 0.870 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
76. AFG3L2 ENSGALG00000013853 1138 0.87 - - - - - - - - - 0.870 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
77. C26H6ORF89 C26H6ORF89 1826 0.869 - - - - - - - - - 0.869
78. SYNCRIP ENSGALG00000015830 30555 0.868 - - - - - - - - - 0.868 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
79. TRPC4AP ENSGALG00000003147 3967 0.867 - - - - - - - - - 0.867 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
80. HOTAIRM1 HOTAIRM1 4335 0.866 - - - - - - - - - 0.866
81. RAD50 ENSGALG00000006794 4308 0.866 - - - - - - - - - 0.866 RAD50 double strand break repair protein, transcript variant X4
82. PROM1 ENSGALG00000014496 2494 0.865 - - - - - - - - - 0.865 prominin 1 [Source:NCBI gene;Acc:422825]
83. SVIL ENSGALG00000007331 12032 0.865 - - - - - - - - - 0.865 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
84. ODZ3 ODZ3 2213 0.864 - - - - - - - - - 0.864
85. MTSS1 ENSGALG00000041969 1312 0.863 - - - - - - - - - 0.863 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
86. MTERFD1 MTERFD1 3640 0.863 - - - - - - - - - 0.863
87. RBM5 30998 0.863 - - - - - - - - - 0.863 RNA binding motif protein 5, transcript variant X1
88. CPSF2 ENSGALG00000010783 5236 0.862 - - - - - - - - - 0.862 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
89. PGD ENSGALG00000002797 15115 0.861 - - - - - - - - - 0.861 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
90. CAMSAP2 ENSGALG00000002145 6109 0.859 - - - - - - - - - 0.859 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
91. CP ENSGALG00000030773 119 0.858 - - - - - - - - - 0.858 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
92. PREX2 ENSGALG00000042354 134 0.858 - - - - - - - - - 0.858 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
93. APBA3 ENSGALG00000000740 1249 0.857 - - - - - - - - - 0.857 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
94. TP53BP1 ENSGALG00000042201 708 0.856 - - - - - - - - - 0.856 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
95. TIAR TIAR 2471 0.856 - - - - - - - - - 0.856
96. SNRNP48 ENSGALG00000013005 1468 0.856 - - - - - - - - - 0.856 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
97. ENSGALG00000014171 ENSGALG00000014171 10383 0.855 - - - - - - - - - 0.855
98. ERI1 ENSGALG00000011448 3236 0.854 - - - - - - - - - 0.854 exoribonuclease 1 [Source:NCBI gene;Acc:422629]
99. COBRA1 COBRA1 4600 0.854 - - - - - - - 0.854 - -
100. UFSP2 ENSGALG00000010601 5809 0.854 - - - - - - - - - 0.854 UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]

There are 792 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA