Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB5A

Gene Name Gene ID Reads Annotation
RAB5A ENSGALG00000011272 17767 RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]











Genes with expression patterns similar to RAB5A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB5A ENSGALG00000011272 17767 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]
2. RBM25 ENSGALG00000009332 10842 1.618 - - 0.710 - - - 0.908 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
3. ZNF335 ENSGALG00000041370 4740 1.581 - - 0.713 - - - 0.868 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
4. FAM168B ENSGALG00000002172 12162 1.479 - - 0.708 - - - 0.771 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
5. PLOD1 ENSGALG00000004531 8256 0.953 - - - - - - 0.953 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
6. MPHOSPH10 ENSGALG00000003906 7029 0.953 - - - - - - 0.953 - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
7. ASB3 ENSGALG00000008176 5422 0.949 - - - - - - 0.949 - - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
8. AIMP1 ENSGALG00000010553 17994 0.947 - - - - - - 0.947 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
9. CHCHD4 ENSGALG00000006328 5860 0.943 - - - - - - 0.943 - - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
10. ODC1 ENSGALG00000016444 20119 0.943 - - - - - - 0.943 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
11. RNF130 ENSGALG00000005820 13797 0.942 - - - - - - 0.942 - - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
12. IST1 ENSGALG00000000811 10527 0.941 - - - - - - 0.941 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
13. PAFAH1B1 ENSGALG00000005834 23532 0.939 - - - - - - 0.939 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
14. NCBP2_1 ENSGALG00000006843 7170 0.935 - - - - - - 0.935 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
15. SKIV2L2 ENSGALG00000014709 2926 0.933 - - - - - - 0.933 - - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
16. ADD3 ENSGALG00000008542 13814 0.93 - - - - - - 0.930 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
17. TRIP11 ENSGALG00000010763 3146 0.921 - - - - - - 0.921 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
18. MKI67 ENSGALG00000025996 28136 0.914 - - - - - - 0.914 - - - marker of proliferation Ki-67, transcript variant X3
19. WDR36 ENSGALG00000000247 11277 0.91 - - - - - - 0.910 - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
20. NECAP2 ENSGALG00000003745 4899 0.906 - - - - - - 0.906 - - - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
21. SLC4A3 ENSGALG00000011224 2161 0.905 - - - - - - 0.905 - - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
22. IAH1 ENSGALG00000016425 11163 0.905 - - - - - - 0.905 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:NCBI gene;Acc:421930]
23. FUBP3 ENSGALG00000003941 12667 0.897 - - - - - - 0.897 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
24. PDCD11 ENSGALG00000008265 8665 0.896 - - - - - - 0.896 - - - programmed cell death 11, transcript variant X2
25. STOML2 STOML2 15566 0.895 - - - - - - 0.895 - - -
26. IPO11 ENSGALG00000014740 4922 0.894 - - - - - - 0.894 - - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
27. MRPS6 ENSGALG00000027579 8225 0.894 - - - - - - 0.894 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
28. LAMTOR2 ENSGALG00000029881 35356 0.893 - - - - - - 0.893 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
29. ZRANB2 ENSGALG00000011340 18994 0.893 - - - - - - 0.893 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
30. CHCHD10 ENSGALG00000028810 10389 0.893 - - - - - - 0.893 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
31. ACTL6A ENSGALG00000009061 13013 0.892 - - - - - - 0.892 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
32. LGR5 ENSGALG00000010163 2931 0.892 - - - - - - 0.892 - - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
33. C2orf47 C2orf47 17769 0.89 - - - - - - 0.890 - - -
34. MNAT1 ENSGALG00000011910 6809 0.889 - - - - - - 0.889 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
35. FNDC3AL ENSGALG00000004169 4980 0.888 - - - - - - 0.888 - - - fibronectin type III domain containing 3A-like, transcript variant X3
36. ACOT7 ENSGALG00000000652 7976 0.886 - - - - - - 0.886 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
37. BDH1_1 ENSGALG00000023601 6109 0.886 - - - - - - 0.886 - - - 3-hydroxybutyrate dehydrogenase, type 1
38. BOD1L1 ENSGALG00000026470 9250 0.886 - - - - - - 0.886 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
39. DESI2 ENSGALG00000010678 4590 0.886 - - - - - - 0.886 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
40. MRPL18 ENSGALG00000011625 7855 0.886 - - - - - - 0.886 - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
41. C1H21ORF91 ENSGALG00000028290 5550 0.886 - - - - - - 0.886 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
42. LRIG2 ENSGALG00000001733 2980 0.885 - - - - - - 0.885 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
43. NDUFS3 ENSGALG00000008084 12471 0.885 - - - - - - 0.885 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
44. UTP18 ENSGALG00000002985 7129 0.884 - - - - - - 0.884 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
45. PEX3 ENSGALG00000013777 3158 0.884 - - - - - - 0.884 - - - peroxisomal biogenesis factor 3
46. CWC22 ENSGALG00000009001 5984 0.884 - - - - - - 0.884 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
47. MND1 ENSGALG00000009212 11765 0.884 - - - - - - 0.884 - - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
48. ATP6V1D ENSGALG00000009570 9827 0.88 - - - - - - 0.880 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
49. SLC35B1 ENSGALG00000035057 10683 0.88 - - - - - - 0.880 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
50. DPY30 ENSGALG00000010621 6818 0.879 - - - - - - 0.879 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
51. CWF19L2 ENSGALG00000017171 4590 0.879 - - - - - - 0.879 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
52. CKLF ENSGALG00000005254 3365 0.878 - - - - - - 0.878 - - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
53. CDK5RAP2 ENSGALG00000041102 4042 0.878 - - - - - - 0.878 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
54. TCF7L2 ENSGALG00000008883 13688 0.877 - - - - - - 0.877 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
55. MRTO4 ENSGALG00000003991 13642 0.877 - - - - - - 0.877 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
56. GPATCH1 ENSGALG00000004839 6455 0.876 - - - - - - 0.876 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
57. SUCO ENSGALG00000003081 4116 0.876 - - - - - - 0.876 - - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
58. SFXN4 ENSGALG00000009350 3899 0.876 - - - - - - 0.876 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
59. PPA1 ENSGALG00000004442 33355 0.873 - - - - - - 0.873 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
60. INPP5A ENSGALG00000010493 6769 0.873 - - - - - - 0.873 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
61. PAXBP1 ENSGALG00000036833 5573 0.872 - - - - - - 0.872 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
62. FNTA ENSGALG00000015397 3741 0.872 - - - - - - 0.872 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
63. DLC1 ENSGALG00000013715 5297 0.872 - - - - - - 0.872 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
64. XPC ENSGALG00000006357 2484 0.871 - - - - - - 0.871 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
65. WBP4 ENSGALG00000016949 5858 0.871 - - - - - - 0.871 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
66. IFITM3 ENSGALG00000026970 4738 0.871 - - - - - - 0.871 - - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
67. PARP16 ENSGALG00000007365 9467 0.87 - - - - - - 0.870 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
68. SKA3 ENSGALG00000017128 4176 0.87 - - - - - - 0.870 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
69. PEO1 PEO1 6747 0.869 - - - - - - 0.869 - - -
70. JUP ENSGALG00000017414 6920 0.868 - - - - - - 0.868 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
71. SPR ENSGALG00000000067 3456 0.868 - - - - - - 0.868 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
72. INPP5E ENSGALG00000001964 3580 0.868 - - - - - - 0.868 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
73. NELL2 ENSGALG00000009601 4243 0.868 - - - - - - 0.868 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
74. ZFX ENSGALG00000016327 5470 0.867 - - - - - - 0.867 - - - zinc finger protein, X-linked, transcript variant X4
75. BYSL ENSGALG00000003467 7555 0.867 - - - - - - 0.867 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
76. MORC2 2505 0.866 - - - - - - 0.866 - - - MORC family CW-type zinc finger 2, transcript variant X2
77. FAM162A ENSGALG00000007378 8290 0.866 - - - - - - 0.866 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
78. METTL16 ENSGALG00000014901 3720 0.866 - - - - - - 0.866 - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
79. DHCR7 ENSGALG00000004106 4731 0.866 - - - - - - 0.866 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
80. RBFA ENSGALG00000036067 6542 0.865 - - - - - - 0.865 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
81. ENSGALG00000006671 ENSGALG00000006671 4194 0.865 - - - - - - 0.865 - - -
82. TCF25 ENSGALG00000000129 7587 0.864 - - - - - - 0.864 - - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
83. ZCCHC10 ENSGALG00000036666 5148 0.863 - - - - - - 0.863 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
84. C18H17ORF106 C18H17ORF106 2355 0.863 - - - - - - 0.863 - - -
85. EPRS ENSGALG00000009598 26412 0.863 - - - - - - 0.863 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
86. GPATCH2 ENSGALG00000009627 4061 0.862 - - - - - - 0.862 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
87. NOC3L ENSGALG00000035667 7441 0.862 - - - - - - 0.862 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
88. HAT1 ENSGALG00000009525 24864 0.862 - - - - - - 0.862 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
89. CCDC104 CCDC104 6584 0.862 - - - - - - 0.862 - - -
90. GINS1 ENSGALG00000008538 4786 0.861 - - - - - - 0.861 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
91. XPO6 ENSGALG00000035360 7042 0.861 - - - - - - 0.861 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
92. TAOK3 ENSGALG00000007396 3094 0.86 - - - - - - 0.860 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
93. SRP14 ENSGALG00000009592 17828 0.86 - - - - - - 0.860 - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
94. WDR5 ENSGALG00000002659 13008 0.86 - - - - - - 0.860 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
95. PISD ENSGALG00000006872 3539 0.86 - - - - - - 0.860 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
96. PHKG1 ENSGALG00000002485 15214 0.86 - - - - - - 0.860 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
97. FAM172A ENSGALG00000014661 10565 0.859 - - - - - - 0.859 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
98. NDUFV1 ENSGALG00000042809 6222 0.859 - - - - - - 0.859 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
99. LOC427439 ENSGALG00000003605 9312 0.859 - - - - - - 0.859 - - - Nipped-B homolog-like, transcript variant X1
100. TMEM47 ENSGALG00000027198 3619 0.859 - - - - - - 0.859 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]

There are 174 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA