Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB4A

Gene Name Gene ID Reads Annotation
RAB4A ENSGALG00000036218 20 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]











Genes with expression patterns similar to RAB4A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB4A ENSGALG00000036218 20 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
2. TRAF1 ENSGALG00000001583 3 2 - - - - - 1.000 - - - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
3. LRRC19 ENSGALG00000045028 2 1 - - - - - - - - - 1.000 leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
4. BCMO1 BCMO1 35 1 - - - - - 1.000 - - - -
5. ABI3BP ENSGALG00000015307 4 1 - - - - - 1.000 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
6. ZHX3 ENSGALG00000039155 5 1 - - - - - - - - - 1.000 zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
7. PEX26 ENSGALG00000019286 1 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
8. ENTPD2 ENSGALG00000039696 3 1 - - - - - - - - - 1.000 ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
9. EFHC2 ENSGALG00000016221 8 1 - - - - - - - - - 1.000 EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
10. TMEM201 ENSGALG00000002527 2 1 - - - - - 1.000 - - - - transmembrane protein 201
11. MOGAT1 ENSGALG00000005217 12 1 - - - - - - - - - 1.000 monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
12. ENSGALG00000020649 ENSGALG00000020649 2 1 - - - - - - - - - 1.000
13. ENSGALG00000020320 ENSGALG00000020320 1 1 - - - - - 1.000 - - - -
14. ELF5 ENSGALG00000035867 6 1 - - - - - - - - - 1.000 E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
15. TLR1LB TLR1LB 65 1 - - - - - - - - - 1.000
16. COG3 ENSGALG00000016980 15 1 - - - - - - - - - 1.000 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
17. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - - 1.000 - - - -
18. FOXN1 ENSGALG00000043868 3 1 - - - - - - - - - 1.000 forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
19. OLIG3 ENSGALG00000013862 51 1 - - - - - 1.000 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
20. KCNQ3 ENSGALG00000037626 6 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
21. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - - - 1.000
22. KCNRG ENSGALG00000017012 4 1 - - - - - - - - - 1.000 potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
23. ENSGALG00000025912 ENSGALG00000025912 4 1 - - - - - 1.000 - - - -
24. ITGAV ENSGALG00000002655 26 1 - - - - - 1.000 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
25. SCRIB ENSGALG00000032790 4 1 - - - - - - - - - 1.000 scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
26. TBPL2 ENSGALG00000012145 1 1 - - - - - - - - - 1.000 TATA-box binding protein like 2 [Source:NCBI gene;Acc:776269]
27. BAP1 ENSGALG00000004366 12 1 - - - - - 1.000 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
28. SLC38A7 ENSGALG00000002313 25 1 - - - - - 1.000 - - - - solute carrier family 38 member 7, transcript variant X5
29. DPF3 ENSGALG00000009352 7 1 - - - - - 1.000 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
30. ANKFN1 ENSGALG00000003105 15 1 - - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
31. CREB3 ENSGALG00000002523 23 1 - - - - - 1.000 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
32. PIGR ENSGALG00000000919 3 1 - - - - - - - - - 1.000 polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
33. VTG1 ENSGALG00000039354 17 1 - - - - - 1.000 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
34. PBEF1 PBEF1 25 1 - - - - - - - - - 1.000
35. ELFN2 ENSGALG00000012446 11 1 - - - - - - - - - 1.000 extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
36. SRPX2 ENSGALG00000006796 32 1 - - - - - 1.000 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
37. SHANK2 ENSGALG00000035916 9 1 - - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
38. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - - - 1.000
39. WNT3 ENSGALG00000001079 8 1 - - - - - 1.000 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
40. VWA3B ENSGALG00000040709 5 1 - - - - - 1.000 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
41. HTR7 ENSGALG00000040549 1 1 - - - - - - - - - 1.000 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
42. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - - - 1.000
43. INHBB ENSGALG00000028770 2 1 - - - - - 1.000 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
44. DTX1 ENSGALG00000027897 1 1 - - - - - - - - - 1.000 deltex E3 ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:3060]
45. CLDN19 ENSGALG00000023580 1 1 - - - - - 1.000 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
46. FUK ENSGALG00000002648 9 1 - - - - - - - - - 1.000 fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
47. TRPC7 ENSGALG00000006297 1 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]
48. FOLR1 ENSGALG00000017343 1 1 - - - - - - - - - 1.000 folate receptor 1 [Source:NCBI gene;Acc:395638]
49. DNM3 ENSGALG00000033244 6 1 - - - - - - - - - 1.000 dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
50. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - - - - 1.000 translin associated factor X interacting protein 1, transcript variant X2
51. ENSGALG00000009237 ENSGALG00000009237 3 1 - - - - - - - - - 1.000
52. STRA8 ENSGALG00000011722 4 1 - - - - - - - - - 1.000 stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
53. LOC423752 ENSGALG00000020899 17 1 - - - - - - - - - 1.000 uncharacterized LOC423752, transcript variant X1
54. TMEM181 ENSGALG00000013737 19 1 - - - - - 1.000 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
55. ACPP ENSGALG00000043415 4 1 - - - - - 1.000 - - - - acid phosphatase, prostate, transcript variant X2
56. ABCC8 ENSGALG00000006172 41 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
57. TRHDE ENSGALG00000010200 4 1 - - - - - - - - - 1.000 thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
58. BRF2 ENSGALG00000003124 1 1 - - - - - - - - - 1.000 BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
59. SMIM10 SMIM10 2 1 - - - - - 1.000 - - - -
60. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - 1.000 - - - -
61. GAL12 GAL12 2 1 - - - - - - - - - 1.000
62. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - - - 1.000
63. PLEKHG3 ENSGALG00000036199 1 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
64. Sep-03 Sep-03 109 0.995 - - - - - 0.995 - - - -
65. GPR132 ENSGALG00000027407 9 0.986 - - - - 0.986 - - - - - G protein-coupled receptor 132, transcript variant X2
66. ENSGALG00000018879 ENSGALG00000018879 9 0.986 - - - - 0.986 - - - - -
67. BRD8 ENSGALG00000037646 100 0.986 - - - - 0.986 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
68. SCG5 ENSGALG00000009725 10 0.981 - - - - - 0.981 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
69. MAPK10 ENSGALG00000011109 16 0.978 - - - - - 0.978 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
70. IRF-4 IRF-4 19 0.976 - - - - 0.976 - - - - -
71. CCL17 ENSGALG00000024466 10 0.975 - - - - - - - - - 0.975 C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
72. RNP ENSGALG00000028991 10 0.972 - - - - - - - - - 0.972 renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
73. SNORA74 SNORA74 8 0.971 - - - - - 0.971 - - - -
74. LRRC72 9 0.971 - - - - 0.971 - - - - - leucine rich repeat containing 72, transcript variant X4
75. STYK1 ENSGALG00000014759 3 0.971 - - - - - 0.971 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
76. UNCX ENSGALG00000039292 165 0.971 - - - - - 0.971 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
77. FHAD1 ENSGALG00000034761 3 0.97 - - - - - 0.970 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
78. GCNT7 ENSGALG00000007717 11 0.968 - - - - 0.968 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
79. CLDN16 ENSGALG00000025821 14 0.967 - - - - - - - - - 0.967 claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
80. LOC416530 ENSGALG00000005291 207 0.957 - - - - 0.957 - - - - - uncharacterized LOC416530, transcript variant X1
81. PCDH8 ENSGALG00000036258 1945 0.953 - - - - - 0.953 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
82. GALNT11 ENSGALG00000006233 210 0.953 - - - - 0.953 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
83. ITGA6 ENSGALG00000034007 53 0.952 - - - - - 0.952 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
84. CCDC6 ENSGALG00000003165 93 0.951 - - - - - 0.951 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
85. GC ENSGALG00000011612 53 0.949 - - - - - - - - - 0.949 GC, vitamin D binding protein [Source:NCBI gene;Acc:395696]
86. CCDC113 20 0.947 - - - - 0.947 - - - - - coiled-coil domain containing 113, transcript variant X2
87. STXBP5L ENSGALG00000032361 41 0.946 - - - - 0.946 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
88. ENSGALG00000026584 ENSGALG00000026584 77 0.945 - - - - - 0.945 - - - -
89. PSEN1 ENSGALG00000009320 15 0.942 - - - - - 0.942 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
90. SNORA44 SNORA44 29 0.937 - - - - - - - - - 0.937
91. SERGEF ENSGALG00000006231 35 0.936 - - - - - - - - - 0.936 secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
92. PITX1 ENSGALG00000030237 842 0.934 - - - - 0.934 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
93. MAK ENSGALG00000012770 32 0.932 - - - - - 0.932 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
94. PLCH2 ENSGALG00000001207 7 0.932 - - - - - 0.932 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
95. PIK3R3 ENSGALG00000010335 374 0.931 - - - - 0.931 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
96. TCTE1 ENSGALG00000010165 65 0.93 - - - - - 0.930 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
97. ENSGALG00000027143 ENSGALG00000027143 23 0.929 - - - - - - - - - 0.929
98. KSR1 ENSGALG00000005685 78 0.927 - - - - 0.927 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
99. DCLRE1B ENSGALG00000028626 48 0.919 - - - - - 0.919 - - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
100. DACH2 ENSGALG00000006886 426 0.919 - - - - - 0.919 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA