Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB40C

Gene Name Gene ID Reads Annotation
RAB40C ENSGALG00000030481 3095 RAB40C, member RAS oncogene family [Source:NCBI gene;Acc:769960]











Genes with expression patterns similar to RAB40C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB40C ENSGALG00000030481 3095 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB40C, member RAS oncogene family [Source:NCBI gene;Acc:769960]
2. SRSF1 ENSGALG00000005525 4376 1.578 - - - - - - 0.830 0.748 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
3. R3HDM1 ENSGALG00000012246 6580 1.465 - - - - - - 0.748 0.717 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
4. RPA3 ENSGALG00000010700 6212 1.46 - - - - - - 0.758 0.702 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
5. TSEN15 ENSGALG00000004782 2520 1.433 - - - - - - 0.723 0.710 - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
6. HSCB ENSGALG00000005706 12953 1.415 - - - - - - 0.702 0.713 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
7. SETD3 ENSGALG00000034802 4125 0.832 - - - - - - 0.832 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
8. MAK16 ENSGALG00000001663 7455 0.83 - - - - - - 0.830 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
9. MCFD2 ENSGALG00000010017 8905 0.827 - - - - - - 0.827 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
10. SUCLG2 ENSGALG00000007652 9688 0.827 - - - - - - 0.827 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
11. Mar-06 Mar-06 1218 0.821 - - - - - - 0.821 - - -
12. SMAD1 ENSGALG00000009977 3540 0.821 - - - - - - 0.821 - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
13. NOP58 ENSGALG00000008454 34630 0.817 - - - - - - 0.817 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
14. NR2C1 ENSGALG00000011327 5109 0.816 - - - - - - 0.816 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
15. HOXB-7 HOXB-7 2066 0.816 - - - - - - 0.816 - - -
16. RCN2 ENSGALG00000039284 17848 0.814 - - - - - - - 0.814 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
17. DDX27 ENSGALG00000006974 18388 0.814 - - - - - - 0.814 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
18. GALNT1 ENSGALG00000013135 13583 0.81 - - - - - - 0.810 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
19. LRRC41 ENSGALG00000010359 709 0.809 - - - - - - 0.809 - - - leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:HGNC:16917]
20. TIMM8A ENSGALG00000004963 14263 0.809 - - - - - - - 0.809 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
21. FAM114A2 ENSGALG00000004068 2970 0.807 - - - - - - 0.807 - - - family with sequence similarity 114 member A2 [Source:HGNC Symbol;Acc:HGNC:1333]
22. WBSCR22 6082 0.802 - - - - - - 0.802 - - - Williams-Beuren syndrome chromosome region 22
23. BLCAP ENSGALG00000027126 12200 0.8 - - - - - - 0.800 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
24. TFDP1 ENSGALG00000016823 17019 0.798 - - - - - - 0.798 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
25. KRR1 ENSGALG00000010227 11783 0.797 - - - - - - 0.797 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
26. GSN ENSGALG00000001446 5605 0.796 - - - - - - 0.796 - - - gelsolin [Source:NCBI gene;Acc:395774]
27. MMGT1 ENSGALG00000027199 5854 0.795 - - - - - - - 0.795 - - membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:28100]
28. ZRANB1 ENSGALG00000031474 3909 0.793 - - - - - - 0.793 - - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
29. APITD1 APITD1 11830 0.792 - - - - - - - 0.792 - -
30. DMD ENSGALG00000016281 5657 0.791 - - - - - - 0.791 - - - dystrophin [Source:NCBI gene;Acc:396236]
31. C12ORF57 C12ORF57 25906 0.791 - - - - - - 0.791 - - -
32. DCPS ENSGALG00000031143 10191 0.787 - - - - - - - 0.787 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
33. SECISBP2 ENSGALG00000010694 6990 0.787 - - - - - - 0.787 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
34. PFKL ENSGALG00000006543 4361 0.786 - - - - - - - 0.786 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
35. MRPS2 ENSGALG00000026303 12124 0.786 - - - - - - 0.786 - - - mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:14495]
36. FUNDC2 ENSGALG00000029585 9334 0.784 - - - - - - 0.784 - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
37. NDUFB3 ENSGALG00000008239 15511 0.784 - - - - - - 0.784 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
38. PTTG1 17936 0.784 - - - - - - 0.784 - - - pituitary tumor-transforming 1, transcript variant X1
39. MRPL40 ENSGALG00000001587 20893 0.783 - - - - - - 0.783 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
40. SRBD1 ENSGALG00000009990 4568 0.783 - - - - - - - 0.783 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
41. ACADL ENSGALG00000002891 8058 0.782 - - - - - - 0.782 - - - acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
42. TAF7 4725 0.781 - - - - - - 0.781 - - - TATA-box binding protein associated factor 7, transcript variant X1
43. YRDC ENSGALG00000029001 6529 0.781 - - - - - - 0.781 - - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
44. N4BP1 ENSGALG00000003907 1888 0.78 - - - - - - 0.780 - - - NEDD4 binding protein 1 [Source:NCBI gene;Acc:415739]
45. NFKB1 ENSGALG00000012304 1253 0.779 - - - - - - 0.779 - - - nuclear factor kappa B subunit 1 [Source:NCBI gene;Acc:396033]
46. CNOT8 ENSGALG00000003950 8271 0.778 - - - - - - 0.778 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
47. P4HA1 ENSGALG00000004325 4703 0.778 - - - - - - 0.778 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
48. RRP36 ENSGALG00000028056 7560 0.778 - - - - - - - 0.778 - - ribosomal RNA processing 36
49. TM2D2 ENSGALG00000003356 7088 0.777 - - - - - - - 0.777 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
50. AZIN1 ENSGALG00000029295 11085 0.777 - - - - - - - 0.777 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
51. SDHD ENSGALG00000007878 25129 0.777 - - - - - - 0.777 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
52. SYAP1 ENSGALG00000016548 3347 0.777 - - - - - - 0.777 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
53. CFDP1 ENSGALG00000002853 8562 0.776 - - - - - - - 0.776 - - craniofacial development protein 1 [Source:NCBI gene;Acc:374073]
54. ENSGALG00000009516 ENSGALG00000009516 5256 0.772 - - - - - - 0.772 - - -
55. ARFIP1 ENSGALG00000041361 7351 0.772 - - - - - - - 0.772 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
56. SLC12A4 ENSGALG00000034179 5674 0.771 - - - - - - - 0.771 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
57. OXSR1 ENSGALG00000005979 2905 0.771 - - - - - - 0.771 - - - oxidative stress responsive 1
58. MAD2L2 ENSGALG00000004640 3971 0.771 - - - - - - 0.771 - - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
59. COIL ENSGALG00000003158 7806 0.771 - - - - - - - 0.771 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
60. RSRC1 ENSGALG00000009669 5829 0.771 - - - - - - 0.771 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
61. COG5 ENSGALG00000042764 4205 0.77 - - - - - - 0.770 - - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
62. MOB3A ENSGALG00000031729 9690 0.77 - - - - - - - 0.770 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
63. NPAT ENSGALG00000017162 1574 0.769 - - - - - - 0.769 - - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
64. DAD1 ENSGALG00000035626 32604 0.769 - - - - - - 0.769 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
65. PLK1 ENSGALG00000006110 12892 0.768 - - - - - - - 0.768 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
66. PHPT1 ENSGALG00000039061 17343 0.768 - - - - - - - 0.768 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
67. ATL2 ENSGALG00000037289 7926 0.768 - - - - - - - 0.768 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
68. B4GAL-T7 B4GAL-T7 12356 0.767 - - - - - - - 0.767 - -
69. HYPK ENSGALG00000013916 4900 0.766 - - - - - - 0.766 - - - huntingtin interacting protein K [Source:NCBI gene;Acc:770307]
70. CDC40 ENSGALG00000015061 6118 0.766 - - - - - - 0.766 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
71. DESI2 ENSGALG00000010678 4590 0.765 - - - - - - - 0.765 - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
72. CZH9ORF41 CZH9ORF41 3492 0.764 - - - - - - - 0.764 - -
73. KIF18B ENSGALG00000031553 3192 0.764 - - - - - - 0.764 - - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
74. ZBTB49 ENSGALG00000015009 319 0.763 - - - - - - 0.763 - - - zinc finger and BTB domain containing 49 [Source:HGNC Symbol;Acc:HGNC:19883]
75. DNMT3A ENSGALG00000041454 9607 0.763 - - - - - - - 0.763 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
76. UBXN2A ENSGALG00000016497 2444 0.763 - - - - - - 0.763 - - - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
77. PCBP4 ENSGALG00000027695 7937 0.763 - - - - - - - 0.763 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
78. HMGN3 ENSGALG00000015880 30919 0.762 - - - - - - 0.762 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
79. NDUFS5 ENSGALG00000003625 27698 0.762 - - - - - - - 0.762 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
80. CTNND2 ENSGALG00000013001 11217 0.762 - - - - - - 0.762 - - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
81. DOHH ENSGALG00000017524 9420 0.762 - - - - - - - 0.762 - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
82. OCIAD1 ENSGALG00000014081 12065 0.762 - - - - - - 0.762 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
83. FNBP1L ENSGALG00000005850 9219 0.761 - - - - - - 0.761 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
84. SCPEP1 ENSGALG00000003185 2322 0.761 - - - - - - 0.761 - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
85. TM9SF2L ENSGALG00000006487 5566 0.761 - - - - - - 0.761 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
86. OSTC ENSGALG00000010526 19422 0.76 - - - - - - 0.760 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
87. ZUFSP 549 0.758 - - - - - - 0.758 - - - zinc finger with UFM1 specific peptidase domain
88. SEPSECS ENSGALG00000014386 2611 0.757 - - - - - - 0.757 - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:NCBI gene;Acc:422808]
89. FTSJ3 ENSGALG00000032993 8929 0.757 - - - - - - - 0.757 - - FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
90. RNF207 2949 0.757 - - - - - - 0.757 - - - ring finger protein 207, transcript variant X1
91. CLK1 ENSGALG00000028438 3550 0.757 - - - - - - - 0.757 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
92. FADS1 ENSGALG00000007127 5231 0.757 - - - - - - - 0.757 - - fatty acid desaturase 1
93. HMGXB4 ENSGALG00000044768 6005 0.757 - - - - - - - 0.757 - - HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]
94. CUTC ENSGALG00000037283 2530 0.756 - - - - - - 0.756 - - - cutC copper transporter [Source:NCBI gene;Acc:423829]
95. TBPL1 ENSGALG00000013981 3710 0.756 - - - - - - - 0.756 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
96. ADSS ENSGALG00000010702 7207 0.756 - - - - - - - 0.756 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
97. OXNAD1 ENSGALG00000011239 2521 0.755 - - - - - - - 0.755 - - oxidoreductase NAD binding domain containing 1 [Source:NCBI gene;Acc:420644]
98. ACTR3B ENSGALG00000006292 2235 0.755 - - - - - - 0.755 - - - ARP3 actin related protein 3 homolog B, transcript variant X1
99. C2H6orf52 ENSGALG00000012721 3631 0.753 - - - - - - 0.753 - - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
100. CREBL2 ENSGALG00000037030 1247 0.752 - - - - - - 0.752 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]

There are 228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA