Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB40B

Gene Name Gene ID Reads Annotation
RAB40B ENSGALG00000001545 8 RAB40B, member RAS oncogene family [Source:NCBI gene;Acc:417338]











Genes with expression patterns similar to RAB40B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB40B ENSGALG00000001545 8 4 - - - 1.000 1.000 - 1.000 1.000 - - RAB40B, member RAS oncogene family [Source:NCBI gene;Acc:417338]
2. TMEM71 ENSGALG00000044996 4 1.9 - - - 0.900 1.000 - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]
3. TRERF1 ENSGALG00000009896 42 1.678 - - - 0.769 - - - 0.909 - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
4. MBTD1 ENSGALG00000002954 254 1.451 - - - 0.738 - - 0.713 - - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
5. SNORD16 SNORD16 2 1 - - - - 1.000 - - - - -
6. KIAA1199 KIAA1199 6 1 - - - - 1.000 - - - - -
7. SPRY3 ENSGALG00000007448 1 1 - - - - 1.000 - - - - - sprouty RTK signaling antagonist 3 [Source:NCBI gene;Acc:428712]
8. SLC39A3 ENSGALG00000020582 1 1 - - - - 1.000 - - - - - solute carrier family 39 member 3 [Source:HGNC Symbol;Acc:HGNC:17128]
9. TM6SF2 ENSGALG00000029015 109 1 - - - - 1.000 - - - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
10. DFNB59 ENSGALG00000023439 4 1 - - - - 1.000 - - - - - deafness, autosomal recessive 59, transcript variant X1
11. PARD6A ENSGALG00000001214 9 1 - - - - 1.000 - - - - - par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]
12. MYPN ENSGALG00000003925 6 1 - - - - 1.000 - - - - - myopalladin [Source:HGNC Symbol;Acc:HGNC:23246]
13. RAB41 ENSGALG00000026278 2 1 - - - - 1.000 - - - - - RAB41, member RAS oncogene family, transcript variant X2
14. COR7A COR7A 3 1 - - - - 1.000 - - - - -
15. ARSH ENSGALG00000016636 34 1 - - - - 1.000 - - - - - arylsulfatase family, member H [Source:NCBI gene;Acc:378798]
16. ENSGALG00000025856 ENSGALG00000025856 3 1 - - - - 1.000 - - - - -
17. SH3GL3 ENSGALG00000006045 12 1 - - - - 1.000 - - - - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
18. NOG ENSGALG00000003114 12 1 - - - - 1.000 - - - - - noggin [Source:NCBI gene;Acc:373912]
19. CCDC178 6 0.989 - - - 0.989 - - - - - - coiled-coil domain containing 178, transcript variant X3
20. MIS18A ENSGALG00000015884 25 0.953 - - - - 0.953 - - - - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
21. DVL3 ENSGALG00000008414 38 0.949 - - - - - - - 0.949 - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
22. CADPS 33 0.935 - - - - 0.935 - - - - - calcium dependent secretion activator, transcript variant X19
23. MYH13 4 0.909 - - - - - - - 0.909 - - myosin, heavy chain 13, skeletal muscle
24. ENSGALG00000026135 ENSGALG00000026135 16 0.909 - - - - - - - 0.909 - -
25. FOXE3 11 0.909 - - - - - - - 0.909 - - forkhead box E3
26. GLYCTK ENSGALG00000004018 5 0.909 - - - - - - - 0.909 - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
27. CACNA1I ENSGALG00000035051 27 0.909 - - - - - - - 0.909 - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
28. ABL2 ENSGALG00000030357 39 0.909 - - - - - - - 0.909 - - ABL proto-oncogene 2, non-receptor tyrosine kinase, transcript variant X2
29. PFKFB2 ENSGALG00000001117 2 0.909 - - - - - - - 0.909 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
30. TUBB3 571 0.909 - - - - - - - 0.909 - - tubulin beta 3 class III
31. PLXNA4 ENSGALG00000006473 125 0.905 - - - - - - - 0.905 - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
32. GALNT11 ENSGALG00000006233 210 0.903 - - - - - - - 0.903 - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
33. CELSR3 ENSGALG00000036763 4 0.9 - - - 0.900 - - - - - - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
34. C3orf17 C3orf17 3 0.9 - - - 0.900 - - - - - -
35. TTBK1 ENSGALG00000008627 8 0.9 - - - 0.900 - - - - - - tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
36. DNAH9 ENSGALG00000001111 28 0.9 - - - 0.900 - - - - - - dynein axonemal heavy chain 9
37. FES ENSGALG00000008340 223 0.9 - - - 0.900 - - - - - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
38. GPR87 ENSGALG00000010377 3 0.9 - - - 0.900 - - - - - - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
39. TNKS ENSGALG00000043164 102 0.893 - - - - - - 0.893 - - - tankyrase [Source:NCBI gene;Acc:374252]
40. STARD10 ENSGALG00000002577 245 0.893 - - - - - - - 0.893 - - StAR related lipid transfer domain containing 10
41. GK ENSGALG00000016285 35 0.883 - - - - - - - 0.883 - - glycerol kinase, transcript variant X4
42. gga-mir-125b gga-mir-125b 146 0.877 - - - 0.877 - - - - - -
43. TPH2 ENSGALG00000010198 5 0.877 - - - - - - - 0.877 - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
44. SS4R SS4R 19 0.877 - - - - - - - 0.877 - -
45. gga-mir-1466 ENSGALG00000025170 487 0.874 - - - - - - - 0.874 - - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
46. GPHB5 ENSGALG00000028839 45 0.873 - - - - - - - 0.873 - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
47. UBA2 ENSGALG00000005006 243 0.87 - - - - - - - 0.870 - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
48. XK ENSGALG00000016262 60 0.864 - - - - - - - 0.864 - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
49. SLC35A3 12 0.864 - - - 0.864 - - - - - - solute carrier family 35 member A3, transcript variant X7
50. TPCN1 ENSGALG00000008357 28 0.862 - - - - - - 0.862 - - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
51. C17orf105 C17orf105 11 0.862 - - - - - - 0.862 - - -
52. NTNG1 ENSGALG00000031122 126 0.862 - - - - - - 0.862 - - - netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
53. ACKR4 ENSGALG00000041491 7 0.862 - - - - - - 0.862 - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
54. PET112 PET112 38 0.862 - - - - - - 0.862 - - -
55. CLOCK ENSGALG00000013793 9 0.862 - - - - - - 0.862 - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
56. ENSGALG00000027602 ENSGALG00000027602 20 0.862 - - - - - - 0.862 - - -
57. HOMER1 ENSGALG00000014813 19 0.862 - - - - - - 0.862 - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
58. SLC22A3 ENSGALG00000020002 4 0.862 - - - - - - 0.862 - - - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
59. ENSGALG00000026580 ENSGALG00000026580 4 0.862 - - - - - - 0.862 - - -
60. HSPB7L ENSGALG00000028183 795 0.862 - - - - - - 0.862 - - - heat shock protein beta-7-like
61. FEM1A ENSGALG00000004168 14 0.862 - - - - - - 0.862 - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
62. B3GALT6 ENSGALG00000001859 5 0.862 - - - - - - 0.862 - - - beta-1,3-galactosyltransferase 6
63. ADIPOQ ENSGALG00000005554 3 0.862 - - - - - - 0.862 - - - adiponectin, C1Q and collagen domain containing [Source:NCBI gene;Acc:404536]
64. SLC26A2 ENSGALG00000001239 3 0.862 - - - - - - 0.862 - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
65. TRPV1 ENSGALG00000004649 17 0.862 - - - - - - 0.862 - - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
66. ARNTL ENSGALG00000005378 19 0.862 - - - - - - 0.862 - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
67. ENSGALG00000027210 ENSGALG00000027210 5 0.862 - - - - - - 0.862 - - -
68. PPP1R36 ENSGALG00000040026 24 0.862 - - - - - - 0.862 - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
69. UBE4B ENSGALG00000002649 39 0.862 - - - - - - 0.862 - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
70. CDH6 ENSGALG00000012917 17 0.862 - - - - - - 0.862 - - - cadherin 6 [Source:NCBI gene;Acc:414842]
71. MID2 ENSGALG00000003860 3 0.862 - - - - - - 0.862 - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
72. DSC1 ENSGALG00000015140 16 0.862 - - - - - - 0.862 - - - desmocollin 1, transcript variant X1
73. DPP10 ENSGALG00000012156 20 0.862 - - - - - - 0.862 - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
74. STEAP2 ENSGALG00000009017 10 0.851 - - - - - - - 0.851 - - STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
75. NDST3 22 0.848 - - - - 0.848 - - - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
76. GHSR ENSGALG00000027947 24 0.843 - - - 0.843 - - - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
77. NEU2 ENSGALG00000037467 34 0.843 - - - - 0.843 - - - - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
78. EPB41L5 ENSGALG00000011605 18 0.839 - - - - - - - 0.839 - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
79. OXR1 44 0.829 - - - - - - - 0.829 - - oxidation resistance 1, transcript variant X7
80. FMOD ENSGALG00000034067 165 0.828 - - - - - - - 0.828 - - fibromodulin [Source:NCBI gene;Acc:395814]
81. STXBP5L ENSGALG00000032361 41 0.827 - - - - - - - 0.827 - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
82. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 0.823 - - - 0.823 - - - - - - MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
83. VEGFRKDRL ENSGALG00000007646 18 0.821 - - - 0.821 - - - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
84. ANKEF1 ENSGALG00000008996 12 0.814 - - - - - - - 0.814 - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
85. PITPNM2 ENSGALG00000003645 17 0.81 - - - 0.810 - - - - - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
86. CCDC157 ENSGALG00000007907 10 0.803 - - - 0.803 - - - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
87. CACNA1E ENSGALG00000003833 112 0.799 - - - - - - - 0.799 - - calcium voltage-gated channel subunit alpha1 E [Source:HGNC Symbol;Acc:HGNC:1392]
88. CUTA ENSGALG00000001620 76 0.795 - - - - 0.795 - - - - - cutA divalent cation tolerance homolog
89. ILDR2 ENSGALG00000015458 16 0.793 - - - 0.793 - - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
90. SBSPONL ENSGALG00000005862 129 0.792 - - - - 0.792 - - - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
91. ENSGALG00000020194 ENSGALG00000020194 22 0.789 - - - - - - 0.789 - - -
92. CERS6 ENSGALG00000010902 14 0.784 - - - 0.784 - - - - - - ceramide synthase 6 [Source:HGNC Symbol;Acc:HGNC:23826]
93. ARV1 ENSGALG00000011155 38 0.783 - - - 0.783 - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
94. FAM173A ENSGALG00000021364 4 0.779 - - - - - - - 0.779 - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
95. ANG ANG 15 0.775 - - - - - - 0.775 - - -
96. TERF2IP ENSGALG00000000903 41 0.773 - - - - - - 0.773 - - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
97. OSBPL6 ENSGALG00000009172 96 0.772 - - - 0.772 - - - - - - oxysterol binding protein like 6 [Source:HGNC Symbol;Acc:HGNC:16388]
98. CAT-1 CAT-1 115 0.771 - - - 0.771 - - - - - -
99. C-MYB C-MYB 734 0.77 - - - - - - - 0.770 - -
100. CIT ENSGALG00000007354 150 0.769 - - - - - - - 0.769 - - citron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA