Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB3B

Gene Name Gene ID Reads Annotation
RAB3B ENSGALG00000010567 894 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]











Genes with expression patterns similar to RAB3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB3B ENSGALG00000010567 894 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
2. CXorf30 CXorf30 172 1.863 - - 0.939 - - - - - - 0.924
3. EXTL2 ENSGALG00000027984 808 1.838 - - 0.966 - - - - - - 0.872 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
4. SLC4A4 ENSGALG00000031105 534 1.783 - - 0.972 - - - - 0.811 - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
5. SLC35D1 ENSGALG00000011121 4456 1.569 - - 0.784 - - 0.785 - - - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
6. GRAMD1C ENSGALG00000035629 2494 1.534 - - 0.804 - - - - - - 0.730 GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
7. LYPD6B ENSGALG00000028759 831 0.971 - - 0.971 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
8. ZNF423 ENSGALG00000003891 103 0.967 - - 0.967 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
9. PLEKHG5 ENSGALG00000027476 42 0.966 - - 0.966 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
10. POMC ENSGALG00000016600 99 0.966 - - 0.966 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
11. RHOC ENSGALG00000001569 53 0.966 - - 0.966 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
12. MGMT ENSGALG00000042949 53 0.965 - - 0.965 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
13. GRIK3 ENSGALG00000002098 111 0.965 - - 0.965 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
14. TMEM97 ENSGALG00000005702 2037 0.964 - - 0.964 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
15. KIAA0195 KIAA0195 48 0.964 - - 0.964 - - - - - - -
16. ENSGALG00000023180 ENSGALG00000023180 83 0.963 - - 0.963 - - - - - - -
17. RPUSD1 ENSGALG00000005315 651 0.962 - - 0.962 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
18. ZEB2 ENSGALG00000040465 315 0.962 - - 0.962 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
19. MT1 MT1 218 0.961 - - 0.961 - - - - - - -
20. ADAMTS2 ENSGALG00000032974 141 0.96 - - 0.960 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
21. INTS9 ENSGALG00000016631 742 0.959 - - 0.959 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
22. GOLGA2 ENSGALG00000004881 677 0.957 - - 0.957 - - - - - - - golgin A2, transcript variant X7
23. ACOT9 ENSGALG00000016351 330 0.957 - - 0.957 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
24. AP3M1 ENSGALG00000005070 712 0.955 - - 0.955 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
25. LGALS3 ENSGALG00000012173 3306 0.955 - - 0.955 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
26. NCAPD3 ENSGALG00000001491 221 0.955 - - 0.955 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
27. ATP2B2 ENSGALG00000030908 584 0.952 - - 0.952 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
28. MAN1A1 ENSGALG00000014878 1061 0.952 - - 0.952 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
29. CASP1 ENSGALG00000001049 1067 0.951 - - 0.951 - - - - - - - caspase 1, transcript variant X2
30. C8H1ORF52 C8H1ORF52 118 0.95 - - 0.950 - - - - - - -
31. FBXO34 ENSGALG00000032563 656 0.949 - - 0.949 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
32. PKP4 ENSGALG00000012561 3087 0.949 - - 0.949 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
33. SORCS1 ENSGALG00000008465 468 0.948 - - 0.948 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
34. EIF2AK2 ENSGALG00000010560 749 0.948 - - 0.948 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
35. ENTPD5 ENSGALG00000010202 69 0.948 - - 0.948 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
36. TSEN2 ENSGALG00000004981 1929 0.947 - - 0.947 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
37. LHFP 167 0.947 - - 0.947 - - - - - - - lipoma HMGIC fusion partner
38. BMP2 ENSGALG00000029301 379 0.947 - - 0.947 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
39. IP6K1 ENSGALG00000002510 827 0.947 - - 0.947 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
40. TRIM45 ENSGALG00000014818 1258 0.946 - - 0.946 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
41. SYBU ENSGALG00000036527 1221 0.946 - - 0.946 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
42. TMEM38B ENSGALG00000027472 2465 0.946 - - 0.946 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
43. C19H17ORF85 C19H17ORF85 2538 0.943 - - 0.943 - - - - - - -
44. WDR11 ENSGALG00000035013 3393 0.943 - - 0.943 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
45. CCDC25 ENSGALG00000016586 351 0.943 - - 0.943 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
46. GBGT1 ENSGALG00000003340 399 0.942 - - 0.942 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
47. SULT2B1L1 ENSGALG00000023472 569 0.941 - - 0.941 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
48. ZOV3 ZOV3 3267 0.941 - - 0.941 - - - - - - -
49. LRP2 ENSGALG00000010858 363 0.94 - - 0.940 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
50. MYO18A ENSGALG00000003741 1023 0.94 - - 0.940 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
51. CDV3 ENSGALG00000032316 693 0.939 - - 0.939 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
52. MOCS1 ENSGALG00000010051 70 0.939 - - - - - - - - - 0.939 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
53. SDCBP ENSGALG00000015436 1228 0.935 - - 0.935 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
54. PCP4 ENSGALG00000022819 880 0.935 - - 0.935 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
55. DRD2 ENSGALG00000007794 399 0.934 - - - - - - - - - 0.934 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
56. Sep-02 Sep-02 206 0.934 - - 0.934 - - - - - - -
57. YLPM1 671 0.934 - - 0.934 - - - - - - - YLP motif containing 1
58. LRR1 ENSGALG00000012230 1062 0.933 - - 0.933 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
59. ZNF395 ENSGALG00000034140 1868 0.93 - - 0.930 - - - - - - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
60. RUFY2 1442 0.93 - - 0.930 - - - - - - - RUN and FYVE domain containing 2, transcript variant X1
61. FBF1 ENSGALG00000002179 1738 0.93 - - 0.930 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
62. KLHL15 ENSGALG00000016345 1638 0.93 - - 0.930 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
63. OSGEPL1 ENSGALG00000037727 1879 0.928 - - 0.928 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
64. LMO4 ENSGALG00000006252 3686 0.928 - - 0.928 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
65. LZIC ENSGALG00000002616 9052 0.928 - - 0.928 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
66. TRH ENSGALG00000008490 16 0.927 - - - - - - - - - 0.927 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
67. NAGPA 5 0.927 - - - - - - - - - 0.927 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
68. TSN ENSGALG00000011652 905 0.927 - - 0.927 - - - - - - - translin [Source:NCBI gene;Acc:395955]
69. MPG ENSGALG00000028691 1874 0.927 - - 0.927 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
70. CCR4 ENSGALG00000039146 20 0.927 - - - - - - - - - 0.927 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
71. ENSGALG00000026925 ENSGALG00000026925 119 0.927 - - - - - - - - - 0.927
72. CNTNAP4 ENSGALG00000023179 13 0.927 - - - - - - - - - 0.927 contactin associated protein like 4
73. PSTPIP1 ENSGALG00000002786 9 0.927 - - - - - - - - - 0.927 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
74. DSTYK ENSGALG00000041123 12 0.927 - - - - - - - - - 0.927 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
75. DRAM1 ENSGALG00000012761 53 0.927 - - - - - - - - - 0.927 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
76. SIDT1 ENSGALG00000014812 20 0.927 - - - - - - - - - 0.927 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
77. TXNDC12 ENSGALG00000010569 13822 0.926 - - 0.926 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
78. MSRA ENSGALG00000028032 2607 0.925 - - 0.925 - - - - - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
79. DLX5 ENSGALG00000009129 1395 0.925 - - 0.925 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
80. ARL15 ENSGALG00000014911 13 0.925 - - - - - - - - - 0.925 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
81. MUC6 ENSGALG00000040530 11 0.925 - - - - - - - - - 0.925 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
82. AZI2 ENSGALG00000011428 24 0.925 - - - - - - - - - 0.925 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
83. CCT8 ENSGALG00000015821 12161 0.924 - - 0.924 - - - - - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
84. EPB41 ENSGALG00000001329 787 0.923 - - 0.923 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
85. DAPK3 ENSGALG00000037733 6215 0.923 - - 0.923 - - - - - - - death-associated protein kinase 3, transcript variant X2
86. SYNCRIP ENSGALG00000015830 30555 0.923 - - 0.923 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
87. WDR89 ENSGALG00000011827 1481 0.92 - - 0.920 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
88. GNMT ENSGALG00000043290 3288 0.919 - - 0.919 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
89. WBSCR17 581 0.919 - - 0.919 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
90. TTC39A ENSGALG00000010540 1025 0.919 - - 0.919 - - - - - - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
91. DDX18 ENSGALG00000012147 12463 0.919 - - 0.919 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
92. MALSU1 ENSGALG00000010954 51 0.919 - - - - - - - - - 0.919 mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
93. ATG10 ENSGALG00000027714 1100 0.918 - - 0.918 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
94. KIAA0930 ENSGALG00000014226 1243 0.918 - - 0.918 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
95. USP40 ENSGALG00000004228 1137 0.918 - - 0.918 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
96. METTL13 ENSGALG00000003206 1503 0.918 - - 0.918 - - - - - - - methyltransferase like 13 [Source:HGNC Symbol;Acc:HGNC:24248]
97. FBXL4 ENSGALG00000015490 12 0.917 - - - - - - - - - 0.917 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
98. PCDH12 ENSGALG00000002544 36 0.917 - - - - - - - - - 0.917 protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
99. C5H14ORF166 C5H14ORF166 24176 0.917 - - 0.917 - - - - - - -
100. VRTN ENSGALG00000010232 692 0.917 - - 0.917 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]

There are 448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA