Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB38

Gene Name Gene ID Reads Annotation
RAB38 ENSGALG00000028018 1046 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]











Genes with expression patterns similar to RAB38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB38 ENSGALG00000028018 1046 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
2. COL8A1 ENSGALG00000015253 2505 6.19 - - 0.863 0.960 0.862 0.975 0.824 0.880 - 0.826 collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
3. T ENSGALG00000011489 2619 6.161 - 0.708 0.884 0.985 0.897 0.942 0.930 - - 0.815 T brachyury transcription factor [Source:NCBI gene;Acc:395782]
4. SST ENSGALG00000007361 1383 5.921 - - 0.955 0.803 0.869 0.894 0.770 0.880 - 0.750 somatostatin [Source:NCBI gene;Acc:396279]
5. OSF-2 OSF-2 10433 5.698 - 0.734 0.819 0.788 - 0.783 0.844 0.892 - 0.838
6. C9H2ORF82 ENSGALG00000040264 4201 5.519 - - 0.905 0.944 0.912 0.888 0.943 0.927 - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
7. SAMD3 ENSGALG00000032409 459 5.359 - - - 0.994 0.812 0.963 0.781 0.973 - 0.836 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
8. TAC1 ENSGALG00000009737 2211 5.319 - 0.769 0.941 0.933 - 0.921 0.864 0.891 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
9. COL9A1 ENSGALG00000015970 3788 5.233 - - 0.859 0.928 0.878 0.940 0.910 - - 0.718 collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
10. COL9A3 ENSGALG00000005628 2842 5.209 - - 0.895 0.845 0.818 0.829 0.890 0.932 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
11. COL9A2 ENSGALG00000027526 4685 5.171 - - 0.862 0.849 0.837 0.954 0.719 0.950 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
12. SCARA3 ENSGALG00000026651 2559 5.105 - - 0.879 0.851 0.783 0.904 0.810 0.878 - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
13. SPON2 ENSGALG00000038433 1240 5.024 - - - 0.843 0.708 0.964 0.850 0.903 - 0.756 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
14. LRRTM1 ENSGALG00000015967 85 4.733 - - 0.818 0.813 - 0.870 0.795 0.734 - 0.703 leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
15. LECT1 LECT1 12694 4.668 - 0.712 0.761 0.773 0.708 - 0.811 0.903 - -
16. TIMP3 ENSGALG00000028627 8706 4.352 - - 0.817 0.915 0.795 0.885 - 0.940 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
17. EMILIN3 ENSGALG00000030012 6200 4.171 - - 0.755 0.848 0.856 0.928 0.784 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
18. ZNF385B ENSGALG00000009012 290 4.016 - - 0.784 0.818 0.739 0.922 - 0.753 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
19. WWP2 ENSGALG00000000699 5040 3.984 - - 0.897 0.709 - 0.793 0.851 0.734 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
20. OCA2 ENSGALG00000016740 421 3.597 - - - 0.881 0.825 0.953 - 0.938 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
21. ENSGALG00000008822 ENSGALG00000008822 221 2.566 - - 0.738 - - 0.976 - - - 0.852
22. ACAN ENSGALG00000006725 184 2.534 - - - - - 0.885 - 0.907 - 0.742 aggrecan [Source:NCBI gene;Acc:395798]
23. SLC15A5 ENSGALG00000013097 213 2.523 - - - - 0.722 0.953 0.848 - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
24. SHH ENSGALG00000006379 1943 2.265 - - 0.792 - - - 0.760 - - 0.713 sonic hedgehog [Source:NCBI gene;Acc:395615]
25. SCIN ENSGALG00000010770 883 2.257 - - 0.763 0.751 - 0.743 - - - - scinderin [Source:NCBI gene;Acc:420588]
26. ZNF536 ENSGALG00000035602 1127 2.241 - - - 0.748 - - 0.738 - - 0.755 zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]
27. EPB41L3 ENSGALG00000038678 5863 2.194 - - 0.757 0.729 - - 0.708 - - - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]
28. NPY7R ENSGALG00000021303 215 1.866 - - - 0.945 - 0.921 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
29. PCDH17 ENSGALG00000016941 1006 1.82 - - - - - 0.902 - 0.918 - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
30. COL11A1 ENSGALG00000005180 244 1.733 - - - 0.917 - - - - - 0.816 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
31. RRAD ENSGALG00000005140 183 1.715 - - - - - 0.957 - - - 0.758 RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
32. TXNRD1 ENSGALG00000035345 4784 1.706 - - 0.785 0.921 - - - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
33. CCK ENSGALG00000029788 213 1.673 - - - - - 0.956 - 0.717 - - cholecystokinin [Source:NCBI gene;Acc:414884]
34. POMC ENSGALG00000016600 99 1.654 - - - - 0.747 - - 0.907 - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
35. RGS4 ENSGALG00000002564 201 1.63 - - - - - 0.800 0.830 - - - regulator of G-protein signaling 4 [Source:NCBI gene;Acc:378901]
36. ENSGALG00000013409 ENSGALG00000013409 4 1.622 - - - - - 0.797 - - - 0.825
37. DCLRE1B ENSGALG00000028626 48 1.599 - - - - - - - 0.852 - 0.747 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
38. TMEM163 ENSGALG00000012190 72 1.578 - - 0.781 - - 0.797 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
39. TF ENSGALG00000006453 14007 1.545 - - 0.795 - - 0.750 - - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
40. IYD ENSGALG00000012392 315 1.544 - - - - - 0.818 - - - 0.726 iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
41. ARHGAP39 ENSGALG00000001536 15 1.536 - - - - - - - 0.734 - 0.802 Rho GTPase activating protein 39, transcript variant X2
42. MAVS ENSGALG00000040428 1 1.531 - - - - - 0.797 - 0.734 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
43. PABPN1L ENSGALG00000006242 3 1.531 - - - - - 0.797 - 0.734 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
44. C17orf105 C17orf105 11 1.531 - - - - - 0.797 - 0.734 - -
45. PROK2 ENSGALG00000007785 55 1.466 - - - 0.752 0.714 - - - - - prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
46. SNAPC1 ENSGALG00000011868 65 1.449 - - - - - 0.715 - 0.734 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
47. RASGRF2 ENSGALG00000015598 30 0.978 - - - - - - - 0.978 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
48. PIGM ENSGALG00000010768 41 0.978 - - - - - - - 0.978 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
49. KCNG1 ENSGALG00000007980 26 0.973 - - - - - 0.973 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
50. HOXA10 ENSGALG00000026631 1 0.973 - - - - - 0.973 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
51. APOD ENSGALG00000006995 2 0.973 - - - - - 0.973 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
52. LEFTY2 ENSGALG00000009256 1 0.971 - - - - - 0.971 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
53. PTH3R PTH3R 214 0.971 - - - - - 0.971 - - - -
54. FNDC1 ENSGALG00000011663 1040 0.963 - - - - - - - 0.963 - - fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
55. SCARA5 ENSGALG00000016580 712 0.946 - - - - - 0.946 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
56. GPR158 ENSGALG00000007667 111 0.935 - - - - - - - 0.935 - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
57. WIF1 ENSGALG00000039209 863 0.921 - - - - - 0.921 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
58. B3GNT7 ENSGALG00000007701 929 0.92 - - - - - 0.920 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
59. CHRDL1 ENSGALG00000008072 711 0.914 - - - - - 0.914 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
60. NCBP2 ENSGALG00000006843 938 0.912 - - - - - - - 0.912 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
61. MOV10 ENSGALG00000001558 244 0.909 - - - - - - - - - 0.909 Mov10 RISC complex RNA helicase [Source:NCBI gene;Acc:419872]
62. BCMO1 BCMO1 35 0.904 - - - - - - - - - 0.904
63. RGS18 ENSGALG00000021143 120 0.893 - - - - - 0.893 - - - - regulator of G-protein signaling 18 [Source:NCBI gene;Acc:424361]
64. GEMIN8 ENSGALG00000016574 18 0.888 - - - - - - - 0.888 - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
65. KIAA1217 ENSGALG00000007766 144 0.885 - - - - - 0.885 - - - - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
66. CCL17 ENSGALG00000024466 10 0.885 - - - - - 0.885 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
67. MYL1 ENSGALG00000002907 1300 0.884 - - - - - 0.884 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
68. OBSCN ENSGALG00000032534 20 0.871 - - - 0.871 - - - - - - obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF [Source:HGNC Symbol;Acc:HGNC:15719]
69. GNOT1 GNOT1 22 0.868 - - - - - - - 0.868 - -
70. LOC428824 ENSGALG00000004393 358 0.866 - - - - - 0.866 - - - - SITS-binding protein-like, transcript variant X1
71. WDR16 WDR16 22 0.864 - - - - - - 0.864 - - -
72. TNFSF10 ENSGALG00000009179 226 0.828 - - - - - - - - - 0.828 tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
73. SLC22A15 ENSGALG00000015016 12 0.825 - - - - - - - - - 0.825 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
74. gga-mir-1556 ENSGALG00000025512 2 0.825 - - - - - - - - - 0.825 gga-mir-1556 [Source:miRBase;Acc:MI0007281]
75. ATXN1 ENSGALG00000012709 2 0.825 - - - - - - - - - 0.825 ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
76. UGT2A1 ENSGALG00000011805 2 0.825 - - - - - - - - - 0.825 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus, transcript variant X3
77. ENSGALG00000021386 ENSGALG00000021386 29 0.825 - - - - - - - - - 0.825
78. ENSGALG00000010883 ENSGALG00000010883 10 0.825 - - - - - - - - - 0.825
79. SLC26A5 ENSGALG00000008222 3 0.825 - - - - - - - - - 0.825 solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
80. PGR ENSGALG00000017195 2 0.825 - - - - - - - - - 0.825 progesterone receptor [Source:NCBI gene;Acc:396198]
81. CNTNAP5 ENSGALG00000011577 2 0.825 - - - - - - - - - 0.825 contactin associated protein like 5 [Source:NCBI gene;Acc:424231]
82. ENSGALG00000023012 ENSGALG00000023012 2 0.825 - - - - - - - - - 0.825
83. FOLH1 ENSGALG00000017234 9 0.825 - - - - - - - - - 0.825 folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
84. SLC24A4 ENSGALG00000010793 238 0.823 - - - - - - - 0.823 - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
85. ENSGALG00000010113 ENSGALG00000010113 508 0.822 - - - - - - 0.822 - - -
86. DPY19L4 ENSGALG00000039222 30 0.822 - - - - - - - - - 0.822 dpy-19 like 4 [Source:HGNC Symbol;Acc:HGNC:27829]
87. KAZALD1 ENSGALG00000007837 2463 0.822 - - - - - 0.822 - - - - Kazal type serine peptidase inhibitor domain 1 [Source:HGNC Symbol;Acc:HGNC:25460]
88. FBLN1 ENSGALG00000014233 5062 0.819 - - - - - - - - - 0.819 fibulin 1 [Source:NCBI gene;Acc:373979]
89. VPAC2 VPAC2 45 0.819 - - - - - 0.819 - - - -
90. ENSGALG00000027568 ENSGALG00000027568 3 0.812 - - - - - - - - - 0.812
91. IRF8 ENSGALG00000005757 5 0.812 - - - - - - - - - 0.812 interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
92. PALM2 ENSGALG00000015655 20 0.811 - - - - - - - - - 0.811 paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
93. GDPD5 ENSGALG00000034967 1983 0.81 - - - - - - 0.810 - - - glycerophosphodiester phosphodiesterase domain containing 5 [Source:NCBI gene;Acc:419070]
94. PRDM16 ENSGALG00000036728 934 0.81 - - - - - - - 0.810 - - PR/SET domain 16 [Source:HGNC Symbol;Acc:HGNC:14000]
95. PAX1 ENSGALG00000039040 3339 0.809 - - 0.809 - - - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
96. PCDH12 ENSGALG00000002544 36 0.809 - - - - - - - 0.809 - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
97. ENSGALG00000028652 ENSGALG00000028652 65 0.804 - - - - - - - - - 0.804
98. ENSGALG00000028367 ENSGALG00000028367 102 0.802 - - - - - - - - - 0.802
99. ENSGALG00000007080 ENSGALG00000007080 20 0.801 - - - - - - - - - 0.801
100. SNX8 ENSGALG00000004255 4 0.797 - - - - - 0.797 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]

There are 215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA