Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB23

Gene Name Gene ID Reads Annotation
RAB23 ENSGALG00000016279 597 ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]











Genes with expression patterns similar to RAB23

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB23 ENSGALG00000016279 597 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
2. DRD2 ENSGALG00000007794 399 1 - - - - 1.000 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
3. LOC770492 ENSGALG00000027778 695 1 - - - - 1.000 - - - - - ras-related and estrogen-regulated growth inhibitor-like
4. ZNF318 ENSGALG00000034040 1758 0.999 - - - - 0.999 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
5. FANCM ENSGALG00000031182 1030 0.999 - - - - 0.999 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
6. ERICH1 ENSGALG00000031021 1495 0.999 - - - - 0.999 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
7. ADPGK ENSGALG00000001788 208 0.999 - - - - 0.999 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
8. AP1S3 ENSGALG00000005171 2981 0.998 - - - - 0.998 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
9. IL4RA IL4RA 1237 0.998 - - - - 0.998 - - - - -
10. TEL TEL 1231 0.998 - - - - 0.998 - - - - -
11. DNAJA1 ENSGALG00000023066 3820 0.997 - - - - 0.997 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
12. Sep-11 Sep-11 2005 0.997 - - - - 0.997 - - - - -
13. OGFOD3 ENSGALG00000001618 2438 0.997 - - - - 0.997 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
14. TCERG1L ENSGALG00000010470 490 0.997 - - - - 0.997 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
15. KLF3 ENSGALG00000041717 2787 0.996 - - - - 0.996 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
16. CALCA CALCA 682 0.996 - - - - 0.996 - - - - -
17. DAP3 ENSGALG00000019796 13278 0.996 - - - - 0.996 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
18. FZD6 ENSGALG00000030626 3336 0.996 - - - - 0.996 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
19. ZBTB8OS ENSGALG00000003517 2436 0.996 - - - - 0.996 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
20. IFT172 ENSGALG00000016509 1226 0.996 - - - - 0.996 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
21. ALDH18A1 ENSGALG00000034655 3038 0.996 - - - - 0.996 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
22. VCPKMT ENSGALG00000012269 2107 0.996 - - - - 0.996 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
23. BBS2 ENSGALG00000042415 1816 0.995 - - - - 0.995 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
24. COQ3 ENSGALG00000015486 3508 0.995 - - - - 0.995 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
25. TMEM203 ENSGALG00000008925 3033 0.995 - - - - 0.995 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
26. PRKCD ENSGALG00000002016 1476 0.995 - - - - 0.995 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
27. ARPP21 ENSGALG00000043240 2403 0.995 - - - - 0.995 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
28. SMC6 ENSGALG00000016467 3321 0.994 - - - - 0.994 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
29. REXO5 ENSGALG00000002239 2466 0.994 - - - - 0.994 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
30. CRCP ENSGALG00000002587 8809 0.994 - - - - 0.994 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
31. DLGAP5 ENSGALG00000012165 2406 0.994 - - - - 0.994 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
32. CGT CGT 948 0.993 - - - - 0.993 - - - - -
33. RNF207 2949 0.992 - - - - 0.992 - - - - - ring finger protein 207, transcript variant X1
34. TMEM97 ENSGALG00000005702 2037 0.992 - - - - 0.992 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
35. NQO2 ENSGALG00000025747 2287 0.992 - - - - 0.992 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
36. METTL25 1538 0.992 - - - - 0.992 - - - - - methyltransferase like 25, transcript variant X1
37. SLC25A15 ENSGALG00000017032 6773 0.991 - - - - 0.991 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
38. RASA2 ENSGALG00000002850 2231 0.989 - - - - 0.989 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
39. RPAP3 ENSGALG00000009743 3380 0.989 - - - - 0.989 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
40. ROCK1 ENSGALG00000014922 4020 0.989 - - - - 0.989 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
41. ITPA ENSGALG00000003250 7722 0.989 - - - - 0.989 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
42. TMX4 ENSGALG00000028587 3513 0.988 - - - - 0.988 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
43. TMEM184C ENSGALG00000010019 7856 0.986 - - - - 0.986 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
44. ATAD5 ENSGALG00000003294 4830 0.986 - - - - 0.986 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
45. ATP5J 14451 0.986 - - - - 0.986 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
46. MICALL1 ENSGALG00000012265 3753 0.986 - - - - 0.986 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
47. KIAA1524 ENSGALG00000015360 3527 0.985 - - - - 0.985 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]
48. COG6 ENSGALG00000017035 2777 0.985 - - - - 0.985 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
49. ZZZ3 ENSGALG00000008988 3132 0.985 - - - - 0.985 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
50. TXNDC11 ENSGALG00000003154 2224 0.984 - - - - 0.984 - - - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
51. DNAJC25 ENSGALG00000015684 4554 0.984 - - - - 0.984 - - - - - DnaJ heat shock protein family (Hsp40) member C25
52. SPSB1 ENSGALG00000002506 2205 0.983 - - - - 0.983 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
53. PDHB ENSGALG00000029576 12254 0.983 - - - - 0.983 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
54. DHX33 ENSGALG00000001630 7783 0.982 - - - - 0.982 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
55. SLC9A3R2 ENSGALG00000005608 4220 0.982 - - - - 0.982 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
56. ATPAF1 ENSGALG00000010444 3677 0.982 - - - - 0.982 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
57. PEX2 ENSGALG00000035752 4427 0.982 - - - - 0.982 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
58. POLR1B ENSGALG00000032273 3845 0.981 - - - - 0.981 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
59. GLI2 ENSGALG00000011630 3347 0.98 - - - - 0.980 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
60. EXOSC3 ENSGALG00000002426 7255 0.98 - - - - 0.980 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
61. ROR2 ENSGALG00000015208 1323 0.98 - - - - 0.980 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
62. MDFIC ENSGALG00000026838 3881 0.98 - - - - 0.980 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
63. PLS3 ENSGALG00000005930 12625 0.979 - - - - 0.979 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
64. TAF13 ENSGALG00000015185 11410 0.979 - - - - 0.979 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
65. MYBBP1A ENSGALG00000001363 10331 0.979 - - - - 0.979 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
66. GALNTL4 GALNTL4 3548 0.978 - - - - 0.978 - - - - -
67. HMGN1 ENSGALG00000016067 17375 0.976 - - - - 0.976 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
68. PLA2G12A ENSGALG00000012185 5261 0.976 - - - - 0.976 - - - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
69. THOC1 ENSGALG00000014915 5846 0.974 - - - - 0.974 - - - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
70. SLC25A24 ENSGALG00000001938 3671 0.974 - - - - 0.974 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
71. LYN ENSGALG00000042321 3539 0.974 - - - - 0.974 - - - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
72. MAPKAPK2 ENSGALG00000000883 6174 0.973 - - - - 0.973 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
73. DPCD ENSGALG00000007731 7225 0.973 - - - - 0.973 - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
74. CCDC58 ENSGALG00000014413 9022 0.971 - - - - 0.971 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
75. LARP7 ENSGALG00000012048 8393 0.971 - - - - 0.971 - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
76. WWP2 ENSGALG00000000699 5040 0.97 - - - - 0.970 - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
77. C19orf70 ENSGALG00000026847 19315 0.97 - - - - 0.970 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
78. ROMO1 ENSGALG00000027416 9560 0.969 - - - - 0.969 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
79. H2AFY_1 ENSGALG00000040141 4895 0.969 - - - - 0.969 - - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
80. DAP ENSGALG00000013002 6815 0.969 - - - - 0.969 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
81. MKKS ENSGALG00000009013 9301 0.968 - - - - 0.968 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
82. GTF2H3 ENSGALG00000023682 9914 0.968 - - - - 0.968 - - - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
83. TIMM10 ENSGALG00000004845 31395 0.967 - - - - 0.967 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
84. MPRIP ENSGALG00000004798 6700 0.965 - - - - 0.965 - - - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
85. DCAF12 ENSGALG00000005800 6419 0.965 - - - - 0.965 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
86. ENSGALG00000004283 ENSGALG00000004283 4771 0.965 - - - - 0.965 - - - - -
87. CORO2B ENSGALG00000008043 2683 0.963 - - - - 0.963 - - - - - coronin 2B [Source:HGNC Symbol;Acc:HGNC:2256]
88. BRMS1L ENSGALG00000010093 4964 0.963 - - - - 0.963 - - - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
89. C1H21ORF33 ENSGALG00000019171 8910 0.963 - - - - 0.963 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
90. ALDH4A1 ENSGALG00000042184 9432 0.962 - - - - 0.962 - - - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
91. CHD4 ENSGALG00000013565 25695 0.962 - - - - 0.962 - - - - - chromodomain helicase DNA binding protein 4
92. PWP1 ENSGALG00000012631 10536 0.962 - - - - 0.962 - - - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
93. ZWILCH ENSGALG00000007736 4939 0.961 - - - - 0.961 - - - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
94. UTP3 ENSGALG00000011553 8814 0.96 - - - - 0.960 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
95. CTSL2 CTSL2 7966 0.959 - - - - 0.959 - - - - -
96. NUP188 ENSGALG00000043394 9288 0.959 - - - - 0.959 - - - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
97. COPG COPG 6949 0.958 - - - - 0.958 - - - - -
98. THUMPD3 ENSGALG00000008394 17711 0.956 - - - - 0.956 - - - - - THUMP domain containing 3, transcript variant X2
99. CYB5R2 ENSGALG00000032372 7967 0.956 - - - - 0.956 - - - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
100. GTF2B ENSGALG00000006205 6950 0.955 - - - - 0.955 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]

There are 80 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA