Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB22A

Gene Name Gene ID Reads Annotation
RAB22A ENSGALG00000007554 201 RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]











Genes with expression patterns similar to RAB22A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB22A ENSGALG00000007554 201 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
2. CEP112 ENSGALG00000034989 123 1.639 - - - - - - 0.745 - - 0.894 centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
3. CAT-1 CAT-1 115 1.637 - - - - - - 0.890 - - 0.747
4. ZFYVE16 ENSGALG00000015576 287 1.6 - - - - - - 0.856 0.744 - - zinc finger FYVE-type containing 16, transcript variant X3
5. ARHGAP25 ENSGALG00000035194 74 1.578 - - - - - - - 0.788 - 0.790 Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
6. COBL ENSGALG00000013102 84 1.439 - - - - 0.725 - - 0.714 - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
7. NPAS3 ENSGALG00000029022 1950 1.436 - - - - - - 0.729 0.707 - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
8. AFG3L2 ENSGALG00000013853 1138 0.926 - - - - - - 0.926 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
9. PTPN21 ENSGALG00000010616 129 0.924 - - - - - - 0.924 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
10. WDR35 157 0.921 - - - - - - 0.921 - - - WD repeat domain 35, transcript variant X1
11. CBLN1 ENSGALG00000042664 15 0.919 - - - - - - 0.919 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
12. FAM46C 13 0.919 - - - - - - 0.919 - - - family with sequence similarity 46 member C
13. MAP3K19 ENSGALG00000028457 17 0.919 - - - - - - 0.919 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
14. CHST9 ENSGALG00000019489 21 0.919 - - - - - - 0.919 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
15. PANX1 ENSGALG00000039751 70 0.919 - - - - - - 0.919 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
16. MBL2 ENSGALG00000002507 17 0.919 - - - - - - 0.919 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
17. CXADR ENSGALG00000015701 96 0.918 - - - - - - 0.918 - - - coxsackie virus and adenovirus receptor, transcript variant X2
18. MTOR ENSGALG00000003339 328 0.917 - - - - - - 0.917 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
19. HN1L HN1L 247 0.914 - - - - - - 0.914 - - -
20. SCTR ENSGALG00000012106 49 0.914 - - - - - - 0.914 - - - secretin receptor [Source:NCBI gene;Acc:770943]
21. ZBTB41 ENSGALG00000002305 97 0.912 - - - - - - - 0.912 - - zinc finger and BTB domain containing 41, transcript variant X2
22. EFCAB7 ENSGALG00000010998 13 0.912 - - - - - - 0.912 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
23. KIAA1244 KIAA1244 62 0.911 - - - - - - 0.911 - - -
24. SNAP23 ENSGALG00000009097 36 0.909 - - - - - - - 0.909 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
25. ADAP2 ENSGALG00000003319 134 0.907 - - - - - - 0.907 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
26. RTN4RL2 ENSGALG00000032903 809 0.907 - - - - - - - 0.907 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
27. TP73 ENSGALG00000001006 335 0.905 - - - - - - 0.905 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
28. SLC2A9 ENSGALG00000014971 751 0.904 - - - - - - 0.904 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
29. RNF170 ENSGALG00000015386 296 0.903 - - - - - - 0.903 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
30. SYT8 ENSGALG00000006602 369 0.903 - - - - - - 0.903 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
31. SLC16A14 ENSGALG00000002897 157 0.903 - - - - - - 0.903 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
32. PCDH11X ENSGALG00000006851 314 0.898 - - - - - - 0.898 - - - protocadherin 11 X-linked, transcript variant X1
33. GRID1 ENSGALG00000037366 159 0.897 - - - - - - 0.897 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
34. FOXRED1 ENSGALG00000046347 4176 0.896 - - - - - - 0.896 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
35. ASH1L ENSGALG00000014638 803 0.895 - - - - - - 0.895 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
36. PLK4 ENSGALG00000010195 514 0.894 - - - - - - 0.894 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
37. CDKN3 ENSGALG00000012220 41 0.894 - - - - - - - 0.894 - - cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]
38. FAM69A ENSGALG00000005918 157 0.89 - - - - - - 0.890 - - - family with sequence similarity 69 member A, transcript variant X4
39. LYRM1 ENSGALG00000002273 1523 0.889 - - - - - - 0.889 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
40. VWCE ENSGALG00000043089 212 0.888 - - - - - - - 0.888 - - von Willebrand factor C and EGF domains [Source:HGNC Symbol;Acc:HGNC:26487]
41. ARHGAP12 ENSGALG00000007254 479 0.887 - - - - - - 0.887 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
42. NCOA5 ENSGALG00000007009 299 0.886 - - - - - - 0.886 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
43. CCDC173 358 0.88 - - - - - - 0.880 - - - coiled-coil domain containing 173
44. SMAD3 ENSGALG00000035701 161 0.88 - - - - - - 0.880 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
45. KCNK2 ENSGALG00000009687 1552 0.88 - - - - - - 0.880 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
46. ZDHHC8 ENSGALG00000002124 35 0.879 - - - 0.879 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
47. NRIP3 ENSGALG00000005903 58 0.879 - - - - - - - 0.879 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
48. LOC769139 ENSGALG00000026754 753 0.879 - - - - - - 0.879 - - - feather keratin 1-like, transcript variant X2
49. OTUD7B ENSGALG00000013348 38 0.876 - - - 0.876 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
50. C8orf34 ENSGALG00000034561 286 0.876 - - - - - - 0.876 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
51. ZPBP2 ENSGALG00000013484 14 0.873 - - - 0.873 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
52. HTR1E ENSGALG00000015826 11 0.873 - - - 0.873 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
53. TAP1 ENSGALG00000035075 54 0.871 - - - - - - 0.871 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
54. VEPH1 ENSGALG00000009682 51 0.871 - - - 0.871 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
55. NUP160 ENSGALG00000043074 46 0.871 - - - 0.871 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
56. CP ENSGALG00000030773 119 0.87 - - - 0.870 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
57. LOC419074 ENSGALG00000017336 1885 0.869 - - - - - - 0.869 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
58. IQCH ENSGALG00000007909 128 0.868 - - - - - - 0.868 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
59. MTERFD3 MTERFD3 20 0.868 - - - 0.868 - - - - - -
60. TTC12 1384 0.866 - - - - - - 0.866 - - - tetratricopeptide repeat domain 12, transcript variant X4
61. TFB1M ENSGALG00000013647 84 0.865 - - - - - - 0.865 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
62. TRAF2 ENSGALG00000042838 24 0.865 - - - 0.865 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
63. STXBP1 ENSGALG00000040003 157 0.864 - - - - - - - 0.864 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
64. TTC38 ENSGALG00000014551 1135 0.863 - - - - - - 0.863 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
65. CYP4A22 ENSGALG00000020688 741 0.863 - - - 0.863 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
66. PIBF1 ENSGALG00000016929 593 0.863 - - - - - - 0.863 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
67. ACOX2 ENSGALG00000007132 47 0.862 - - - 0.862 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
68. RPE65 ENSGALG00000011259 51 0.861 - - - - - - 0.861 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
69. PAK2 ENSGALG00000006426 283 0.86 - - - - - - - 0.860 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
70. OXGR1 ENSGALG00000016891 13 0.86 - - - 0.860 - - - - - - oxoglutarate receptor 1
71. BEGAIN ENSGALG00000011236 35 0.859 - - - 0.859 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
72. AAGAB ENSGALG00000007887 142 0.859 - - - - - - 0.859 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
73. LOC112532477 ENSGALG00000027520 40 0.858 - - - - - - 0.858 - - - fibrinogen-like protein 1-like protein
74. ANO6 ENSGALG00000009638 470 0.857 - - - - - - 0.857 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
75. C10orf71 ENSGALG00000027353 19 0.856 - - - - - - - - - 0.856 chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
76. ENSGALG00000028652 ENSGALG00000028652 65 0.853 - - - 0.853 - - - - - -
77. RGS16 ENSGALG00000033535 139 0.852 - - - 0.852 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
78. LGI2 ENSGALG00000043283 433 0.851 - - - - - - 0.851 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
79. WSCD1 ENSGALG00000005886 539 0.851 - - - - - - 0.851 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
80. VWDE ENSGALG00000042443 160 0.85 - - - - - - 0.850 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
81. ACBD7 ENSGALG00000019663 2328 0.849 - - - - - - 0.849 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
82. TMEM65 ENSGALG00000037371 776 0.849 - - - - - - 0.849 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
83. SNX10 ENSGALG00000011046 333 0.848 - - - - - - 0.848 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
84. ENKUR ENSGALG00000007680 637 0.848 - - - - - - 0.848 - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
85. ZIC3 ENSGALG00000031144 863 0.847 - - - - - - - 0.847 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
86. MADD ENSGALG00000008181 2273 0.847 - - - - - - 0.847 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
87. RFESD ENSGALG00000014673 198 0.846 - - - 0.846 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
88. MAPT ENSGALG00000000625 659 0.846 - - - - - - - 0.846 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
89. USP42 ENSGALG00000003378 1392 0.846 - - - - - - 0.846 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
90. SMCR8 ENSGALG00000024082 44 0.845 - - - 0.845 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
91. OGDHL ENSGALG00000002266 57 0.845 - - - 0.845 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
92. gga-mir-454 ENSGALG00000033526 22 0.844 - - - 0.844 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
93. C12H3ORF19 C12H3ORF19 1278 0.843 - - - - - - 0.843 - - -
94. KITLG ENSGALG00000011206 71 0.843 - - - 0.843 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
95. NPTX2 ENSGALG00000003562 249 0.842 - - - - - - 0.842 - - - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
96. STXBP6 ENSGALG00000009847 224 0.842 - - - - - - - - - 0.842 syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
97. AADAT ENSGALG00000009655 1692 0.84 - - - - - - 0.840 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
98. PIH1D3 ENSGALG00000004870 1365 0.839 - - - - - - 0.839 - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
99. ENSGALG00000027955 ENSGALG00000027955 102 0.837 - - - - - - - 0.837 - -
100. DNAI2 ENSGALG00000004495 45 0.836 - - - - - - - 0.836 - - dynein axonemal intermediate chain 2

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA