Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB20

Gene Name Gene ID Reads Annotation
RAB20 ENSGALG00000016844 3250 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]











Genes with expression patterns similar to RAB20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB20 ENSGALG00000016844 3250 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
2. INTS10 ENSGALG00000010130 6320 2.542 - - - 0.737 - - 0.896 - - 0.909 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
3. CCDC58 ENSGALG00000014413 9022 1.878 - - - - - - 0.930 0.948 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
4. NEO1 ENSGALG00000001774 10165 1.832 - - - - - - - 0.995 - 0.837 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
5. STX2 ENSGALG00000002536 10438 1.799 - - - - - - - 0.943 - 0.856 syntaxin 2 [Source:NCBI gene;Acc:378895]
6. SNORA72 SNORA72 27695 1.773 - - - - - - 0.848 0.925 - -
7. MRPL32 ENSGALG00000037258 6861 1.765 - - - 0.781 - - - 0.984 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
8. NARS ENSGALG00000040506 9506 1.758 - - - - - - 0.871 - - 0.887 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
9. CCND1 ENSGALG00000007555 6715 1.727 - - - - - - 0.866 - - 0.861 cyclin D1 [Source:NCBI gene;Acc:396341]
10. ACVR2B ENSGALG00000006158 8692 1.714 - - - - - - 0.730 0.984 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
11. ITGA9 ENSGALG00000029378 415 1.688 - - - 0.796 - - - - - 0.892 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
12. GTF2E1 ENSGALG00000042320 7712 1.662 - - - - - - 0.890 - - 0.772 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
13. DNA2 ENSGALG00000004037 5426 1.662 - - - - - - 0.882 - - 0.780 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
14. LACTB2 ENSGALG00000038745 3460 1.652 - - - - - - 0.882 - - 0.770 lactamase beta 2 [Source:NCBI gene;Acc:420178]
15. PGD ENSGALG00000002797 15115 1.646 - - - 0.784 - - - - - 0.862 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
16. YIPF3 ENSGALG00000041037 6126 1.645 - - - - - - - 0.864 - 0.781 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
17. TP53BP2 ENSGALG00000042816 12368 1.643 - - - - - - 0.771 0.872 - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
18. PPFIA1 ENSGALG00000035774 5258 1.631 - - - 0.745 - - - - - 0.886 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
19. AP3S1 ENSGALG00000002341 12388 1.629 - - - - - - 0.812 - - 0.817 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
20. CNTRL ENSGALG00000001513 1773 1.627 - - - 0.731 - - - - - 0.896 centriolin [Source:NCBI gene;Acc:417121]
21. SF3A3 ENSGALG00000001540 9664 1.612 - - - - - - 0.843 - - 0.769 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
22. TM9SF3 ENSGALG00000005534 15290 1.611 - - - 0.711 - - 0.900 - - - transmembrane 9 superfamily member 3
23. GTF2F2 ENSGALG00000016974 7524 1.604 - - - 0.768 - - - - - 0.836 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
24. ASB9 ENSGALG00000016563 2780 1.591 - - - 0.708 - - - - - 0.883 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
25. PMM2 ENSGALG00000007326 8260 1.57 - - - - - - 0.813 - - 0.757 phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
26. PRDM4 ENSGALG00000012619 876 1.565 - - - 0.800 - - - - - 0.765 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
27. KCNK5 ENSGALG00000034077 3233 1.548 - - - 0.756 - - - - - 0.792 potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
28. RTN4IP1 ENSGALG00000015343 4366 1.537 - - - 0.706 - - 0.831 - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
29. PSMC2 ENSGALG00000008236 25980 1.527 - - - - - - 0.769 - - 0.758 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
30. SMC5 ENSGALG00000015118 1799 1.526 - - - 0.728 - - - - - 0.798 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
31. BTG1L ENSGALG00000004676 2293 1.506 - - - 0.780 - - - - - 0.726 protein BTG1-like
32. MRPS30 ENSGALG00000014874 3416 1.497 - - - 0.775 - - - - - 0.722 mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
33. USMG5 ENSGALG00000034645 33263 1.432 - - - - - - - 0.707 - 0.725 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
34. RAC2 ENSGALG00000012456 987 0.997 - - - - - - - 0.997 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
35. CNPY3 ENSGALG00000028471 1413 0.996 - - - - - - - 0.996 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
36. TMEM200C ENSGALG00000030210 1434 0.996 - - - - - - - 0.996 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
37. CCDC15 1759 0.995 - - - - - - - 0.995 - - coiled-coil domain containing 15
38. PIGB ENSGALG00000037734 2193 0.995 - - - - - - - 0.995 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
39. FAXDC2 ENSGALG00000003972 172 0.994 - - - - - - - 0.994 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
40. DIMT1 ENSGALG00000020569 5150 0.994 - - - - - - - 0.994 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
41. ENSGALG00000002852 ENSGALG00000002852 2687 0.994 - - - - - - - 0.994 - -
42. ENSGALG00000006278 ENSGALG00000006278 202 0.994 - - - - - - - 0.994 - -
43. TNNI1 ENSGALG00000000313 4069 0.994 - - - - - - - 0.994 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
44. KIF1A ENSGALG00000006221 1989 0.994 - - - - - - - 0.994 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
45. EFR3B ENSGALG00000016605 234 0.994 - - - - - - - 0.994 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
46. ARHGEF18 ENSGALG00000003572 224 0.994 - - - - - - - 0.994 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
47. SYNM ENSGALG00000007048 705 0.994 - - - - - - - 0.994 - - synemin [Source:NCBI gene;Acc:395599]
48. MIEN1 ENSGALG00000026328 3396 0.993 - - - - - - - 0.993 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
49. FSBP 3152 0.993 - - - - - - - 0.993 - - fibrinogen silencer binding protein
50. KCNK2 ENSGALG00000009687 1552 0.993 - - - - - - - 0.993 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
51. ADAMTS6 ENSGALG00000014751 1293 0.992 - - - - - - - 0.992 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
52. SIRT6 ENSGALG00000001245 3716 0.992 - - - - - - - 0.992 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
53. RAD52 ENSGALG00000039171 6989 0.992 - - - - - - - 0.992 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
54. TEX10 ENSGALG00000013438 3121 0.992 - - - - - - - 0.992 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
55. PRDM6 ENSGALG00000005351 2078 0.991 - - - - - - - 0.991 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
56. DEPDC1B ENSGALG00000014729 5334 0.991 - - - - - - - 0.991 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
57. SFXN1 ENSGALG00000033956 2713 0.99 - - - - - - - 0.990 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
58. DAB2 ENSGALG00000003803 6143 0.988 - - - - - - - 0.988 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
59. DCK ENSGALG00000028501 8675 0.988 - - - - - - - 0.988 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
60. HPS4 ENSGALG00000005595 2217 0.988 - - - - - - - 0.988 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
61. SULF1 ENSGALG00000039553 5115 0.987 - - - - - - - 0.987 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
62. ZCCHC10 ENSGALG00000036666 5148 0.986 - - - - - - - 0.986 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
63. AVENAII AVENAII 4552 0.985 - - - - - - - 0.985 - -
64. TMEM26 ENSGALG00000025862 2222 0.985 - - - - - - - 0.985 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
65. TMEM60 ENSGALG00000008330 6303 0.984 - - - - - - - 0.984 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
66. MYO9A ENSGALG00000033618 4505 0.984 - - - - - - - 0.984 - - myosin IXA, transcript variant X10
67. ATP11B ENSGALG00000008839 3455 0.984 - - - - - - - 0.984 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
68. SPR ENSGALG00000000067 3456 0.984 - - - - - - - 0.984 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
69. IVD ENSGALG00000040267 5820 0.983 - - - - - - - 0.983 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
70. MTFR2 ENSGALG00000019967 4436 0.983 - - - - - - - 0.983 - - mitochondrial fission regulator 2, transcript variant X1
71. CDKAL1 ENSGALG00000012677 4733 0.982 - - - - - - - 0.982 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
72. BLCAP ENSGALG00000027126 12200 0.979 - - - - - - - 0.979 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
73. NKIRAS2 ENSGALG00000028971 3414 0.979 - - - - - - - 0.979 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
74. TTC37 ENSGALG00000014670 5715 0.978 - - - - - - - 0.978 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
75. ARPC4 ENSGALG00000006691 33311 0.973 - - - - - - 0.973 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
76. COPS8 ENSGALG00000033385 10166 0.971 - - - - - - - 0.971 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
77. BEND5 ENSGALG00000010505 3298 0.969 - - - - - - - 0.969 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
78. LRRC59 ENSGALG00000007673 2081 0.966 - - - - - - - 0.966 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
79. GNL2 ENSGALG00000001973 10148 0.965 - - - - - - - 0.965 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
80. AP5Z1 ENSGALG00000040528 4302 0.961 - - - - - - - 0.961 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
81. EVPL ENSGALG00000002108 591 0.959 - - - - - - - 0.959 - - envoplakin
82. YIPF1 5945 0.958 - - - - - - - 0.958 - - Yip1 domain family member 1, transcript variant 4
83. NDUFB4 ENSGALG00000027688 8951 0.957 - - - - - - - 0.957 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
84. CCDC104 CCDC104 6584 0.956 - - - - - - - 0.956 - -
85. PREP ENSGALG00000015405 17050 0.954 - - - - - - - 0.954 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
86. GATC ENSGALG00000007195 8610 0.953 - - - - - - - 0.953 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
87. KLHL18 ENSGALG00000005582 3053 0.951 - - - - - - - 0.951 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
88. SNRPA1 ENSGALG00000007170 17764 0.945 - - - - - - - 0.945 - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
89. DNAJC15 ENSGALG00000016965 9163 0.944 - - - - - - 0.944 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
90. FGD3 ENSGALG00000005237 4410 0.943 - - - - - - 0.943 - - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
91. CHMP7 ENSGALG00000000409 8967 0.938 - - - - - - 0.938 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
92. MFGE8 ENSGALG00000006702 6976 0.937 - - - - - - 0.937 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
93. PRCP ENSGALG00000037521 4012 0.937 - - - - - - 0.937 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
94. SLC25A14 ENSGALG00000004063 5574 0.934 - - - - - - 0.934 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
95. TM9SF2L ENSGALG00000006487 5566 0.933 - - - - - - - 0.933 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
96. ALDH4A1 ENSGALG00000042184 9432 0.933 - - - - - - 0.933 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
97. NCOA4 ENSGALG00000002066 10544 0.931 - - - - - - 0.931 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
98. ASAP2 ENSGALG00000016419 1393 0.929 - - - - - - - - - 0.929 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
99. POLA1 ENSGALG00000016312 9440 0.929 - - - - - - 0.929 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
100. MYH1D ENSGALG00000027323 365 0.925 - - - - - - - - - 0.925 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]

There are 767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA