Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB18

Gene Name Gene ID Reads Annotation
RAB18 ENSGALG00000007435 3589 RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]











Genes with expression patterns similar to RAB18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB18 ENSGALG00000007435 3589 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
2. SF3B3 ENSGALG00000002531 19397 1.639 - - - - - - 0.809 0.830 - - splicing factor 3b subunit 3, transcript variant X2
3. SASS6 ENSGALG00000005302 4029 1.547 - - - - - - 0.757 0.790 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
4. CHRAC1 ENSGALG00000040823 5695 1.525 - - - - - - 0.727 0.798 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
5. NDUFA12 ENSGALG00000011325 19807 1.524 - - - - - - 0.740 0.784 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
6. BLMH ENSGALG00000004259 36907 1.516 - - - - - - 0.728 0.788 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
7. TM4SF18 4553 1.513 - - - - - - 0.797 0.716 - - transmembrane 4 L six family member 18, transcript variant X2
8. SPCS1 ENSGALG00000001655 7718 1.512 - - - - - - 0.802 0.710 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
9. STRN3 ENSGALG00000040464 9045 1.509 - - - - - - 0.729 0.780 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
10. FAM177A1 ENSGALG00000010046 4318 1.498 - - - - - - 0.793 0.705 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
11. DNAJA4 ENSGALG00000036850 6847 1.495 - - - - - - 0.711 0.784 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
12. ADI1 ENSGALG00000025796 8636 1.489 - - - - - - 0.701 0.788 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
13. INTS12 ENSGALG00000010575 2976 1.484 - - - - - - 0.754 0.730 - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
14. COBRA1 COBRA1 4600 1.481 - - - - - - 0.769 0.712 - -
15. DCTD ENSGALG00000010674 8396 1.476 - - - - - - 0.706 0.770 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
16. ERCC3 ENSGALG00000011515 3133 1.47 - - - - - - 0.739 0.731 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
17. PCTP ENSGALG00000003099 5851 1.467 - - - - - - 0.709 0.758 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
18. QTRTD1 QTRTD1 10765 1.465 - - - - - - 0.738 0.727 - -
19. PAPSS1 ENSGALG00000010542 5631 1.443 - - - - - - 0.711 0.732 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
20. GPR107 ENSGALG00000004052 3392 1.443 - - - - - - 0.702 0.741 - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
21. DSCC1 ENSGALG00000043799 2436 1.442 - - - - - - 0.713 0.729 - - DNA replication and sister chromatid cohesion 1 [Source:HGNC Symbol;Acc:HGNC:24453]
22. SRBD1 ENSGALG00000009990 4568 1.431 - - - - - - 0.723 0.708 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
23. R3HDM1 ENSGALG00000012246 6580 1.427 - - - - - - 0.715 0.712 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
24. RRP36 ENSGALG00000028056 7560 1.422 - - - - - - 0.712 0.710 - - ribosomal RNA processing 36
25. ZFYVE9 ENSGALG00000010613 2421 1.418 - - - - - - 0.716 0.702 - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
26. ACTR8 ENSGALG00000005385 3647 1.416 - - - - - - 0.712 0.704 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
27. MRPS30 ENSGALG00000014874 3416 0.853 - - - - - - 0.853 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
28. NOC4L ENSGALG00000002272 9644 0.851 - - - - - - 0.851 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
29. ZMYM3 ENSGALG00000005533 2927 0.85 - - - - - - 0.850 - - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
30. TAX1BP1 ENSGALG00000042822 7728 0.849 - - - - - - 0.849 - - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
31. HERC2 ENSGALG00000016739 9900 0.845 - - - - - - 0.845 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
32. KLHDC4 ENSGALG00000037315 9828 0.843 - - - - - - 0.843 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
33. CASK ENSGALG00000042400 8485 0.841 - - - - - - 0.841 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
34. BRMS1L ENSGALG00000010093 4964 0.84 - - - - - - 0.840 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
35. TCTN3 ENSGALG00000010517 3985 0.836 - - - - - - 0.836 - - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
36. COMMD4 ENSGALG00000001572 31664 0.833 - - - - - - 0.833 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
37. TBP ENSGALG00000011171 5759 0.829 - - - - - - - 0.829 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
38. EMG1 ENSGALG00000014568 8102 0.827 - - - - - - 0.827 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
39. NDUFV2 ENSGALG00000036625 29234 0.826 - - - - - - 0.826 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
40. VBP1 VBP1 14482 0.826 - - - - - - 0.826 - - -
41. ATG3 ENSGALG00000015204 11277 0.825 - - - - - - 0.825 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
42. ANLN 10479 0.825 - - - - - - - 0.825 - - anillin actin binding protein, transcript variant X2
43. PSMC3 ENSGALG00000008108 22922 0.824 - - - - - - 0.824 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
44. WDR43 ENSGALG00000032529 12235 0.822 - - - - - - 0.822 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
45. CDC45 ENSGALG00000001616 8432 0.82 - - - - - - 0.820 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
46. URI1 ENSGALG00000004506 6024 0.818 - - - - - - 0.818 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
47. MTA3 ENSGALG00000009925 1914 0.814 - - - - - - - 0.814 - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
48. LSM5 ENSGALG00000041625 22307 0.81 - - - - - - 0.810 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
49. SETD3 ENSGALG00000034802 4125 0.81 - - - - - - - 0.810 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
50. TRIP13 ENSGALG00000033834 6590 0.809 - - - - - - 0.809 - - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
51. ATR ENSGALG00000002663 4626 0.809 - - - - - - 0.809 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
52. TMEM14A ENSGALG00000019894 5279 0.808 - - - - - - - 0.808 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
53. ACP1 ENSGALG00000016363 10636 0.807 - - - - - - - 0.807 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
54. TBL3 ENSGALG00000005558 8363 0.807 - - - - - - - 0.807 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
55. MRPL37 ENSGALG00000010761 10596 0.807 - - - - - - 0.807 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
56. MSH6 ENSGALG00000008957 6396 0.806 - - - - - - - 0.806 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
57. ENSGALG00000008755 ENSGALG00000008755 3523 0.805 - - - - - - 0.805 - - -
58. PDDC1 5179 0.804 - - - - - - 0.804 - - - Parkinson disease 7 domain containing 1, transcript variant X6
59. COX11 ENSGALG00000027190 4475 0.804 - - - - - - - 0.804 - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
60. TXNDC17 ENSGALG00000027950 45004 0.802 - - - - - - 0.802 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
61. NEK6 ENSGALG00000001118 20333 0.802 - - - - - - 0.802 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
62. SPEN ENSGALG00000036932 9688 0.802 - - - - - - 0.802 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
63. NAF1 ENSGALG00000009496 2003 0.801 - - - - - - - 0.801 - - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
64. RANBP1 ENSGALG00000002107 17715 0.801 - - - - - - 0.801 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
65. BPGM ENSGALG00000013069 4520 0.8 - - - - - - - 0.800 - - bisphosphoglycerate mutase [Source:NCBI gene;Acc:418172]
66. EHD3 ENSGALG00000009086 14407 0.8 - - - - - - 0.800 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
67. PSMB3 ENSGALG00000001597 22588 0.799 - - - - - - - 0.799 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
68. FADS1 ENSGALG00000007127 5231 0.798 - - - - - - - 0.798 - - fatty acid desaturase 1
69. SLC25A13 ENSGALG00000009728 8858 0.797 - - - - - - 0.797 - - - solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
70. HMGB3 ENSGALG00000009071 12011 0.796 - - - - - - - 0.796 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
71. NUBPL ENSGALG00000009983 3328 0.796 - - - - - - - 0.796 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
72. NUPL1 NUPL1 8197 0.796 - - - - - - 0.796 - - -
73. INCENP ENSGALG00000007537 16617 0.796 - - - - - - 0.796 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
74. KIAA1671 ENSGALG00000005512 2540 0.795 - - - - - - 0.795 - - - KIAA1671 [Source:NCBI gene;Acc:768701]
75. RPF2 ENSGALG00000037087 12788 0.794 - - - - - - 0.794 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
76. CPOX ENSGALG00000015240 5292 0.794 - - - - - - - 0.794 - - coproporphyrinogen oxidase
77. GLRX3 ENSGALG00000010464 22578 0.794 - - - - - - 0.794 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
78. C11H16ORF80 C11H16ORF80 18673 0.793 - - - - - - - 0.793 - -
79. TLK2 ENSGALG00000000410 4690 0.793 - - - - - - 0.793 - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
80. SMARCA1 ENSGALG00000008431 4000 0.792 - - - - - - 0.792 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
81. SAR1B ENSGALG00000038753 6493 0.791 - - - - - - 0.791 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
82. TPRKB ENSGALG00000013018 8687 0.791 - - - - - - 0.791 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
83. ARG2 ENSGALG00000009519 19523 0.791 - - - - - - - 0.791 - - arginase 2 [Source:NCBI gene;Acc:423272]
84. TTC3 ENSGALG00000016050 4115 0.791 - - - - - - 0.791 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
85. TSTD1 TSTD1 3613 0.79 - - - - - - - 0.790 - -
86. MZT1 ENSGALG00000016932 9269 0.789 - - - - - - 0.789 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
87. ENSGALG00000005615 ENSGALG00000005615 4354 0.789 - - - - - - 0.789 - - -
88. C4orf27 C4orf27 16724 0.788 - - - - - - - 0.788 - -
89. gga-mir-1778 ENSGALG00000025181 8765 0.788 - - - - - - 0.788 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
90. ANAPC16 ENSGALG00000004410 18001 0.787 - - - - - - - 0.787 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
91. ELMOD1 ENSGALG00000017169 2303 0.787 - - - - - - - 0.787 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
92. LIMD2 ENSGALG00000000529 30617 0.787 - - - - - - 0.787 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
93. EMC3 ENSGALG00000003738 10363 0.787 - - - - - - - 0.787 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
94. SPG21 ENSGALG00000007262 8050 0.786 - - - - - - 0.786 - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
95. TMEM70 ENSGALG00000033568 10720 0.785 - - - - - - 0.785 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
96. NUP85 ENSGALG00000007974 21249 0.785 - - - - - - - 0.785 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
97. VPS33A ENSGALG00000004440 2030 0.785 - - - - - - - 0.785 - - VPS33A, CORVET/HOPS core subunit, transcript variant X1
98. PLRG1 ENSGALG00000009257 8613 0.785 - - - - - - 0.785 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
99. TMEM167A ENSGALG00000027332 13862 0.784 - - - - - - 0.784 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
100. ARPC2 ENSGALG00000011452 7338 0.783 - - - - - - 0.783 - - - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]

There are 470 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA