Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB13

Gene Name Gene ID Reads Annotation
RAB13 RAB13 22











Genes with expression patterns similar to RAB13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB13 RAB13 22 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000
2. GRIA4 ENSGALG00000038995 29 1.704 - - 0.781 - - - - 0.923 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
3. GRAMD2 GRAMD2 3 1 - - 1.000 - - - - - - -
4. ANKFN1 ENSGALG00000003105 15 1 - - - - - - - 1.000 - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
5. CAMK4L ENSGALG00000015203 5 1 - - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
6. TMEM240 ENSGALG00000035387 14 1 - - 1.000 - - - - - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
7. FAM105A ENSGALG00000012965 6 1 - - 1.000 - - - - - - - family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
8. SERPING1 ENSGALG00000007381 144 1 - - 1.000 - - - - - - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
9. ENSGALG00000022694 ENSGALG00000022694 1 1 - - 1.000 - - - - - - -
10. HOXD12 ENSGALG00000009274 637 1 - - 1.000 - - - - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
11. KMO ENSGALG00000007503 7 1 - - 1.000 - - - - - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
12. ENSGALG00000006384 ENSGALG00000006384 3 1 - - 1.000 - - - - - - -
13. ENSGALG00000025610 ENSGALG00000025610 0 1 - - 1.000 - - - - - - -
14. TUB ENSGALG00000005986 85 1 - - - - - - - 1.000 - - tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
15. SHISA6 ENSGALG00000034516 0 1 - - 1.000 - - - - - - - shisa family member 6 [Source:HGNC Symbol;Acc:HGNC:34491]
16. EBF1 ENSGALG00000003699 23 1 - - 1.000 - - - - - - - early B-cell factor 1 [Source:NCBI gene;Acc:395512]
17. DDX11 49 1 - - - - - - - 1.000 - - DEAD/H-box helicase 11, transcript variant X1
18. C21orf62 ENSGALG00000040059 5 1 - - 1.000 - - - - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
19. AMMECR1 ENSGALG00000008074 5 1 - - 1.000 - - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
20. LMX1B ENSGALG00000040582 34 1 - - - - - - - 1.000 - - LIM homeobox transcription factor 1 beta [Source:NCBI gene;Acc:396312]
21. PLA2G1BL ENSGALG00000007236 4 1 - - 1.000 - - - - - - - phospholipase A2, major isoenzyme-like
22. GPCPD1 ENSGALG00000009130 24 0.98 - - - - - - - 0.980 - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
23. CATHL1 ENSGALG00000027973 98 0.98 - - - - - - - 0.980 - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
24. BAI3 BAI3 106 0.98 - - - - - - - 0.980 - -
25. SORL1 ENSGALG00000006598 39 0.98 - - - - - - - 0.980 - - sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
26. STRADB ENSGALG00000008373 10 0.98 - - - - - - - 0.980 - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
27. SASH1 ENSGALG00000012342 28 0.98 - - - - - - - 0.980 - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
28. DRG11 DRG11 32 0.98 - - - - - - - 0.980 - -
29. STK38 ENSGALG00000000523 44 0.98 - - - - - - - 0.980 - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
30. PLCE1 ENSGALG00000039528 151 0.956 - - - - - - - 0.956 - - phospholipase C epsilon 1
31. MYRFL ENSGALG00000019352 2 0.923 - - - - - - - 0.923 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
32. GAL4 GAL4 2 0.923 - - - - - - - 0.923 - -
33. SVOPL ENSGALG00000012812 27 0.923 - - - - - - - 0.923 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
34. CCR5 ENSGALG00000037077 23 0.923 - - - - - - - 0.923 - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
35. FAM166A ENSGALG00000045172 0 0.923 - - - - - - - 0.923 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
36. MCAM ENSGALG00000030027 26 0.923 - - - - - - - 0.923 - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
37. SLC44A1 ENSGALG00000015439 32 0.923 - - - - - - - 0.923 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
38. OVCH2 ENSGALG00000005318 8 0.923 - - - - - - - 0.923 - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
39. REEP1 ENSGALG00000015786 7 0.923 - - - - - - - 0.923 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
40. C8orf37 ENSGALG00000038971 5 0.923 - - - - - - - 0.923 - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
41. HHAT ENSGALG00000009881 7 0.923 - - - - - - - 0.923 - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
42. ATP6V1H ENSGALG00000013621 13 0.923 - - - - - - - 0.923 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
43. ENSGALG00000005026 ENSGALG00000005026 9 0.923 - - - - - - - 0.923 - -
44. ENSGALG00000026578 ENSGALG00000026578 4 0.923 - - - - - - - 0.923 - -
45. CAMK2A ENSGALG00000005621 3 0.923 - - - - - - - 0.923 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
46. PREX1 ENSGALG00000004621 48 0.923 - - - - - - - 0.923 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
47. gga-mir-99a ENSGALG00000018242 192 0.923 - - - - - - - 0.923 - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
48. IL2RB ENSGALG00000012472 7 0.923 - - - - - - - 0.923 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
49. SLC10A4 ENSGALG00000033908 300 0.923 - - - - - - - 0.923 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
50. ST3GAL2 ENSGALG00000002651 20 0.923 - - - - - - - 0.923 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
51. HMGCS2 ENSGALG00000002960 54 0.923 - - - - - - - 0.923 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
52. PROZ ENSGALG00000016832 6 0.923 - - - - - - - 0.923 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
53. SLCO2A1 ENSGALG00000006471 18 0.923 - - - - - - - 0.923 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
54. LZTS2 ENSGALG00000023612 9 0.923 - - - - - - - 0.923 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
55. HOPX ENSGALG00000011404 10 0.923 - - - - - - - 0.923 - - HOP homeobox [Source:NCBI gene;Acc:395241]
56. MIS18A ENSGALG00000015884 25 0.923 - - - - - - - 0.923 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
57. HPDL ENSGALG00000023348 1 0.923 - - - - - - - 0.923 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
58. PLCH2 ENSGALG00000001207 7 0.923 - - - - - - - 0.923 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
59. SLC1A2 ENSGALG00000037556 22 0.923 - - - - - - - 0.923 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
60. HERPUD1 ENSGALG00000001220 18 0.923 - - - - - - - 0.923 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
61. TVB TVB 11 0.923 - - - - - - - 0.923 - -
62. ANKFY1 ENSGALG00000001467 21 0.923 - - - - - - - 0.923 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
63. ANKRD42 8 0.923 - - - - - - - 0.923 - - ankyrin repeat domain 42
64. ENSGALG00000024369 ENSGALG00000024369 4 0.923 - - - - - - - 0.923 - -
65. GSTT1 ENSGALG00000006344 22 0.923 - - - - - - - 0.923 - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
66. ITM2B ENSGALG00000016996 1112 0.923 - - - - - - - 0.923 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
67. NR4A3 ENSGALG00000013568 1 0.923 - - - - - - - 0.923 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
68. VSNL1 ENSGALG00000016464 19 0.923 - - - - - - - 0.923 - - visinin like 1 [Source:NCBI gene;Acc:396189]
69. UTS2 ENSGALG00000000556 0 0.923 - - - - - - - 0.923 - - urotensin 2 [Source:NCBI gene;Acc:404535]
70. SPAG8 2 0.923 - - - - - - - 0.923 - - sperm associated antigen 8, transcript variant X3
71. CR1L ENSGALG00000023950 98 0.923 - - - - - - - 0.923 - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
72. GTF2E1L ENSGALG00000013600 4 0.923 - - - - - - - 0.923 - - general transcription factor IIE subunit 1-like
73. DYDC1 ENSGALG00000002432 54 0.923 - - - - - - - 0.923 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
74. SOS2 ENSGALG00000012273 41 0.923 - - - - - - - 0.923 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
75. TM6SF2 ENSGALG00000029015 109 0.923 - - - - - - - 0.923 - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
76. LRRC3B ENSGALG00000011314 26 0.906 - - - - - - - 0.906 - - leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
77. ENSGALG00000005445 ENSGALG00000005445 16 0.863 - - - - - - - 0.863 - -
78. HDAC10 ENSGALG00000041251 57 0.855 - - - - - - - 0.855 - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
79. NTRK2 ENSGALG00000012594 24 0.855 - - - - - - - 0.855 - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
80. SK2 SK2 74 0.843 - - - - - - - 0.843 - -
81. HOXD11 ENSGALG00000039629 658 0.836 - - - - - - - 0.836 - - homeobox D11 [Source:NCBI gene;Acc:395328]
82. ATXN3 ENSGALG00000010766 48 0.829 - - - - - - - - - 0.829 ataxin 3 [Source:NCBI gene;Acc:378424]
83. KLHL30 ENSGALG00000006260 32 0.825 - - - - - - - - - 0.825 kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
84. RAB11FIP1 41 0.814 - - - - - - - - - 0.814 RAB11 family interacting protein 1, transcript variant X2
85. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 0.808 - - - - - - - 0.808 - - synaptojanin 2 binding protein, transcript variant X2
86. PWP2 60 0.798 - - - - - - - 0.798 - - PWP2, small subunit processome component
87. NPRL2 ENSGALG00000002131 7 0.798 - - - - - 0.798 - - - - NPR2-like, GATOR1 complex subunit [Source:NCBI gene;Acc:425132]
88. IRX6 ENSGALG00000023738 2 0.789 - - 0.789 - - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
89. SPRTN ENSGALG00000011065 24 0.788 - - - - - - - 0.788 - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
90. CPN2 ENSGALG00000045776 18 0.781 - - 0.781 - - - - - - - carboxypeptidase N subunit 2
91. COL24A1 ENSGALG00000006864 161 0.78 - - - - - - - 0.780 - - collagen type XXIV alpha 1 chain, transcript variant X4
92. gga-mir-1725 gga-mir-1725 178 0.776 - - - - - - - 0.776 - -
93. CARD11 ENSGALG00000004398 58 0.772 - - - - 0.772 - - - - - caspase recruitment domain family member 11 [Source:NCBI gene;Acc:416476]
94. LACE1 LACE1 74 0.771 - - - - - - - 0.771 - -
95. RFXAP ENSGALG00000019087 37 0.771 - - - - - - - 0.771 - - regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
96. DVL3 ENSGALG00000008414 38 0.769 - - - 0.769 - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
97. RASAL2 ENSGALG00000004323 55 0.769 - - - - - - - 0.769 - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
98. MDM4 ENSGALG00000000636 91 0.764 - - - - - - - - - 0.764 MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
99. CORO7 ENSGALG00000038325 580 0.763 - - - - 0.763 - - - - - coronin 7 [Source:NCBI gene;Acc:416670]
100. MMR1L4 ENSGALG00000028304 81 0.76 - - - - - 0.760 - - - - Gallus gallus macrophage mannose receptor 1-like 4 (MMR1L4), mRNA. [Source:RefSeq mRNA;Acc:NM_001319013]

There are 56 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA