Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RAB12

Gene Name Gene ID Reads Annotation
RAB12 ENSGALG00000033608 14160 RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]











Genes with expression patterns similar to RAB12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB12 ENSGALG00000033608 14160 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
2. DHFR ENSGALG00000026757 18478 1.882 - - - - 0.893 - 0.989 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
3. RAP1B ENSGALG00000009927 26562 1.874 - - - - 0.882 - 0.992 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
4. TRAPPC12 ENSGALG00000016387 2593 1.813 - - - - 0.958 - - - - 0.855 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
5. SIRT1 ENSGALG00000002761 9028 1.739 - - - - 0.957 - - 0.782 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
6. WDR82 ENSGALG00000025904 4783 1.704 - - - - 0.954 - - - - 0.750 WD repeat domain 82 [Source:NCBI gene;Acc:415942]
7. PTTG1 17936 1.68 - - - - 0.954 - - 0.726 - - pituitary tumor-transforming 1, transcript variant X1
8. POLR2B ENSGALG00000011387 4864 1.673 - - - - 0.945 - - - - 0.728 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
9. ATP5A1 ATP5A1 32367 1.514 - - - - 0.801 - - 0.713 - -
10. MOB3A ENSGALG00000031729 9690 1.501 - - - - - - - 0.726 - 0.775 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
11. USP10 ENSGALG00000005674 7768 1.487 - - - - 0.765 - - - - 0.722 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
12. BRT-1 BRT-1 26083 1.432 - - - - - - - 0.703 - 0.729
13. HDAC8 ENSGALG00000004825 12066 0.998 - - - - - - 0.998 - - - histone deacetylase 8, transcript variant X2
14. MATR3 ENSGALG00000002478 12793 0.997 - - - - - - 0.997 - - - matrin 3 [Source:NCBI gene;Acc:373948]
15. Sep-06 Sep-06 5961 0.997 - - - - - - 0.997 - - -
16. FAM192A ENSGALG00000021473 10213 0.997 - - - - - - 0.997 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
17. FAT1 ENSGALG00000013579 6030 0.997 - - - - - - 0.997 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
18. MCM3 ENSGALG00000016676 16934 0.997 - - - - - - 0.997 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
19. CCNYL1 ENSGALG00000008485 11958 0.997 - - - - - - 0.997 - - - cyclin Y like 1
20. ARHGAP32 ENSGALG00000043511 7916 0.997 - - - - - - 0.997 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
21. ZEB1 ENSGALG00000007260 9277 0.997 - - - - - - 0.997 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
22. CORO1C ENSGALG00000004901 7055 0.996 - - - - - - 0.996 - - - coronin 1C [Source:NCBI gene;Acc:416893]
23. DAPK3 ENSGALG00000037733 6215 0.996 - - - - - - 0.996 - - - death-associated protein kinase 3, transcript variant X2
24. WDHD1 ENSGALG00000012199 3570 0.996 - - - - - - 0.996 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
25. EFTUD2 ENSGALG00000000988 17913 0.996 - - - - - - 0.996 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
26. C9orf64 ENSGALG00000012589 6097 0.996 - - - - - - 0.996 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
27. CNOT6 ENSGALG00000034316 10496 0.996 - - - - - - 0.996 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
28. CXCL12 ENSGALG00000041346 4128 0.996 - - - - - - 0.996 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
29. RNF141 ENSGALG00000029586 4962 0.996 - - - - - - 0.996 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
30. USPL1 ENSGALG00000017079 6263 0.996 - - - - - - 0.996 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
31. EIF3D ENSGALG00000012529 40887 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
32. EIF1B ENSGALG00000038646 9508 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
33. TMEM18 ENSGALG00000028744 11779 0.996 - - - - - - 0.996 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
34. GPC1 ENSGALG00000040316 13364 0.996 - - - - - - 0.996 - - - glypican 1 [Source:NCBI gene;Acc:424770]
35. LRPAP1 ENSGALG00000015612 3526 0.995 - - - - - - 0.995 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
36. CTBPL ENSGALG00000007642 14238 0.995 - - - - - - 0.995 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
37. VSX1 ENSGALG00000037576 1517 0.995 - - - - - - 0.995 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
38. SLC9A3R1 ENSGALG00000007650 13053 0.994 - - - - - - 0.994 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
39. IFT20 ENSGALG00000005707 23973 0.992 - - - - - - 0.992 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
40. DNAJC7 ENSGALG00000042796 14597 0.992 - - - - - - 0.992 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
41. MCM6 ENSGALG00000012348 12523 0.992 - - - - - - 0.992 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
42. C15H12ORF49 C15H12ORF49 13250 0.991 - - - - - - 0.991 - - -
43. INTS4 ENSGALG00000000091 5965 0.991 - - - - - - 0.991 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
44. UBE2L3 ENSGALG00000036739 21401 0.989 - - - - - - 0.989 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
45. LRPPRC ENSGALG00000009967 17091 0.989 - - - - - - 0.989 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
46. HNRNPH3 ENSGALG00000003947 28724 0.984 - - - - - - 0.984 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
47. PPIG ENSGALG00000009839 24114 0.983 - - - - - - 0.983 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
48. ZNF644 ENSGALG00000034253 28348 0.983 - - - - - - 0.983 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
49. CDCA4 ENSGALG00000011692 10381 0.983 - - - - - - 0.983 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
50. PDLIM4 ENSGALG00000039872 7823 0.982 - - - - - - 0.982 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
51. SMARCE1 ENSGALG00000003882 49063 0.981 - - - - - - 0.981 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
52. POLR3F ENSGALG00000008749 5645 0.968 - - - - 0.968 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
53. YY1 ENSGALG00000017388 1933 0.968 - - - - 0.968 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
54. GPN3 ENSGALG00000003807 6320 0.967 - - - - 0.967 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
55. PLAA ENSGALG00000001782 5459 0.964 - - - - 0.964 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
56. CDC42SE2 ENSGALG00000027258 4725 0.962 - - - - 0.962 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
57. AATF ENSGALG00000005420 6501 0.962 - - - - 0.962 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
58. HNRNPM ENSGALG00000000377 40684 0.961 - - - - - - 0.961 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
59. MKI67 ENSGALG00000025996 28136 0.96 - - - - 0.960 - - - - - marker of proliferation Ki-67, transcript variant X3
60. DDX55 ENSGALG00000003298 2315 0.959 - - - - 0.959 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
61. DNAJC12 ENSGALG00000002769 1418 0.959 - - - - 0.959 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
62. LATS2 4776 0.958 - - - - 0.958 - - - - - large tumor suppressor kinase 2
63. REST 2394 0.958 - - - - 0.958 - - - - - RE1 silencing transcription factor
64. IGF1R ENSGALG00000040651 772 0.958 - - - - 0.958 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
65. FH ENSGALG00000013165 13669 0.958 - - - - 0.958 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
66. XPO7 ENSGALG00000001838 1875 0.958 - - - - 0.958 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
67. ZBTB10 ENSGALG00000034376 3271 0.958 - - - - 0.958 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
68. CTSZ ENSGALG00000007462 630 0.958 - - - - 0.958 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
69. ELL2 ENSGALG00000014678 1111 0.958 - - - - 0.958 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
70. SSPN ENSGALG00000014042 638 0.957 - - - - 0.957 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
71. SH2D3C ENSGALG00000005036 5101 0.957 - - - - 0.957 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
72. ENSGALG00000011687 ENSGALG00000011687 4553 0.957 - - - - 0.957 - - - - -
73. EAPP ENSGALG00000010007 5080 0.956 - - - - 0.956 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
74. CZH9ORF41 CZH9ORF41 3492 0.955 - - - - 0.955 - - - - -
75. COIL ENSGALG00000003158 7806 0.955 - - - - 0.955 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
76. SSR2 ENSGALG00000000764 32190 0.955 - - - - 0.955 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
77. CSNK1G1 ENSGALG00000030812 31618 0.954 - - - - 0.954 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
78. CBWD1 ENSGALG00000010147 2765 0.954 - - - - 0.954 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
79. MRPS27 ENSGALG00000015002 6541 0.954 - - - - 0.954 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
80. RABEP1 ENSGALG00000001737 2650 0.954 - - - - 0.954 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
81. TLCD1 ENSGALG00000003973 17569 0.953 - - - - 0.953 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
82. DRAXIN ENSGALG00000004631 3122 0.953 - - - - 0.953 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
83. SHROOM2 ENSGALG00000030802 4517 0.952 - - - - 0.952 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
84. REEP5 ENSGALG00000023157 6282 0.952 - - - - 0.952 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
85. TCP11L1 ENSGALG00000011688 2427 0.952 - - - - 0.952 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
86. FBXO9 ENSGALG00000016320 9600 0.952 - - - - 0.952 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
87. KNOP1 ENSGALG00000002042 6251 0.952 - - - - 0.952 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
88. PUM1 ENSGALG00000042598 9392 0.951 - - - - 0.951 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
89. ATG5 ENSGALG00000015387 7752 0.951 - - - - 0.951 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
90. SAR1B ENSGALG00000038753 6493 0.951 - - - - 0.951 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
91. IGBP1 ENSGALG00000044628 9200 0.951 - - - - 0.951 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
92. COMMD8 ENSGALG00000026279 13509 0.951 - - - - 0.951 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
93. NAP1L1 ENSGALG00000010238 14506 0.95 - - - - 0.950 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
94. BAG4 ENSGALG00000003254 5751 0.95 - - - - 0.950 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
95. MRPL23 ENSGALG00000006561 13737 0.949 - - - - 0.949 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
96. RPL24 ENSGALG00000015339 227460 0.948 - - - - 0.948 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
97. TLK2 ENSGALG00000000410 4690 0.948 - - - - 0.948 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
98. TMEM165 ENSGALG00000027886 5468 0.948 - - - - 0.948 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
99. EXO1 ENSGALG00000010748 7572 0.948 - - - - 0.948 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
100. MRPS25 ENSGALG00000008506 12131 0.948 - - - - 0.948 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA