Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB11FIP1

Gene Name Gene ID Reads Annotation
RAB11FIP1 41 RAB11 family interacting protein 1, transcript variant X2











Genes with expression patterns similar to RAB11FIP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB11FIP1 41 6 - - 1.000 1.000 - 1.000 1.000 1.000 - 1.000 RAB11 family interacting protein 1, transcript variant X2
2. KLHL30 ENSGALG00000006260 32 1.86 - - - - - - 1.000 - - 0.860 kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
3. ENSGALG00000005723 ENSGALG00000005723 36 1.843 - - 0.935 - - - - 0.908 - -
4. CDKL5 ENSGALG00000016529 26 1.801 - - - - - - 1.000 - - 0.801 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
5. ATXN3 ENSGALG00000010766 48 1.765 - - 0.957 - - - - - - 0.808 ataxin 3 [Source:NCBI gene;Acc:378424]
6. FAM126B ENSGALG00000020869 19 1.715 - - - - - - - 0.850 - 0.865 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
7. GPAM ENSGALG00000008795 18 1.679 - - - - - 0.869 - 0.810 - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
8. C15orf60 C15orf60 16 1.67 - - 0.953 - - - - 0.717 - -
9. DIXDC1 ENSGALG00000007929 67 1.632 - - 0.897 - - - - 0.735 - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
10. KIAA1549L ENSGALG00000012020 33 1.58 - - - - - - - 0.767 - 0.813 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
11. BMPR-II BMPR-II 33 1.464 - - - - - - - 0.713 - 0.751
12. FLVCR1 ENSGALG00000009807 21 1.463 - - - - - 0.759 - 0.704 - - feline leukemia virus subgroup C cellular receptor 1 [Source:HGNC Symbol;Acc:HGNC:24682]
13. HTATIP2 ENSGALG00000002581 529 1.437 - - 0.731 - - - - - - 0.706 HIV-1 Tat interactive protein 2, transcript variant X2
14. ADAM28 ENSGALG00000000357 57 1.431 - - - - - 0.706 - 0.725 - - ADAM metallopeptidase domain 28, transcript variant X2
15. OCSTAMP ENSGALG00000044719 10 1 - - - - - - 1.000 - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
16. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
17. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
18. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
19. SMAD9 ENSGALG00000017050 11 1 - - - - - - 1.000 - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
20. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
21. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
22. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
23. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
24. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
25. MCOLN3 ENSGALG00000008709 21 1 - - - - - - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
26. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
27. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
28. RAB37 ENSGALG00000027789 17 1 - - - - - - 1.000 - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
29. CACNA1C ENSGALG00000013022 322 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
30. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
31. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
32. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
33. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
34. SS2 ENSGALG00000003034 277 1 - - - - - - 1.000 - - - somatostatin II [Source:NCBI gene;Acc:395106]
35. FBXO43 ENSGALG00000038940 7 1 - - - - - - 1.000 - - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
36. DPYS ENSGALG00000039011 54 1 - - - - - - 1.000 - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
37. AOX1 ENSGALG00000008185 14 1 - - - - - - 1.000 - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
38. ENSGALG00000011799 ENSGALG00000011799 37 1 - - - - - - 1.000 - - -
39. C1S ENSGALG00000014603 80 1 - - - - - - 1.000 - - - complement C1s [Source:NCBI gene;Acc:418294]
40. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
41. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
42. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
43. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
44. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
45. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
46. IRF-4 IRF-4 19 1 - - - - - - 1.000 - - -
47. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
48. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
49. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
50. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
51. CLRN1 ENSGALG00000010384 7 1 - - - - - - 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
52. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
53. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
54. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
55. BMP2K ENSGALG00000010885 37 0.958 - - 0.958 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
56. TOX3 ENSGALG00000034649 54 0.958 - - 0.958 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
57. EML5 ENSGALG00000010639 25 0.958 - - 0.958 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
58. AHR2 ENSGALG00000023742 21 0.956 - - 0.956 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
59. KPNA5 ENSGALG00000014937 28 0.955 - - 0.955 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
60. PPP4R4 ENSGALG00000010950 19 0.953 - - - - - 0.953 - - - - protein phosphatase 4 regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:23788]
61. FAM117A ENSGALG00000009943 1 0.953 - - - - - 0.953 - - - - family with sequence similarity 117 member A [Source:HGNC Symbol;Acc:HGNC:24179]
62. MICAL2 ENSGALG00000005540 25 0.953 - - - - - 0.953 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
63. GALNT11 ENSGALG00000006233 210 0.952 - - 0.952 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
64. PLXNB2 ENSGALG00000039861 338 0.952 - - 0.952 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
65. ACSF3 ENSGALG00000035225 261 0.949 - - 0.949 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
66. ZNF143 ENSGALG00000005787 345 0.949 - - - - - - - 0.949 - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
67. DNALI1 ENSGALG00000001996 64 0.949 - - 0.949 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
68. PRC1 ENSGALG00000012836 20 0.948 - - 0.948 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
69. FSCN2 ENSGALG00000023354 13 0.946 - - 0.946 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
70. TBC1D8B ENSGALG00000009040 75 0.946 - - 0.946 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
71. Y Y 51 0.945 - - - - - - - 0.945 - -
72. CYP39A1 ENSGALG00000016710 16 0.945 - - - - - - - 0.945 - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
73. FMN2 ENSGALG00000031427 77 0.944 - - 0.944 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
74. PHTF2 ENSGALG00000008335 722 0.942 - - 0.942 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
75. LLGL1 ENSGALG00000014408 15 0.942 - - 0.942 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
76. EPHA1 ENSGALG00000014687 174 0.94 - - 0.940 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
77. MEIG1 ENSGALG00000000451 12 0.94 - - - - - - - 0.940 - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
78. ENSGALG00000028778 ENSGALG00000028778 47 0.939 - - 0.939 - - - - - - -
79. PDZK1IP1 ENSGALG00000010473 551 0.939 - - 0.939 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
80. CREB3 ENSGALG00000002523 23 0.938 - - 0.938 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
81. OTOA ENSGALG00000007070 94 0.935 - - 0.935 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
82. FGF3 ENSGALG00000026853 89 0.934 - - - - - 0.934 - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
83. FAM3B ENSGALG00000016140 111 0.934 - - 0.934 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
84. ZZEF1 ENSGALG00000001546 767 0.93 - - 0.930 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
85. CD300A CD300A 173 0.929 - - 0.929 - - - - - - -
86. DFFB ENSGALG00000036295 88 0.923 - - 0.923 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
87. PKD2 ENSGALG00000010921 55 0.922 - - 0.922 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
88. DLX6 ENSGALG00000023195 29 0.921 - - 0.921 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
89. FAM199X ENSGALG00000008872 44 0.921 - - 0.921 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
90. NHLRC2 ENSGALG00000008946 387 0.918 - - 0.918 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
91. SCNM1 ENSGALG00000046607 665 0.918 - - 0.918 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
92. PRKCE ENSGALG00000010000 99 0.915 - - 0.915 - - - - - - - protein kinase C epsilon, transcript variant X1
93. DVL3 ENSGALG00000008414 38 0.915 - - 0.915 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
94. CNKSR1 ENSGALG00000046299 195 0.913 - - 0.913 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
95. SCN5A ENSGALG00000006112 137 0.912 - - 0.912 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
96. NUDT4 ENSGALG00000011285 2998 0.907 - - 0.907 - - - - - - - nudix hydrolase 4, transcript variant X5
97. GABRA1 ENSGALG00000001698 120 0.905 - - 0.905 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
98. SEC22C ENSGALG00000005268 1151 0.904 - - 0.904 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
99. KIDINS220 ENSGALG00000016409 854 0.902 - - 0.902 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
100. APH1A ENSGALG00000045163 146 0.901 - - 0.901 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]

There are 376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA