Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB11B

Gene Name Gene ID Reads Annotation
RAB11B ENSGALG00000000613 20696 RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]











Genes with expression patterns similar to RAB11B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB11B ENSGALG00000000613 20696 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
2. MRPL20 ENSGALG00000001542 28764 1.71 - - - - 0.874 - 0.836 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
3. HNRNPLL ENSGALG00000008504 14719 1.684 - - - - 0.921 - 0.763 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
4. TMED2 ENSGALG00000003307 20704 1.672 - - - - 0.901 - 0.771 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
5. GPALPP1 ENSGALG00000031567 4221 1.671 - - - - 0.921 - 0.750 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
6. MAP2K4 ENSGALG00000032178 5982 1.663 - - - - 0.927 - 0.736 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
7. GMNN ENSGALG00000013626 15838 1.662 - - - - 0.898 - 0.764 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
8. MOCS2 ENSGALG00000014906 4974 1.654 - - - - 0.877 - 0.777 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
9. PSMD12 ENSGALG00000026225 17473 1.649 - - - - 0.859 - 0.790 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
10. SRSF6 ENSGALG00000000990 12424 1.646 - - - - 0.895 - 0.751 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
11. RANBP1 ENSGALG00000002107 17715 1.636 - - - - 0.833 - 0.803 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
12. BRP44 BRP44 17093 1.624 - - - - 0.829 - 0.795 - - -
13. HSPA9 ENSGALG00000002363 31172 1.608 - - - - 0.834 - 0.774 - - - heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
14. ZNF593 ENSGALG00000000542 79105 1.578 - - - - 0.846 - 0.732 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
15. KDM5B ENSGALG00000038948 50645 1.574 - - - - 0.762 - 0.812 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
16. PSMB7 ENSGALG00000001103 42683 1.571 - - - - 0.790 - 0.781 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
17. GOLGA7 ENSGALG00000003483 26525 1.566 - - - - 0.861 - 0.705 - - - golgin A7 [Source:NCBI gene;Acc:426787]
18. AP5M1 ENSGALG00000012101 10868 1.548 - - - - - - 0.708 0.840 - - adaptor related protein complex 5 subunit mu 1 [Source:HGNC Symbol;Acc:HGNC:20192]
19. SAR1A ENSGALG00000004431 28833 1.53 - - - - - 0.721 0.809 - - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
20. SSU72 ENSGALG00000001489 7589 1.505 - - - - - - 0.796 0.709 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
21. DGCR2 ENSGALG00000005891 8405 1.453 - - - - - - 0.747 0.706 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
22. NEK6 ENSGALG00000001118 20333 1.45 - - - - - - 0.747 0.703 - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
23. EXOSC3 ENSGALG00000002426 7255 1.433 - - 0.717 - - - 0.716 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
24. COPB2 ENSGALG00000005357 15208 0.939 - - - - 0.939 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
25. SOD2 ENSGALG00000011661 13178 0.935 - - - - 0.935 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
26. CLTC ENSGALG00000005139 22130 0.935 - - - - 0.935 - - - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
27. WSB2 ENSGALG00000008151 13246 0.934 - - - - 0.934 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
28. ZNF326 ENSGALG00000006113 15141 0.934 - - - - 0.934 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
29. RSU1 ENSGALG00000040891 12561 0.933 - - - - 0.933 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
30. KDM1A ENSGALG00000033469 20632 0.932 - - - - 0.932 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
31. RBM15B 5416 0.931 - - - - 0.931 - - - - - RNA binding motif protein 15B
32. SUGT1 ENSGALG00000016946 22881 0.93 - - - - 0.930 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
33. EIF3J ENSGALG00000008187 43570 0.93 - - - - 0.930 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
34. CNOT2 ENSGALG00000010042 7612 0.93 - - - - 0.930 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
35. TIMM21 ENSGALG00000013709 3215 0.928 - - - - 0.928 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
36. TLK1 ENSGALG00000009569 5446 0.927 - - - - 0.927 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
37. NMT1 ENSGALG00000000857 5770 0.926 - - - - 0.926 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
38. SH3GLB1 ENSGALG00000006284 12764 0.926 - - - - 0.926 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
39. FOCAD ENSGALG00000015071 3677 0.924 - - - - 0.924 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
40. TRAM1 ENSGALG00000041112 22876 0.924 - - - - 0.924 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
41. SFRP2 ENSGALG00000009241 4716 0.923 - - - - 0.923 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
42. OCIAD1 ENSGALG00000014081 12065 0.923 - - - - 0.923 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
43. SMS ENSGALG00000016379 11607 0.923 - - - - 0.923 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
44. CDR2L ENSGALG00000026295 4142 0.923 - - - - 0.923 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
45. LSMD1 LSMD1 2562 0.922 - - - - 0.922 - - - - -
46. DYNC1LI1 ENSGALG00000011491 11011 0.922 - - - - 0.922 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
47. C9orf89 C9orf89 3056 0.922 - - - - 0.922 - - - - -
48. gga-mir-1778 ENSGALG00000025181 8765 0.921 - - - - 0.921 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
49. TXNDC9 ENSGALG00000032090 6804 0.921 - - - - 0.921 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
50. SRP68 ENSGALG00000002062 7370 0.921 - - - - 0.921 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
51. GLB1L2 ENSGALG00000001604 4057 0.921 - - - - 0.921 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
52. KAT6A ENSGALG00000003641 2631 0.921 - - - - 0.921 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
53. AEN ENSGALG00000044204 2633 0.921 - - - - 0.921 - - - - - apoptosis enhancing nuclease, transcript variant X1
54. TIA1 ENSGALG00000013879 16330 0.921 - - - - 0.921 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
55. HABP4 ENSGALG00000012628 2894 0.92 - - - - 0.920 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
56. COPG2 ENSGALG00000008144 4542 0.92 - - - - 0.920 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
57. ITPK1 ENSGALG00000034898 4212 0.919 - - - - 0.919 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
58. ASPM ENSGALG00000032398 12784 0.919 - - - - 0.919 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
59. CRIPT ENSGALG00000010014 4311 0.919 - - - - 0.919 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
60. PIK3CD ENSGALG00000002583 1036 0.919 - - - - 0.919 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
61. MPPED1 ENSGALG00000014186 5726 0.919 - - - - 0.919 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
62. RHBDF1 ENSGALG00000007434 2359 0.919 - - - - 0.919 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
63. RNF11 ENSGALG00000010539 8617 0.919 - - - - 0.919 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
64. MAP1LC3A ENSGALG00000038721 2230 0.919 - - - - 0.919 - - - - - microtubule associated protein 1 light chain 3 alpha
65. TMEM167A ENSGALG00000027332 13862 0.918 - - - - 0.918 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
66. ZC3H15 ENSGALG00000041857 19808 0.918 - - - - 0.918 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
67. MANF ENSGALG00000002362 7518 0.918 - - - - 0.918 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
68. UTP15 ENSGALG00000013510 13122 0.918 - - - - 0.918 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
69. ANXA11 ENSGALG00000043826 5189 0.918 - - - - 0.918 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
70. MTG1 ENSGALG00000003549 5032 0.918 - - - - 0.918 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
71. MXD4 ENSGALG00000015688 1472 0.917 - - - - 0.917 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
72. B4GAL-T7 B4GAL-T7 12356 0.917 - - - - 0.917 - - - - -
73. ENSGALG00000005720 ENSGALG00000005720 1666 0.917 - - - - 0.917 - - - - -
74. TMEM65 ENSGALG00000037371 776 0.917 - - - - 0.917 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
75. PCIF1 ENSGALG00000023547 867 0.917 - - - - 0.917 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
76. FBXW7 ENSGALG00000010103 5982 0.916 - - - - 0.916 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
77. DARS ENSGALG00000012355 2887 0.916 - - - - 0.916 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
78. RBM5 30998 0.916 - - - - 0.916 - - - - - RNA binding motif protein 5, transcript variant X1
79. MAP3K13 ENSGALG00000006655 632 0.915 - - - - 0.915 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
80. AIP ENSGALG00000040247 4166 0.915 - - - - 0.915 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
81. BTBD7 4136 0.914 - - - - 0.914 - - - - - BTB domain containing 7, transcript variant X2
82. CLSPN ENSGALG00000002346 2590 0.914 - - - - 0.914 - - - - - claspin [Source:NCBI gene;Acc:428223]
83. PDXP ENSGALG00000023131 2663 0.914 - - - - 0.914 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
84. LFNG ENSGALG00000038515 5178 0.913 - - - - 0.913 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
85. ADSL ENSGALG00000012034 10280 0.912 - - - - 0.912 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
86. TSPAN5 ENSGALG00000012227 8703 0.912 - - - - 0.912 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
87. EIF4G3 ENSGALG00000010084 5881 0.912 - - - - 0.912 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
88. WDR36 ENSGALG00000000247 11277 0.912 - - - - 0.912 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
89. PAXIP1 ENSGALG00000036064 3120 0.912 - - - - 0.912 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
90. NOL12 ENSGALG00000012410 5658 0.911 - - - - 0.911 - - - - - nucleolar protein 12
91. MRPL32 ENSGALG00000037258 6861 0.911 - - - - 0.911 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
92. TDRD3 ENSGALG00000016936 3412 0.911 - - - - 0.911 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
93. CSNK1E ENSGALG00000032257 2165 0.911 - - - - 0.911 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
94. DIABLO ENSGALG00000004412 9499 0.91 - - - - 0.910 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
95. FAM18B1 ENSGALG00000001335 5177 0.91 - - - - 0.910 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
96. DRG1 ENSGALG00000006921 10791 0.91 - - - - 0.910 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
97. TPP2 ENSGALG00000016865 7509 0.91 - - - - 0.910 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
98. LSM6 ENSGALG00000009985 18582 0.909 - - - - 0.909 - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
99. LASP-2 LASP-2 4415 0.901 - - - - 0.901 - - - - -
100. MTA1 ENSGALG00000002803 11572 0.901 - - - - 0.901 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]

There are 480 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA