Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for R3hdm2

Gene Name Gene ID Reads Annotation
R3hdm2 ENSMUSG00000025404 1509 R3H domain containing 2 [Source:MGI Symbol;Acc:MGI:1919000]







Genes with expression patterns similar to R3hdm2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. R3hdm2 ENSMUSG00000025404 1509 6 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing 2 [Source:MGI Symbol;Acc:MGI:1919000]
2. Ccdc102a ENSMUSG00000063605 502 0.934 - 0.934 - - - - coiled-coil domain containing 102A [Source:MGI Symbol;Acc:MGI:2686927]
3. 9430020K01Rik 552 0.925 - 0.925 - - - - RIKEN cDNA 9430020K01 gene, transcript variant X1
4. Aurkb ENSMUSG00000020897 2512 0.898 - 0.898 - - - - aurora kinase B [Source:MGI Symbol;Acc:MGI:107168]
5. D930016D06Rik ENSMUSG00000097392 1429 0.885 - 0.885 - - - - RIKEN cDNA D930016D06 gene [Source:MGI Symbol;Acc:MGI:2442700]
6. Med7 ENSMUSG00000020397 2247 0.878 - 0.878 - - - - mediator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1913463]
7. Upf1 ENSMUSG00000058301 1982 0.873 - 0.873 - - - - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
8. Snx17 ENSMUSG00000029146 2096 0.871 - 0.871 - - - - sorting nexin 17 [Source:MGI Symbol;Acc:MGI:2387801]
9. Ccs ENSMUSG00000034108 558 0.868 - 0.868 - - - - copper chaperone for superoxide dismutase [Source:MGI Symbol;Acc:MGI:1333783]
10. Ednra ENSMUSG00000031616 1286 0.864 - 0.864 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
11. Ehmt2 ENSMUSG00000013787 1901 0.863 - 0.863 - - - - euchromatic histone lysine N-methyltransferase 2 [Source:MGI Symbol;Acc:MGI:2148922]
12. Ap1b1 ENSMUSG00000009090 1648 0.862 - 0.862 - - - - adaptor protein complex AP-1, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1096368]
13. Zfp334 ENSMUSG00000017667 3163 0.86 - 0.860 - - - - zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
14. Rell1 ENSMUSG00000047881 1229 0.857 - 0.857 - - - - RELT-like 1 [Source:MGI Symbol;Acc:MGI:2140767]
15. Rnpepl1 ENSMUSG00000026269 972 0.857 - 0.857 - - - - arginyl aminopeptidase (aminopeptidase B)-like 1 [Source:MGI Symbol;Acc:MGI:1914170]
16. Rc3h2 ENSMUSG00000075376 2007 0.857 - 0.857 - - - - ring finger and CCCH-type zinc finger domains 2 [Source:MGI Symbol;Acc:MGI:2442789]
17. Cryzl1 ENSMUSG00000058240 2195 0.855 - 0.855 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
18. Nvl ENSMUSG00000026516 1431 0.85 - 0.850 - - - - nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
19. Fam3c ENSMUSG00000029672 1429 0.846 - 0.846 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
20. Wdr73 ENSMUSG00000025722 956 0.845 - 0.845 - - - - WD repeat domain 73 [Source:MGI Symbol;Acc:MGI:1919218]
21. Banp ENSMUSG00000025316 1068 0.84 - 0.840 - - - - BTG3 associated nuclear protein [Source:MGI Symbol;Acc:MGI:1889023]
22. Zfp513 ENSMUSG00000043059 2452 0.837 - 0.837 - - - - zinc finger protein 513 [Source:MGI Symbol;Acc:MGI:2141255]
23. Zfp407 ENSMUSG00000048410 2356 0.837 - 0.837 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
24. Gfer ENSMUSG00000040888 1546 0.834 - 0.834 - - - - growth factor, augmenter of liver regeneration [Source:MGI Symbol;Acc:MGI:107757]
25. Timp1 ENSMUSG00000001131 780 0.834 - 0.834 - - - - tissue inhibitor of metalloproteinase 1 [Source:MGI Symbol;Acc:MGI:98752]
26. Eri3 ENSMUSG00000033423 3943 0.833 - 0.833 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
27. Anapc4 ENSMUSG00000029176 2907 0.829 - 0.829 - - - - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
28. Snn ENSMUSG00000037972 2995 0.822 - 0.822 - - - - stannin [Source:MGI Symbol;Acc:MGI:1276549]
29. Rnf10 ENSMUSG00000041740 4736 0.821 - 0.821 - - - - ring finger protein 10 [Source:MGI Symbol;Acc:MGI:1859162]
30. Lipa ENSMUSG00000024781 1278 0.821 - 0.821 - - - - lysosomal acid lipase A [Source:MGI Symbol;Acc:MGI:96789]
31. Rnaseh2c ENSMUSG00000024925 2015 0.82 - 0.820 - - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
32. Fyn ENSMUSG00000019843 2176 0.819 - 0.819 - - - - Fyn proto-oncogene [Source:MGI Symbol;Acc:MGI:95602]
33. Mettl13 ENSMUSG00000026694 1671 0.816 - 0.816 - - - - methyltransferase like 13 [Source:MGI Symbol;Acc:MGI:1918699]
34. Ndc80 ENSMUSG00000024056 2132 0.811 - 0.811 - - - - NDC80 kinetochore complex component [Source:MGI Symbol;Acc:MGI:1914302]
35. C2cd2l ENSMUSG00000032120 223 0.801 - 0.801 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
36. Ubox5 ENSMUSG00000027300 434 0.8 - 0.800 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
37. Pwp1 ENSMUSG00000001785 2614 0.8 - 0.800 - - - - PWP1 homolog, endonuclein [Source:MGI Symbol;Acc:MGI:1914735]
38. Fam120aos ENSMUSG00000097059 81 0.799 - 0.799 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
39. Tapt1 ENSMUSG00000046985 1206 0.799 - 0.799 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
40. Rspo2 ENSMUSG00000051920 204 0.799 - 0.799 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
41. Dip2a ENSMUSG00000020231 649 0.799 - 0.799 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
42. Clint1 ENSMUSG00000006169 4277 0.799 - 0.799 - - - - clathrin interactor 1 [Source:MGI Symbol;Acc:MGI:2144243]
43. Gm16702 ENSMUSG00000097796 133 0.799 - 0.799 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
44. 4933415A04Rik ENSMUSG00000045877 412 0.797 - 0.797 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
45. Slc16a9 ENSMUSG00000037762 83 0.795 - 0.795 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
46. Flot1 ENSMUSG00000059714 1261 0.795 - 0.795 - - - - flotillin 1 [Source:MGI Symbol;Acc:MGI:1100500]
47. Evi5l ENSMUSG00000011832 691 0.795 - 0.795 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
48. Scara5 ENSMUSG00000022032 68 0.794 - 0.794 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
49. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.794 - 0.794 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
50. Pigu ENSMUSG00000038383 705 0.793 - 0.793 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
51. Gm16409 ENSMUSG00000075581 176 0.793 - 0.793 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
52. Zfp947 ENSMUSG00000063383 396 0.793 - 0.793 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
53. Fam132b 102 0.793 - 0.793 - - - - family with sequence similarity 132, member B, transcript variant X3
54. 0610005C13Rik ENSMUSG00000109644 478 0.792 - 0.792 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
55. Gm10307 ENSMUSG00000101093 159 0.792 - 0.792 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
56. Crcp ENSMUSG00000025532 699 0.792 - 0.792 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
57. Dpy19l4 ENSMUSG00000045205 962 0.792 - 0.792 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
58. Sec11c ENSMUSG00000024516 640 0.792 - 0.792 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
59. Gnpda2 ENSMUSG00000029209 182 0.791 - 0.791 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
60. Cyr61 ENSMUSG00000028195 563 0.791 - 0.791 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
61. Gm4335 ENSMUSG00000097989 113 0.791 - 0.791 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
62. Zfp609 ENSMUSG00000040524 1316 0.79 - 0.790 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
63. Gm8349 ENSMUSG00000098208 124 0.79 - 0.790 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
64. Gm13652 ENSMUSG00000087333 91 0.79 - 0.790 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
65. Gm12005 ENSMUSG00000081631 601 0.79 - 0.790 - - - - predicted gene 12005 [Source:MGI Symbol;Acc:MGI:3651316]
66. Usf1 ENSMUSG00000026641 336 0.79 - 0.790 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
67. Lamtor2 ENSMUSG00000028062 570 0.789 - 0.789 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
68. Pgap1 ENSMUSG00000073678 833 0.789 - 0.789 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
69. Map3k1 ENSMUSG00000021754 2844 0.789 - 0.789 - - - - mitogen-activated protein kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346872]
70. Rfx5 ENSMUSG00000005774 204 0.789 - 0.789 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
71. Mtx3 ENSMUSG00000021704 616 0.788 - 0.788 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
72. Med13l ENSMUSG00000018076 1863 0.788 - 0.788 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
73. Gm16300 ENSMUSG00000089828 225 0.787 - 0.787 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
74. Serping1 ENSMUSG00000023224 2221 0.787 - 0.787 - - - - serine (or cysteine) peptidase inhibitor, clade G, member 1 [Source:MGI Symbol;Acc:MGI:894696]
75. Ube2e2 ENSMUSG00000058317 729 0.787 - 0.787 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:MGI Symbol;Acc:MGI:2384997]
76. Vps9d1 ENSMUSG00000001062 694 0.787 - 0.787 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
77. Rrp15 ENSMUSG00000001305 966 0.787 - 0.787 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
78. Ccar2 ENSMUSG00000033712 2357 0.787 - 0.787 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
79. Pank1 ENSMUSG00000033610 1083 0.786 - 0.786 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
80. Casp8ap2 ENSMUSG00000028282 2728 0.786 - 0.786 - - - - caspase 8 associated protein 2 [Source:MGI Symbol;Acc:MGI:1349399]
81. Tgfbrap1 ENSMUSG00000070939 1413 0.786 - 0.786 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
82. Phyh ENSMUSG00000026664 659 0.785 - 0.785 - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
83. Itfg2 ENSMUSG00000001518 1233 0.785 - 0.785 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
84. AW209491 ENSMUSG00000039182 618 0.785 - 0.785 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
85. Arhgap23 ENSMUSG00000049807 1316 0.785 - 0.785 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
86. Usp2 ENSMUSG00000032010 525 0.785 - 0.785 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
87. Prcc ENSMUSG00000004895 527 0.784 - 0.784 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
88. Phkb ENSMUSG00000036879 701 0.783 - 0.783 - - - - phosphorylase kinase beta [Source:MGI Symbol;Acc:MGI:97578]
89. Nsun4 ENSMUSG00000028706 804 0.783 - 0.783 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
90. Palld ENSMUSG00000058056 1488 0.783 - 0.783 - - - - palladin, cytoskeletal associated protein [Source:MGI Symbol;Acc:MGI:1919583]
91. Gm11944 ENSMUSG00000084941 286 0.783 - 0.783 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
92. Gm26822 ENSMUSG00000096921 421 0.783 - 0.783 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
93. Gclc ENSMUSG00000032350 1737 0.782 - 0.782 - - - - glutamate-cysteine ligase, catalytic subunit [Source:MGI Symbol;Acc:MGI:104990]
94. Rab3gap1 ENSMUSG00000036104 515 0.782 - 0.782 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
95. Gm15879 ENSMUSG00000084790 387 0.781 - 0.781 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
96. Pdgfb ENSMUSG00000000489 325 0.781 - 0.781 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
97. Dido1 ENSMUSG00000038914 1891 0.781 - 0.781 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
98. Ccnf ENSMUSG00000072082 2671 0.78 - 0.780 - - - - cyclin F [Source:MGI Symbol;Acc:MGI:102551]
99. Chfr ENSMUSG00000014668 1287 0.78 - 0.780 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
100. Gm10689 ENSMUSG00000074412 328 0.779 - 0.779 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA