Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for R3HDM1

Gene Name Gene ID Reads Annotation
R3HDM1 ENSGALG00000012246 6580 R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]











Genes with expression patterns similar to R3HDM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. R3HDM1 ENSGALG00000012246 6580 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
2. C11H16ORF80 C11H16ORF80 18673 1.799 - - - - - - 0.919 0.880 - -
3. DAD1 ENSGALG00000035626 32604 1.725 - - - - - - 0.868 0.857 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
4. CCNC ENSGALG00000015471 6497 1.712 - - - - - - 0.889 0.823 - - cyclin C [Source:NCBI gene;Acc:421791]
5. MRPL2 ENSGALG00000008597 16500 1.682 - - - - - - 0.876 0.806 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
6. GPR162 ENSGALG00000022926 7181 1.68 - - - - - - 0.814 0.866 - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
7. NUP85 ENSGALG00000007974 21249 1.665 - - - - - - 0.839 0.826 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
8. INCENP ENSGALG00000007537 16617 1.664 - - - - - - 0.849 0.815 - - inner centromere protein [Source:NCBI gene;Acc:396270]
9. NDUFA12 ENSGALG00000011325 19807 1.658 - - - - - - 0.877 0.781 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
10. KDM1A ENSGALG00000033469 20632 1.635 - - - - - - 0.831 0.804 - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
11. ADI1 ENSGALG00000025796 8636 1.634 - - - - - - 0.761 0.873 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
12. ADSL ENSGALG00000012034 10280 1.633 - - - - - - 0.838 0.795 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
13. EXOSC10 ENSGALG00000003086 3223 1.633 - - - - - - 0.850 0.783 - - exosome component 10 [Source:NCBI gene;Acc:419454]
14. FAM63B 3793 1.628 - - - - - - 0.881 0.747 - - family with sequence similarity 63 member B
15. HCCS ENSGALG00000005571 4939 1.626 - - - - - - 0.839 0.787 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
16. ADRM1 ENSGALG00000005200 5417 1.624 - - - - - - 0.814 0.810 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
17. CCNDBP1 ENSGALG00000004837 11520 1.622 - - - - - - 0.790 0.832 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
18. DCPS ENSGALG00000031143 10191 1.615 - - - - - - 0.799 0.816 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
19. PAPSS1 ENSGALG00000010542 5631 1.61 - - - - - - 0.739 0.871 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
20. WDR48 ENSGALG00000006052 3575 1.607 - - - - - - 0.816 0.791 - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
21. MCM3AP ENSGALG00000004363 3247 1.606 - - - - - - 0.837 0.769 - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
22. ANAPC1 ENSGALG00000008254 2519 1.605 - - - - - - 0.831 0.774 - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
23. SPCS1 ENSGALG00000001655 7718 1.598 - - - - - - 0.812 0.786 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
24. ASH2L ENSGALG00000003233 4814 1.598 - - - - - - 0.863 0.735 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
25. HARS ENSGALG00000035080 11602 1.592 - - - - - - 0.855 0.737 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
26. POLR2B ENSGALG00000011387 4864 1.59 - - - - - - 0.834 0.756 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
27. DERL1 ENSGALG00000033950 15074 1.59 - - 0.713 - - - 0.877 - - - derlin 1 [Source:NCBI gene;Acc:420350]
28. CNOT11 ENSGALG00000039563 11251 1.59 - - - - - - 0.741 0.849 - - CCR4-NOT transcription complex subunit 11
29. DHX30 ENSGALG00000039830 5187 1.587 - - - - - - 0.747 0.840 - - DExH-box helicase 30 [Source:NCBI gene;Acc:420376]
30. C4orf27 C4orf27 16724 1.586 - - - - - - 0.768 0.818 - -
31. ERO1LB ERO1LB 2910 1.586 - - - - - - - 0.819 0.767 -
32. BPNT1 ENSGALG00000009576 7445 1.585 - - - - - - 0.793 0.792 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
33. AZIN1 ENSGALG00000029295 11085 1.583 - - - - - - 0.775 0.808 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
34. MPPED1 ENSGALG00000014186 5726 1.579 - - - - - - 0.825 0.754 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
35. DNM1L ENSGALG00000012929 6174 1.577 - - - - - - 0.821 0.756 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
36. TRAPPC6B ENSGALG00000010157 7567 1.576 - - - - - - 0.789 0.787 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
37. GPR161 ENSGALG00000015247 3473 1.574 - - - - - - 0.773 0.801 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
38. TXNDC17 ENSGALG00000027950 45004 1.573 - - - - - - 0.866 0.707 - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
39. CCNH ENSGALG00000015641 8051 1.572 - - - - - - 0.836 0.736 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
40. MFAP1 ENSGALG00000028295 6043 1.57 - - - - - - 0.754 0.816 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
41. RRP1B ENSGALG00000035696 12309 1.566 - - - - - - 0.856 0.710 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
42. EVL ENSGALG00000011209 5440 1.564 - - - - - - 0.735 0.829 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
43. TIMM8A ENSGALG00000004963 14263 1.564 - - - - - - 0.774 0.790 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
44. SRSF1 ENSGALG00000005525 4376 1.562 - - - - - - 0.728 0.834 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
45. BLMH ENSGALG00000004259 36907 1.554 - - - - - - 0.755 0.799 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
46. C1H12ORF73 ENSGALG00000030933 5195 1.554 - - - - - - 0.815 0.739 - - chromosome 1 open reading frame, human C12orf73 [Source:NCBI gene;Acc:772057]
47. MRPL50 ENSGALG00000015543 11649 1.554 - - - - - - 0.819 0.735 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
48. SEC61A2 ENSGALG00000036300 4235 1.554 - - - - - - 0.843 0.711 - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
49. WBSCR22 6082 1.552 - - - - - - 0.851 0.701 - - Williams-Beuren syndrome chromosome region 22
50. SPDL1 ENSGALG00000001942 4403 1.549 - - - - - - 0.797 0.752 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
51. RANBP9 ENSGALG00000012696 4871 1.549 - - - - - - 0.759 0.790 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
52. TM4SF18 4553 1.549 - - - - - - 0.715 0.834 - - transmembrane 4 L six family member 18, transcript variant X2
53. CWC27 ENSGALG00000014747 8389 1.548 - - - - - - 0.841 0.707 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
54. WDR3 ENSGALG00000014791 5856 1.546 - - - - - - 0.773 0.773 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
55. RIOK2 ENSGALG00000015288 6280 1.546 - - - - - - 0.831 0.715 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
56. PCNT ENSGALG00000007021 6428 1.544 - - - - - - 0.815 0.729 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
57. SNX7 ENSGALG00000005478 4736 1.541 - - - - - - 0.788 0.753 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
58. GABPB1 ENSGALG00000023440 5676 1.541 - - - - - - 0.818 0.723 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
59. TAF2 ENSGALG00000043193 6311 1.539 - - - - - - 0.752 0.787 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
60. C19H17ORF85 C19H17ORF85 2538 1.536 - - - - - - 0.791 0.745 - -
61. MPI ENSGALG00000029296 11781 1.535 - - - - - - 0.738 0.797 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
62. HOXA3 ENSGALG00000027925 4287 1.535 - - - - - - 0.783 0.752 - - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
63. RAB5C ENSGALG00000003359 5597 1.533 - - - - - - 0.758 0.775 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
64. FAM174A ENSGALG00000026203 8369 1.528 - - - - - - - 0.794 0.734 - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
65. C5H15ORF41 C5H15ORF41 2114 1.525 - - - - - - 0.724 0.801 - -
66. ZFYVE9 ENSGALG00000010613 2421 1.523 - - - - - - 0.763 0.760 - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
67. DSCR3 3583 1.522 - - - - - - 0.778 0.744 - - DSCR3 arrestin fold containing, transcript variant X1
68. SASS6 ENSGALG00000005302 4029 1.522 - - - - - - 0.763 0.759 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
69. YRDC ENSGALG00000029001 6529 1.522 - - - - - - 0.778 0.744 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
70. SF3B3 ENSGALG00000002531 19397 1.519 - - - - - - 0.740 0.779 - - splicing factor 3b subunit 3, transcript variant X2
71. RCN2 ENSGALG00000039284 17848 1.518 - - - - - - 0.714 0.804 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
72. SWIP-1 SWIP-1 6024 1.515 - - - - - - 0.723 0.792 - -
73. RRP36 ENSGALG00000028056 7560 1.515 - - - - - - 0.807 0.708 - - ribosomal RNA processing 36
74. CLK1 ENSGALG00000028438 3550 1.514 - - - - - - 0.708 0.806 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
75. TBC1D15 ENSGALG00000010190 4417 1.512 - - - - - - 0.709 0.803 - - TBC1 domain family member 15 [Source:NCBI gene;Acc:417857]
76. GSK3B ENSGALG00000014977 7950 1.509 - - - - - - 0.789 0.720 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
77. ATP6AP1 ENSGALG00000008836 4343 1.508 - - - - - - 0.770 0.738 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
78. TMEM138 ENSGALG00000029480 11268 1.506 - - - - - - 0.701 0.805 - - transmembrane protein 138 [Source:NCBI gene;Acc:426323]
79. NENF ENSGALG00000009821 4826 1.506 - - - - - - 0.791 0.715 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
80. MAFF ENSGALG00000012277 3392 1.505 - - - - - - 0.758 0.747 - - MAF bZIP transcription factor F [Source:NCBI gene;Acc:395519]
81. CTSL2 CTSL2 7966 1.503 - - - - - - 0.791 0.712 - -
82. WSB2 ENSGALG00000008151 13246 1.501 - - - - - - 0.777 0.724 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
83. SLC12A7 ENSGALG00000042396 2183 1.5 - - - - - - 0.713 0.787 - - solute carrier family 12 member 7 [Source:NCBI gene;Acc:420797]
84. CELF1 ENSGALG00000008097 4717 1.5 - - - - - - 0.764 0.736 - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
85. FAM177A1 ENSGALG00000010046 4318 1.499 - - - - - - 0.754 0.745 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
86. TMX4 ENSGALG00000028587 3513 1.498 - - - - - - 0.767 0.731 - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
87. NOP16 ENSGALG00000003355 10692 1.495 - - - - - - 0.794 0.701 - - NOP16 nucleolar protein
88. UNC119B ENSGALG00000026722 8622 1.495 - - - - - - 0.761 0.734 - - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
89. CHRAC1 ENSGALG00000040823 5695 1.493 - - - - - - 0.753 0.740 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
90. BNIP3L ENSGALG00000043405 10316 1.493 - - - - - - 0.772 0.721 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
91. PFKL ENSGALG00000006543 4361 1.492 - - - - - - 0.732 0.760 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
92. RPA3 ENSGALG00000010700 6212 1.491 - - - - - - 0.760 0.731 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
93. COBRA1 COBRA1 4600 1.491 - - - - - - 0.782 0.709 - -
94. HSCB ENSGALG00000005706 12953 1.491 - - - - - - 0.701 0.790 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
95. GXYLT1 ENSGALG00000009532 5682 1.49 - - - - - - 0.779 0.711 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
96. HERPUD2 ENSGALG00000040364 6073 1.49 - - - - - - 0.753 0.737 - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
97. SNX4 ENSGALG00000012052 11634 1.49 - - - - - - 0.756 0.734 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
98. KIF11 ENSGALG00000030597 5528 1.489 - - - - - - 0.731 0.758 - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
99. DNAJA4 ENSGALG00000036850 6847 1.489 - - - - - - 0.782 0.707 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
100. NUBP1 ENSGALG00000007241 3791 1.487 - - - - - - 0.776 0.711 - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]

There are 1267 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA