Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for R3HCC1

Gene Name Gene ID Reads Annotation
R3HCC1 ENSGALG00000036854 1882 R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]











Genes with expression patterns similar to R3HCC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. R3HCC1 ENSGALG00000036854 1882 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]
2. KIF18B ENSGALG00000031553 3192 1.527 - - - - 0.823 - 0.704 - - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
3. SCFD1 ENSGALG00000009916 5756 1.446 - - - - 0.730 - - 0.716 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
4. DSL1 DSL1 113 0.864 - - - - 0.864 - - - - -
5. TEF ENSGALG00000011958 375 0.85 - - - - 0.850 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
6. CFTR ENSGALG00000032986 424 0.841 - - - - 0.841 - - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
7. SPSB3 ENSGALG00000002285 1329 0.838 - - - - 0.838 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
8. RELL1 ENSGALG00000014336 2950 0.838 - - - - 0.838 - - - - - RELT like 1 [Source:NCBI gene;Acc:422795]
9. APTX ENSGALG00000001954 692 0.838 - - - - 0.838 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
10. HSPH1 ENSGALG00000017077 735 0.837 - - - - 0.837 - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
11. ANKRD13C ENSGALG00000031210 2152 0.833 - - - - 0.833 - - - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
12. TMEM66 TMEM66 1964 0.824 - - - - - - 0.824 - - -
13. LRRC6 ENSGALG00000042548 227 0.823 - - - - 0.823 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
14. BBX ENSGALG00000015353 1281 0.821 - - - - 0.821 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
15. NAT9 ENSGALG00000007723 2098 0.817 - - - - 0.817 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
16. DPP7 ENSGALG00000038145 4888 0.814 - - - - 0.814 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
17. CCDC6 ENSGALG00000003165 93 0.813 - - - - 0.813 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
18. CANT1 ENSGALG00000011822 2218 0.813 - - - - 0.813 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
19. TRPC6 ENSGALG00000029416 281 0.812 - - - - 0.812 - - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
20. STON2 ENSGALG00000010579 76 0.812 - - - - 0.812 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
21. ASTE1 ENSGALG00000036171 155 0.809 - - - - 0.809 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
22. PAQR8 ENSGALG00000016675 85 0.809 - - - - 0.809 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
23. CSPP1 1756 0.807 - - - - 0.807 - - - - - centrosome and spindle pole associated protein 1
24. ACP6 ENSGALG00000015485 3147 0.807 - - - - 0.807 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
25. CECR1 336 0.806 - - - - 0.806 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
26. C1orf50 ENSGALG00000004800 4894 0.803 - - - - 0.803 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
27. CADM3 ENSGALG00000036925 1753 0.8 - - - - 0.800 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
28. B3GAT2 ENSGALG00000031590 615 0.799 - - - - 0.799 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
29. CLIC3 ENSGALG00000038789 233 0.796 - - - - 0.796 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
30. KCNC4 ENSGALG00000000400 129 0.796 - - - - 0.796 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
31. PRMT10 PRMT10 1169 0.796 - - - - 0.796 - - - - -
32. COPB2 ENSGALG00000005357 15208 0.795 - - - - - - 0.795 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
33. PTRH2 ENSGALG00000005150 4756 0.794 - - - - - - - 0.794 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
34. FAM171B ENSGALG00000002646 837 0.793 - - - - 0.793 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
35. SRSF4 1200 0.793 - - - - 0.793 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
36. TAC1 ENSGALG00000009737 2211 0.791 - - - - 0.791 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
37. PLEKHB1 ENSGALG00000017321 443 0.79 - - - - 0.790 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
38. ZFAND4 ENSGALG00000005893 1415 0.789 - - - - - - 0.789 - - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
39. DUS2 856 0.789 - - - - 0.789 - - - - - dihydrouridine synthase 2, transcript variant X2
40. ENSGALG00000006865 ENSGALG00000006865 307 0.788 - - - - 0.788 - - - - -
41. TMEM19 ENSGALG00000041783 1545 0.788 - - - - 0.788 - - - - - transmembrane protein 19 [Source:HGNC Symbol;Acc:HGNC:25605]
42. CMTM3 ENSGALG00000000424 393 0.786 - - - - 0.786 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
43. GKAP1 ENSGALG00000012586 2908 0.786 - - - - 0.786 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
44. FAAHL ENSGALG00000015059 1632 0.785 - - - - 0.785 - - - - - fatty acid amide hydrolase-like
45. SCYL2 ENSGALG00000011569 920 0.785 - - - - 0.785 - - - - - SCY1 like pseudokinase 2 [Source:NCBI gene;Acc:417930]
46. CCNC ENSGALG00000015471 6497 0.783 - - - - 0.783 - - - - - cyclin C [Source:NCBI gene;Acc:421791]
47. MED7 ENSGALG00000003870 4244 0.782 - - - - 0.782 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
48. AASDHPPT ENSGALG00000027981 1017 0.781 - - - - 0.781 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
49. CDC16 ENSGALG00000016816 2162 0.781 - - - - 0.781 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
50. SNRNP35 ENSGALG00000003318 1253 0.78 - - - - 0.780 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
51. PPTC7 ENSGALG00000004550 154 0.779 - - - - 0.779 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
52. TAB1 ENSGALG00000012150 4864 0.779 - - - - - - 0.779 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [Source:NCBI gene;Acc:418014]
53. ENSGALG00000022967 ENSGALG00000022967 240 0.779 - - - - 0.779 - - - - -
54. CNN2 ENSGALG00000027777 512 0.779 - - - - 0.779 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
55. MOCS3 ENSGALG00000007986 308 0.777 - - - - 0.777 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
56. HDAC4 ENSGALG00000004288 2124 0.776 - - - - 0.776 - - - - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
57. ENSGALG00000020497 ENSGALG00000020497 446 0.774 - - - - 0.774 - - - - -
58. APMAP ENSGALG00000008651 2167 0.774 - - - - 0.774 - - - - - adipocyte plasma membrane associated protein [Source:NCBI gene;Acc:416715]
59. KIAA1407 KIAA1407 252 0.773 - - - - 0.773 - - - - -
60. CCDC107 ENSGALG00000021897 1223 0.773 - - - - 0.773 - - - - - coiled-coil domain containing 107
61. MAN1C1 ENSGALG00000001038 1679 0.772 - - - - 0.772 - - - - - mannosidase alpha class 1C member 1 [Source:HGNC Symbol;Acc:HGNC:19080]
62. GLT8D1 ENSGALG00000001642 4232 0.772 - - - - 0.772 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
63. CCDC102A ENSGALG00000029999 324 0.772 - - - - 0.772 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
64. MTG2 ENSGALG00000005164 3031 0.771 - - - - - - 0.771 - - - mitochondrial ribosome associated GTPase 2 [Source:HGNC Symbol;Acc:HGNC:16239]
65. OSBPL5 ENSGALG00000006401 3555 0.77 - - - - - - 0.770 - - - oxysterol binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:16392]
66. USP32 ENSGALG00000005350 1686 0.769 - - - - 0.769 - - - - - ubiquitin specific peptidase 32, transcript variant X2
67. BEND3 ENSGALG00000015314 2162 0.768 - - - - - - 0.768 - - - BEN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23040]
68. ABCD2 ENSGALG00000042554 1607 0.767 - - - - 0.767 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
69. KCNB1 ENSGALG00000004758 620 0.766 - - - - 0.766 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
70. GGA.10540 GGA.10540 3324 0.765 - - - - 0.765 - - - - -
71. GPR158 ENSGALG00000007667 111 0.764 - - - - 0.764 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
72. SHOC2 ENSGALG00000008771 2957 0.763 - - - - - - - 0.763 - - SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]
73. PPWD1 ENSGALG00000014756 1118 0.763 - - - - 0.763 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
74. FAM183A 242 0.762 - - - - 0.762 - - - - - family with sequence similarity 183 member A, transcript variant 2
75. AKTIP ENSGALG00000033378 1991 0.762 - - - - 0.762 - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
76. RIOK3 ENSGALG00000015004 4249 0.761 - - - - 0.761 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
77. TSG101 ENSGALG00000006312 8289 0.76 - - - - - - 0.760 - - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
78. GPATCH2L ENSGALG00000010350 8 0.76 - - - - - - - - - 0.760 G-patch domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:20210]
79. YTHDC1 ENSGALG00000035906 471 0.76 - - - - - - - - - 0.760 YTH domain containing 1 [Source:NCBI gene;Acc:422656]
80. VATB VATB 13756 0.758 - - - - - - 0.758 - - -
81. NISCH ENSGALG00000043825 2193 0.758 - - - - - - 0.758 - - - nischarin [Source:HGNC Symbol;Acc:HGNC:18006]
82. C11H19ORF12 C11H19ORF12 5149 0.758 - - - - 0.758 - - - - -
83. DDX27 ENSGALG00000006974 18388 0.757 - - - - - - 0.757 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
84. NEK3 ENSGALG00000017024 696 0.755 - - - - 0.755 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
85. AP4B1 ENSGALG00000035295 2008 0.754 - - - - 0.754 - - - - - adaptor related protein complex 4 beta 1 subunit [Source:NCBI gene;Acc:419879]
86. RABL3 ENSGALG00000014949 2850 0.754 - - - - - - 0.754 - - - RAB, member of RAS oncogene family like 3 [Source:NCBI gene;Acc:418329]
87. ZNF618 ENSGALG00000008886 1326 0.754 - - - - 0.754 - - - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
88. CFLAR ENSGALG00000008240 1077 0.752 - - - - - - 0.752 - - - CASP8 and FADD like apoptosis regulator [Source:NCBI gene;Acc:424080]
89. NDUFAF6 ENSGALG00000040366 1647 0.751 - - - - 0.751 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
90. C7orf26 ENSGALG00000034380 2571 0.75 - - - - - - 0.750 - - - chromosome 7 open reading frame 26 [Source:HGNC Symbol;Acc:HGNC:21702]
91. SPINZ SPINZ 10341 0.748 - - - - - - 0.748 - - -
92. LOC424109 ENSGALG00000008738 3932 0.748 - - - - - - - 0.748 - - alpha-aspartyl dipeptidase
93. ST6GALNAC4 ENSGALG00000005063 1056 0.748 - - - - 0.748 - - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
94. SMN ENSGALG00000002430 7515 0.748 - - - - 0.748 - - - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
95. TRMT5 ENSGALG00000011904 1857 0.747 - - - - - - 0.747 - - - tRNA methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:23141]
96. ENSGALG00000028772 ENSGALG00000028772 1636 0.747 - - - - 0.747 - - - - -
97. SCAF4 ENSGALG00000033965 2027 0.747 - - - - 0.747 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
98. INPP5E ENSGALG00000001964 3580 0.746 - - - - 0.746 - - - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
99. CCDC88A ENSGALG00000043587 2208 0.746 - - - - 0.746 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
100. OFD1 ENSGALG00000016576 1916 0.746 - - - - 0.746 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]

There are 128 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA