Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ptx3

Gene Name Gene ID Reads Annotation
Ptx3 ENSMUSG00000027832 735 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]







Genes with expression patterns similar to Ptx3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ptx3 ENSMUSG00000027832 735 6 1.000 1.000 1.000 1.000 1.000 1.000 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
2. Tstd3 ENSMUSG00000028251 1160 1.9 0.918 - - - - 0.982 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
3. Ccdc12 ENSMUSG00000019659 1494 1.889 0.944 - - - - 0.945 coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
4. Dkk3 ENSMUSG00000030772 426 1.883 0.913 - - - - 0.970 dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
5. Cflar ENSMUSG00000026031 1594 1.825 0.857 - - - - 0.968 CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
6. Dnm2 ENSMUSG00000033335 1247 1.819 0.872 - - - - 0.947 dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
7. Ubap1 ENSMUSG00000028437 2702 1.811 0.828 - - - - 0.983 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
8. Surf4 ENSMUSG00000014867 4366 1.732 0.802 - - - - 0.930 surfeit gene 4 [Source:MGI Symbol;Acc:MGI:98445]
9. Eftud2 ENSMUSG00000020929 2817 1.709 0.759 - - - - 0.950 elongation factor Tu GTP binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1336880]
10. Spen ENSMUSG00000040761 5737 1.647 0.825 - - - - 0.822 spen family transcription repressor [Source:MGI Symbol;Acc:MGI:1891706]
11. Atp6v0c ENSMUSG00000024121 107 0.986 - - - - - 0.986 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
12. Coq10a ENSMUSG00000039914 324 0.986 - - - - - 0.986 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
13. 4632415L05Rik ENSMUSG00000048106 222 0.986 - - - - - 0.986 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
14. Gm15966 ENSMUSG00000085865 150 0.986 - - - - - 0.986 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
15. Adm ENSMUSG00000030790 312 0.986 - - - - - 0.986 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
16. Ccdc68 ENSMUSG00000038903 129 0.986 - - - - - 0.986 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
17. Stk11 ENSMUSG00000003068 745 0.985 - - - - - 0.985 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
18. Dnajc21 ENSMUSG00000044224 1073 0.985 - - - - - 0.985 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
19. Tmub1 ENSMUSG00000028958 444 0.985 - - - - - 0.985 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
20. Xk ENSMUSG00000015342 218 0.984 - - - - - 0.984 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
21. Dym ENSMUSG00000035765 507 0.983 - - - - - 0.983 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
22. Rragd ENSMUSG00000028278 762 0.983 - - - - - 0.983 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
23. Gm16344 ENSMUSG00000084824 377 0.983 - - - - - 0.983 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
24. Caskin2 ENSMUSG00000034471 316 0.983 - - - - - 0.983 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
25. Usp42 ENSMUSG00000051306 1252 0.982 - - - - - 0.982 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
26. Zfp687 ENSMUSG00000019338 583 0.982 - - - - - 0.982 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
27. Fam160a2 ENSMUSG00000044465 874 0.982 - - - - - 0.982 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
28. Rnf31 ENSMUSG00000047098 530 0.981 - - - - - 0.981 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
29. Acyp1 ENSMUSG00000008822 1101 0.981 - - - - - 0.981 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
30. 2810408I11Rik ENSMUSG00000087213 916 0.981 - - - - - 0.981 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
31. Rbm12b1 ENSMUSG00000046667 331 0.98 - - - - - 0.980 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
32. Myo9b ENSMUSG00000004677 902 0.98 - - - - - 0.980 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
33. Mtmr10 ENSMUSG00000030522 476 0.98 - - - - - 0.980 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
34. Zkscan1 ENSMUSG00000029729 2845 0.98 - - - - - 0.980 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
35. Prrg2 ENSMUSG00000007837 453 0.98 - - - - - 0.980 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
36. Gnptg ENSMUSG00000035521 519 0.98 - - - - - 0.980 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
37. Arid3b ENSMUSG00000004661 2972 0.979 - - - - - 0.979 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
38. Shroom4 ENSMUSG00000068270 785 0.979 - - - - - 0.979 shroom family member 4 [Source:MGI Symbol;Acc:MGI:2685570]
39. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.979 - - - - - 0.979 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
40. Plk3 ENSMUSG00000028680 442 0.979 - - - - - 0.979 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
41. Fcgrt ENSMUSG00000003420 484 0.978 - - - - - 0.978 Fc receptor, IgG, alpha chain transporter [Source:MGI Symbol;Acc:MGI:103017]
42. Ccdc104 Ccdc104 1111 0.978 - - - - - 0.978
43. Zfp131 ENSMUSG00000094870 3397 0.978 - - - - - 0.978 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
44. Jak2 ENSMUSG00000024789 1097 0.977 - - - - - 0.977 Janus kinase 2 [Source:MGI Symbol;Acc:MGI:96629]
45. Fbxl6 ENSMUSG00000022559 1084 0.977 - - - - - 0.977 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
46. Gm10576 ENSMUSG00000102578 235 0.977 - - - - - 0.977 predicted gene 10576 [Source:MGI Symbol;Acc:MGI:3642535]
47. Mfng ENSMUSG00000018169 425 0.977 - - - - - 0.977 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
48. Ablim1 ENSMUSG00000025085 1169 0.976 - - - - - 0.976 actin-binding LIM protein 1 [Source:MGI Symbol;Acc:MGI:1194500]
49. Ppm1d ENSMUSG00000020525 1303 0.976 - - - - - 0.976 protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
50. Mdm1 ENSMUSG00000020212 835 0.976 - - - - - 0.976 transformed mouse 3T3 cell double minute 1 [Source:MGI Symbol;Acc:MGI:96951]
51. Atxn2l ENSMUSG00000032637 1322 0.976 - - - - - 0.976 ataxin 2-like [Source:MGI Symbol;Acc:MGI:2446242]
52. Snapin ENSMUSG00000001018 1886 0.976 - - - - - 0.976 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
53. Bcl7b ENSMUSG00000029681 996 0.975 - - - - - 0.975 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
54. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.975 - - - - - 0.975 autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
55. Kcnh2 ENSMUSG00000038319 806 0.975 - - - - - 0.975 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
56. Pon2 ENSMUSG00000032667 1139 0.973 - - - - - 0.973 paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
57. Cdc25c ENSMUSG00000044201 1273 0.972 - - - - - 0.972 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
58. Supt4a ENSMUSG00000020485 3703 0.972 - - - - - 0.972 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
59. Nt5m ENSMUSG00000032615 855 0.972 - - - - - 0.972 5',3'-nucleotidase, mitochondrial [Source:MGI Symbol;Acc:MGI:1917127]
60. Syvn1 ENSMUSG00000024807 910 0.972 - - - - - 0.972 synovial apoptosis inhibitor 1, synoviolin [Source:MGI Symbol;Acc:MGI:1921376]
61. Slco5a1 ENSMUSG00000025938 586 0.971 - - - - - 0.971 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
62. Nufip1 ENSMUSG00000022009 2226 0.97 - - - - - 0.970 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
63. Chchd3 ENSMUSG00000053768 3050 0.97 - - - - - 0.970 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:MGI Symbol;Acc:MGI:1913325]
64. Dpp8 ENSMUSG00000032393 1163 0.97 - - - - - 0.970 dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
65. Timm50 ENSMUSG00000003438 2037 0.969 - - - - - 0.969 translocase of inner mitochondrial membrane 50 [Source:MGI Symbol;Acc:MGI:1913775]
66. Heatr6 ENSMUSG00000000976 1640 0.968 - - - - - 0.968 HEAT repeat containing 6 [Source:MGI Symbol;Acc:MGI:1919790]
67. Nfkbib ENSMUSG00000030595 1018 0.968 - - - - - 0.968 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta [Source:MGI Symbol;Acc:MGI:104752]
68. Inpp5b ENSMUSG00000028894 575 0.968 - - - - - 0.968 inositol polyphosphate-5-phosphatase B [Source:MGI Symbol;Acc:MGI:103257]
69. Vkorc1l1 ENSMUSG00000066735 1190 0.968 - - - - - 0.968 vitamin K epoxide reductase complex, subunit 1-like 1 [Source:MGI Symbol;Acc:MGI:1916818]
70. Prkar2a ENSMUSG00000032601 1406 0.968 - - - - - 0.968 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
71. Map6 ENSMUSG00000055407 476 0.967 - - - - - 0.967 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
72. 2700029M09Rik 2700029M09Rik 1474 0.967 - - - - - 0.967
73. Map2k6 ENSMUSG00000020623 623 0.967 - - - - - 0.967 mitogen-activated protein kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1346870]
74. Trim23 ENSMUSG00000021712 798 0.966 - - - - - 0.966 tripartite motif-containing 23 [Source:MGI Symbol;Acc:MGI:1933161]
75. Enah ENSMUSG00000022995 1908 0.965 - - - - - 0.965 ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
76. Cluh ENSMUSG00000020741 2350 0.965 - - - - - 0.965 clustered mitochondria (cluA/CLU1) homolog [Source:MGI Symbol;Acc:MGI:1921398]
77. Npepl1 ENSMUSG00000039263 1212 0.965 - - - - - 0.965 aminopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:2448523]
78. Trib1 ENSMUSG00000032501 1194 0.965 - - - - - 0.965 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
79. Pdhx ENSMUSG00000010914 1382 0.964 - - - - - 0.964 pyruvate dehydrogenase complex, component X [Source:MGI Symbol;Acc:MGI:1351627]
80. Kcnmb4 ENSMUSG00000054934 1522 0.964 - - - - - 0.964 potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
81. Narg2 Narg2 1692 0.964 - - - - - 0.964
82. Zfp318 ENSMUSG00000015597 1779 0.963 - - - - - 0.963 zinc finger protein 318 [Source:MGI Symbol;Acc:MGI:1889348]
83. Fryl ENSMUSG00000070733 1717 0.962 - - - - - 0.962 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
84. Pelo ENSMUSG00000042275 1496 0.962 - - - - - 0.962 pelota mRNA surveillance and ribosome rescue factor [Source:MGI Symbol;Acc:MGI:2145154]
85. Zc3h7a ENSMUSG00000037965 1775 0.962 - - - - - 0.962 zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
86. Fgd4 ENSMUSG00000022788 6160 0.961 - - - - - 0.961 FYVE, RhoGEF and PH domain containing 4 [Source:MGI Symbol;Acc:MGI:2183747]
87. Bcl2l11 ENSMUSG00000027381 1941 0.961 - - - - - 0.961 BCL2-like 11 (apoptosis facilitator) [Source:MGI Symbol;Acc:MGI:1197519]
88. Ddx27 ENSMUSG00000017999 1798 0.961 - - - - - 0.961 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
89. Bbs2 ENSMUSG00000031755 976 0.961 - - - - - 0.961 Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
90. Irx2 ENSMUSG00000001504 819 0.961 - - - - - 0.961 Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
91. Gm2a ENSMUSG00000000594 385 0.96 0.960 - - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
92. Pnrc2 ENSMUSG00000028675 6182 0.96 - - - - - 0.960 proline-rich nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:106512]
93. Ptpmt1 ENSMUSG00000063235, ENSMUSG00000110860 1572 0.96 - - - - - 0.960 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:66461]
94. Zw10 ENSMUSG00000032264 1164 0.96 - - - - - 0.960 zw10 kinetochore protein [Source:MGI Symbol;Acc:MGI:1349478]
95. Man2a2 ENSMUSG00000038886 1255 0.959 - - - - - 0.959 mannosidase 2, alpha 2 [Source:MGI Symbol;Acc:MGI:2150656]
96. Gm12115 ENSMUSG00000099902 2125 0.959 - - - - - 0.959 predicted gene 12115 [Source:MGI Symbol;Acc:MGI:3652288]
97. Srprb ENSMUSG00000032553 2032 0.958 - - - - - 0.958 signal recognition particle receptor, B subunit [Source:MGI Symbol;Acc:MGI:102964]
98. Smco4 ENSMUSG00000058173 1242 0.958 - - - - - 0.958 single-pass membrane protein with coiled-coil domains 4 [Source:MGI Symbol;Acc:MGI:3039636]
99. Eif2b5 ENSMUSG00000003235 2067 0.958 - - - - - 0.958 eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:MGI Symbol;Acc:MGI:2446176]
100. Megf10 ENSMUSG00000024593 890 0.958 - - - - - 0.958 multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]

There are 527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA