Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Prpf40a

Gene Name Gene ID Reads Annotation
Prpf40a ENSMUSG00000061136 8476 pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]







Genes with expression patterns similar to Prpf40a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prpf40a ENSMUSG00000061136 8476 6 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
2. Sec24b ENSMUSG00000001052 1508 1.752 - 0.869 - - 0.883 - Sec24 related gene family, member B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2139764]
3. Bclaf1 ENSMUSG00000037608 8711 1.651 - 0.869 - - 0.782 - BCL2-associated transcription factor 1 [Source:MGI Symbol;Acc:MGI:1917580]
4. Ndufa9 ENSMUSG00000000399 1650 1.649 - 0.867 - - 0.782 - NADH:ubiquinone oxidoreductase subunit A9 [Source:MGI Symbol;Acc:MGI:1913358]
5. Hadhb ENSMUSG00000059447 4287 1.646 - 0.761 - - 0.885 - hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit [Source:MGI Symbol;Acc:MGI:2136381]
6. Arrb2 ENSMUSG00000060216 1401 1.596 - 0.802 - - 0.794 - arrestin, beta 2 [Source:MGI Symbol;Acc:MGI:99474]
7. Foxo1 ENSMUSG00000044167 1926 1.591 - 0.852 - - 0.739 - forkhead box O1 [Source:MGI Symbol;Acc:MGI:1890077]
8. Smarca4 ENSMUSG00000032187 9676 1.589 0.745 0.844 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:MGI Symbol;Acc:MGI:88192]
9. Gng12 ENSMUSG00000036402 3017 1.576 - 0.834 - - 0.742 - guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171]
10. Gtpbp1 ENSMUSG00000042535 4039 1.541 - 0.774 - - 0.767 - GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:109443]
11. Rab2a ENSMUSG00000047187 6615 0.944 - 0.944 - - - - RAB2A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1928750]
12. Ccdc74a ENSMUSG00000041617 512 0.944 - 0.944 - - - - coiled-coil domain containing 74A [Source:MGI Symbol;Acc:MGI:1919565]
13. Tor1aip1 ENSMUSG00000026466 1480 0.942 - 0.942 - - - - torsin A interacting protein 1 [Source:MGI Symbol;Acc:MGI:3582693]
14. Tmed3 ENSMUSG00000032353 1199 0.942 - 0.942 - - - - transmembrane p24 trafficking protein 3 [Source:MGI Symbol;Acc:MGI:1913361]
15. Pnp ENSMUSG00000115338 3740 0.938 - 0.938 - - - - purine-nucleoside phosphorylase [Source:MGI Symbol;Acc:MGI:97365]
16. Fut8 ENSMUSG00000021065 1066 0.935 - - - - 0.935 - fucosyltransferase 8 [Source:MGI Symbol;Acc:MGI:1858901]
17. Ppp1r11 ENSMUSG00000036398 2733 0.934 - 0.934 - - - - protein phosphatase 1, regulatory inhibitor subunit 11 [Source:MGI Symbol;Acc:MGI:1923747]
18. Thoc7 ENSMUSG00000053453 1165 0.933 - - - - 0.933 - THO complex 7 [Source:MGI Symbol;Acc:MGI:1913481]
19. Xiap ENSMUSG00000025860 3219 0.932 - 0.932 - - - - X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]
20. Nrbp1 ENSMUSG00000029148 2373 0.93 - - - - 0.930 - nuclear receptor binding protein 1 [Source:MGI Symbol;Acc:MGI:2183436]
21. Cbx5 ENSMUSG00000009575 10784 0.929 - 0.929 - - - - chromobox 5 [Source:MGI Symbol;Acc:MGI:109372]
22. Ccnb1 ENSMUSG00000041431 10096 0.929 - 0.929 - - - - cyclin B1 [Source:MGI Symbol;Acc:MGI:88302]
23. Gbas 3724 0.927 - 0.927 - - - - glioblastoma amplified sequence, transcript variant X3
24. Pno1 ENSMUSG00000020116 5621 0.922 - 0.922 - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
25. Nhsl2 ENSMUSG00000079481 3217 0.92 - 0.920 - - - - NHS-like 2 [Source:MGI Symbol;Acc:MGI:3645090]
26. Sox21 ENSMUSG00000061517 464 0.919 - - - - 0.919 - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
27. Insm1 ENSMUSG00000068154 480 0.918 - - - - 0.918 - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
28. Gm4987 ENSMUSG00000063816 2295 0.918 - 0.918 - - - - predicted gene 4987 [Source:MGI Symbol;Acc:MGI:3647751]
29. Ttf1 ENSMUSG00000026803 1251 0.915 - - - - 0.915 - transcription termination factor, RNA polymerase I [Source:MGI Symbol;Acc:MGI:105044]
30. Ncapg ENSMUSG00000015880 1727 0.915 - - - - 0.915 - non-SMC condensin I complex, subunit G [Source:MGI Symbol;Acc:MGI:1930197]
31. Ap1g1 ENSMUSG00000031731 3851 0.914 - 0.914 - - - - adaptor protein complex AP-1, gamma 1 subunit [Source:MGI Symbol;Acc:MGI:101919]
32. Atf2 ENSMUSG00000027104 8295 0.912 - 0.912 - - - - activating transcription factor 2 [Source:MGI Symbol;Acc:MGI:109349]
33. Mapk8 ENSMUSG00000021936 3875 0.91 - 0.910 - - - - mitogen-activated protein kinase 8 [Source:MGI Symbol;Acc:MGI:1346861]
34. Setd7 ENSMUSG00000037111 1899 0.908 - - - - 0.908 - SET domain containing (lysine methyltransferase) 7 [Source:MGI Symbol;Acc:MGI:1920501]
35. Gnai3 ENSMUSG00000000001 5474 0.908 - 0.908 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting 3 [Source:MGI Symbol;Acc:MGI:95773]
36. Btbd9 ENSMUSG00000062202 1289 0.905 - - - - 0.905 - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
37. Pfdn5 ENSMUSG00000001289 5177 0.905 - 0.905 - - - - prefoldin 5 [Source:MGI Symbol;Acc:MGI:1928753]
38. Slc31a1 ENSMUSG00000066150 1810 0.904 - - - - 0.904 - solute carrier family 31, member 1 [Source:MGI Symbol;Acc:MGI:1333843]
39. Cops6 ENSMUSG00000019494 6180 0.898 - 0.898 - - - - COP9 signalosome subunit 6 [Source:MGI Symbol;Acc:MGI:1349439]
40. Arglu1 ENSMUSG00000040459 6057 0.895 - 0.895 - - - - arginine and glutamate rich 1 [Source:MGI Symbol;Acc:MGI:2442985]
41. Ssr2 ENSMUSG00000041355 4002 0.893 - - - - 0.893 - signal sequence receptor, beta [Source:MGI Symbol;Acc:MGI:1913506]
42. Clcn5 ENSMUSG00000004317 3166 0.893 - 0.893 - - - - chloride channel, voltage-sensitive 5 [Source:MGI Symbol;Acc:MGI:99486]
43. Ylpm1 ENSMUSG00000021244 4313 0.893 - 0.893 - - - - YLP motif containing 1 [Source:MGI Symbol;Acc:MGI:1926195]
44. Rbmxl1 ENSMUSG00000037070 8147 0.885 - 0.885 - - - - RNA binding motif protein, X-linked like-1 [Source:MGI Symbol;Acc:MGI:1343045]
45. Pdia5 ENSMUSG00000022844 1610 0.885 - 0.885 - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
46. Plagl2 ENSMUSG00000051413 1876 0.885 - - - - 0.885 - pleiomorphic adenoma gene-like 2 [Source:MGI Symbol;Acc:MGI:1933165]
47. Endov ENSMUSG00000039850 3015 0.883 - 0.883 - - - - endonuclease V [Source:MGI Symbol;Acc:MGI:2444688]
48. Kxd1 ENSMUSG00000055553 1368 0.882 - 0.882 - - - - KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI:1922870]
49. Zfp511 ENSMUSG00000025470 527 0.88 - 0.880 - - - - zinc finger protein 511 [Source:MGI Symbol;Acc:MGI:1917002]
50. Zbtb8os ENSMUSG00000057572 1389 0.88 - 0.880 - - - - zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356]
51. Bdp1 ENSMUSG00000049658 1860 0.879 - - - - 0.879 - B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:MGI Symbol;Acc:MGI:1347077]
52. Nlrc3 ENSMUSG00000049871 675 0.879 - 0.879 - - - - NLR family, CARD domain containing 3 [Source:MGI Symbol;Acc:MGI:2444070]
53. Aftph ENSMUSG00000049659 672 0.878 - 0.878 - - - - aftiphilin [Source:MGI Symbol;Acc:MGI:1923012]
54. Gng5 ENSMUSG00000068523 1998 0.878 - 0.878 - - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:MGI Symbol;Acc:MGI:109164]
55. Katnal2 ENSMUSG00000025420 261 0.878 - 0.878 - - - - katanin p60 subunit A-like 2 [Source:MGI Symbol;Acc:MGI:1924234]
56. Tlr3 ENSMUSG00000031639 152 0.878 - 0.878 - - - - toll-like receptor 3 [Source:MGI Symbol;Acc:MGI:2156367]
57. Fam83d ENSMUSG00000027654 1788 0.878 - - - - 0.878 - family with sequence similarity 83, member D [Source:MGI Symbol;Acc:MGI:1919128]
58. Scn8a ENSMUSG00000023033 445 0.878 - 0.878 - - - - sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
59. Lpar6 ENSMUSG00000033446 911 0.877 - 0.877 - - - - lysophosphatidic acid receptor 6 [Source:MGI Symbol;Acc:MGI:1914418]
60. Snca ENSMUSG00000025889 420 0.877 - 0.877 - - - - synuclein, alpha [Source:MGI Symbol;Acc:MGI:1277151]
61. Cfp ENSMUSG00000001128 267 0.877 - 0.877 - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
62. Dus3l ENSMUSG00000007603 1071 0.877 - 0.877 - - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2147092]
63. Zfp202 ENSMUSG00000025602 368 0.877 - 0.877 - - - - zinc finger protein 202 [Source:MGI Symbol;Acc:MGI:1933401]
64. Nucb1 ENSMUSG00000030824 3747 0.877 - 0.877 - - - - nucleobindin 1 [Source:MGI Symbol;Acc:MGI:97388]
65. Ankhd1 ENSMUSG00000024483 2807 0.877 - 0.877 - - - - ankyrin repeat and KH domain containing 1 [Source:MGI Symbol;Acc:MGI:1921733]
66. Ints7 ENSMUSG00000037461 1790 0.876 - - - - 0.876 - integrator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1924315]
67. Tmem107 ENSMUSG00000020895 490 0.876 - 0.876 - - - - transmembrane protein 107 [Source:MGI Symbol;Acc:MGI:1914160]
68. Gps2 ENSMUSG00000023170 10416 0.876 - 0.876 - - - - G protein pathway suppressor 2 [Source:MGI Symbol;Acc:MGI:1891751]
69. Foxj2 ENSMUSG00000003154 307 0.876 - 0.876 - - - - forkhead box J2 [Source:MGI Symbol;Acc:MGI:1926805]
70. Akt3 ENSMUSG00000019699 1570 0.875 - 0.875 - - - - thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
71. Bcl9 ENSMUSG00000038256 4966 0.875 - 0.875 - - - - B cell CLL/lymphoma 9 [Source:MGI Symbol;Acc:MGI:1924828]
72. Gne ENSMUSG00000028479 439 0.875 - 0.875 - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:MGI Symbol;Acc:MGI:1354951]
73. Ndufaf4 ENSMUSG00000028261 2535 0.875 - - - - 0.875 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:MGI Symbol;Acc:MGI:1915743]
74. Kif23 ENSMUSG00000032254 3411 0.875 - 0.875 - - - - kinesin family member 23 [Source:MGI Symbol;Acc:MGI:1919069]
75. Gm25190 ENSMUSG00000093404 417 0.874 - 0.874 - - - - predicted gene, 25190 [Source:MGI Symbol;Acc:MGI:5454967]
76. Itprip 468 0.874 - 0.874 - - - - inositol 1,4,5-triphosphate receptor interacting protein, transcript variant X2
77. Fam172a ENSMUSG00000064138 1125 0.874 - 0.874 - - - - family with sequence similarity 172, member A [Source:MGI Symbol;Acc:MGI:1915925]
78. Eral1 ENSMUSG00000020832 1059 0.874 - 0.874 - - - - Era (G-protein)-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1889295]
79. Ccdc14 ENSMUSG00000022833 847 0.873 - 0.873 - - - - coiled-coil domain containing 14 [Source:MGI Symbol;Acc:MGI:2443448]
80. Fdx1l ENSMUSG00000079677 1163 0.873 - 0.873 - - - - ferredoxin 1-like [Source:MGI Symbol;Acc:MGI:1915415]
81. Hoxb5 ENSMUSG00000038700 2439 0.872 - - - - 0.872 - homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
82. Cacna1h ENSMUSG00000024112 564 0.872 - 0.872 - - - - calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:MGI Symbol;Acc:MGI:1928842]
83. Tmem230 ENSMUSG00000027341 995 0.872 - 0.872 - - - - transmembrane protein 230 [Source:MGI Symbol;Acc:MGI:1917862]
84. Hspb1 ENSMUSG00000004951 1136 0.871 - 0.871 - - - - heat shock protein 1 [Source:MGI Symbol;Acc:MGI:96240]
85. Msl2 ENSMUSG00000066415 3356 0.871 - 0.871 - - - - MSL complex subunit 2 [Source:MGI Symbol;Acc:MGI:1925103]
86. Trim56 ENSMUSG00000043279 682 0.871 - 0.871 - - - - tripartite motif-containing 56 [Source:MGI Symbol;Acc:MGI:2685298]
87. Rad18 ENSMUSG00000030254 1472 0.871 - 0.871 - - - - RAD18 E3 ubiquitin protein ligase [Source:MGI Symbol;Acc:MGI:1890476]
88. Ppapdc1b Ppapdc1b 807 0.871 - 0.871 - - - -
89. Kcnq5 ENSMUSG00000028033 573 0.871 - 0.871 - - - - potassium voltage-gated channel, subfamily Q, member 5 [Source:MGI Symbol;Acc:MGI:1924937]
90. Fbxl3 ENSMUSG00000022124 1375 0.871 - 0.871 - - - - F-box and leucine-rich repeat protein 3 [Source:MGI Symbol;Acc:MGI:1354702]
91. Mlxip ENSMUSG00000038342 1323 0.87 - 0.870 - - - - MLX interacting protein [Source:MGI Symbol;Acc:MGI:2141183]
92. Vps33a ENSMUSG00000029434 711 0.87 - 0.870 - - - - VPS33A CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1924823]
93. Sft2d3 ENSMUSG00000044982 847 0.87 - 0.870 - - - - SFT2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1914408]
94. Efnb2 ENSMUSG00000001300 2217 0.87 - - - - 0.870 - ephrin B2 [Source:MGI Symbol;Acc:MGI:105097]
95. Pms2 ENSMUSG00000079109 883 0.869 - 0.869 - - - - PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]
96. Polb ENSMUSG00000031536 1200 0.869 - 0.869 - - - - polymerase (DNA directed), beta [Source:MGI Symbol;Acc:MGI:97740]
97. Brms1l ENSMUSG00000012076 1022 0.869 - 0.869 - - - - breast cancer metastasis-suppressor 1-like [Source:MGI Symbol;Acc:MGI:1196337]
98. Lztr1 ENSMUSG00000022761 1984 0.868 - 0.868 - - - - leucine-zipper-like transcriptional regulator, 1 [Source:MGI Symbol;Acc:MGI:1914113]
99. Osbpl1a ENSMUSG00000044252 1204 0.868 - 0.868 - - - - oxysterol binding protein-like 1A [Source:MGI Symbol;Acc:MGI:1927551]
100. Tanc2 ENSMUSG00000053580 1154 0.867 - 0.867 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:MGI Symbol;Acc:MGI:2444121]

There are 511 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA