Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Prpf4

Gene Name Gene ID Reads Annotation
Prpf4 ENSMUSG00000066148 2785 pre-mRNA processing factor 4 [Source:MGI Symbol;Acc:MGI:1917302]







Genes with expression patterns similar to Prpf4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prpf4 ENSMUSG00000066148 2785 6 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 4 [Source:MGI Symbol;Acc:MGI:1917302]
2. Limd2 ENSMUSG00000040699 4400 1.555 0.841 - - - - 0.714 LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:1915053]
3. Sel1l ENSMUSG00000020964 4494 0.972 0.972 - - - - - sel-1 suppressor of lin-12-like (C. elegans) [Source:MGI Symbol;Acc:MGI:1329016]
4. Tprgl ENSMUSG00000029030 2649 0.963 0.963 - - - - - transformation related protein 63 regulated like [Source:MGI Symbol;Acc:MGI:1915058]
5. Ndufb7 ENSMUSG00000033938 3172 0.959 0.959 - - - - - NADH:ubiquinone oxidoreductase subunit B7 [Source:MGI Symbol;Acc:MGI:1914166]
6. Hspe1-ps2 ENSMUSG00000049246 2713 0.953 0.953 - - - - - heat shock protein 1 (chaperonin 10), pseudogene 2 [Source:MGI Symbol;Acc:MGI:1935162]
7. Ly6e ENSMUSG00000022587 2572 0.928 0.928 - - - - - lymphocyte antigen 6 complex, locus E [Source:MGI Symbol;Acc:MGI:106651]
8. Tgfbr3 ENSMUSG00000029287 1818 0.927 - 0.927 - - - - transforming growth factor, beta receptor III [Source:MGI Symbol;Acc:MGI:104637]
9. Erdr1 17201 0.914 0.914 - - - - - erythroid differentiation regulator 1, transcript variant 1, non-coding
10. Trim71 ENSMUSG00000079259 1323 0.914 0.914 - - - - - tripartite motif-containing 71 [Source:MGI Symbol;Acc:MGI:2685973]
11. Fxr2 ENSMUSG00000018765 1650 0.913 0.913 - - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
12. Arrb1 ENSMUSG00000018909 902 0.913 0.913 - - - - - arrestin, beta 1 [Source:MGI Symbol;Acc:MGI:99473]
13. Trim62 ENSMUSG00000041000 867 0.913 0.913 - - - - - tripartite motif-containing 62 [Source:MGI Symbol;Acc:MGI:1914775]
14. Fahd1 ENSMUSG00000045316 533 0.912 0.912 - - - - - fumarylacetoacetate hydrolase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915886]
15. Kcnmb4 ENSMUSG00000054934 1522 0.912 0.912 - - - - - potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
16. Rsbn1 ENSMUSG00000044098 1083 0.912 0.912 - - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
17. 2610021A01Rik ENSMUSG00000091474 463 0.912 0.912 - - - - - RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
18. Zfp943 ENSMUSG00000053347 592 0.911 0.911 - - - - - zinc finger prtoein 943 [Source:MGI Symbol;Acc:MGI:1921920]
19. Usp2 ENSMUSG00000032010 525 0.911 0.911 - - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
20. Map4k1 ENSMUSG00000037337 434 0.911 0.911 - - - - - mitogen-activated protein kinase kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346882]
21. Pi4k2b ENSMUSG00000029186 403 0.911 0.911 - - - - - phosphatidylinositol 4-kinase type 2 beta [Source:MGI Symbol;Acc:MGI:1914323]
22. Gm20605 ENSMUSG00000029720 375 0.911 0.911 - - - - - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
23. Jakmip2 ENSMUSG00000024502 742 0.911 0.911 - - - - - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
24. Slc7a5 ENSMUSG00000040010 313 0.911 0.911 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 [Source:MGI Symbol;Acc:MGI:1298205]
25. Kifc5b ENSMUSG00000024301 269 0.911 0.911 - - - - - kinesin family member C5B [Source:MGI Symbol;Acc:MGI:2137414]
26. Nap1l5 ENSMUSG00000055430 301 0.911 0.911 - - - - - nucleosome assembly protein 1-like 5 [Source:MGI Symbol;Acc:MGI:1923555]
27. Chrna4 ENSMUSG00000027577 941 0.911 0.911 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
28. Sssca1 ENSMUSG00000079478 1411 0.911 0.911 - - - - - Sjogren syndrome/scleroderma autoantigen 1 [Source:MGI Symbol;Acc:MGI:1913482]
29. Etv4 ENSMUSG00000017724 232 0.911 0.911 - - - - - ets variant 4 [Source:MGI Symbol;Acc:MGI:99423]
30. Zc3h8 ENSMUSG00000027387 363 0.911 0.911 - - - - - zinc finger CCCH type containing 8 [Source:MGI Symbol;Acc:MGI:1930128]
31. Kremen1 ENSMUSG00000020393 424 0.911 0.911 - - - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
32. Polr3c ENSMUSG00000028099 1591 0.911 0.911 - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:1921664]
33. Dnal1 ENSMUSG00000042523 458 0.91 0.910 - - - - - dynein, axonemal, light chain 1 [Source:MGI Symbol;Acc:MGI:1921462]
34. Gpcpd1 ENSMUSG00000027346 1151 0.91 0.910 - - - - - glycerophosphocholine phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:104898]
35. Cbr1 ENSMUSG00000051483 2117 0.909 0.909 - - - - - carbonyl reductase 1 [Source:MGI Symbol;Acc:MGI:88284]
36. Rtfdc1 1259 0.909 0.909 - - - - - replication termination factor 2 domain containing 1
37. Etf1 ENSMUSG00000024360 5755 0.909 0.909 - - - - - eukaryotic translation termination factor 1 [Source:MGI Symbol;Acc:MGI:2385071]
38. Atf6 ENSMUSG00000026663 934 0.909 0.909 - - - - - activating transcription factor 6 [Source:MGI Symbol;Acc:MGI:1926157]
39. Zfp830 ENSMUSG00000046010 712 0.909 0.909 - - - - - zinc finger protein 830 [Source:MGI Symbol;Acc:MGI:1914233]
40. Cdyl ENSMUSG00000059288 1021 0.909 0.909 - - - - - chromodomain protein, Y chromosome-like [Source:MGI Symbol;Acc:MGI:1339956]
41. Clasrp ENSMUSG00000061028 843 0.909 0.909 - - - - - CLK4-associating serine/arginine rich protein [Source:MGI Symbol;Acc:MGI:1855695]
42. Prkdc ENSMUSG00000022672 742 0.909 0.909 - - - - - protein kinase, DNA activated, catalytic polypeptide [Source:MGI Symbol;Acc:MGI:104779]
43. Oser1 ENSMUSG00000035399 1702 0.909 0.909 - - - - - oxidative stress responsive serine rich 1 [Source:MGI Symbol;Acc:MGI:1913930]
44. Shisa5 ENSMUSG00000025647 1562 0.908 0.908 - - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
45. Mastl ENSMUSG00000026779 843 0.908 0.908 - - - - - microtubule associated serine/threonine kinase-like [Source:MGI Symbol;Acc:MGI:1914371]
46. Fam20b ENSMUSG00000033557 1380 0.908 0.908 - - - - - family with sequence similarity 20, member B [Source:MGI Symbol;Acc:MGI:2443990]
47. Zfp820 ENSMUSG00000069743 854 0.908 0.908 - - - - - zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
48. Fam220a ENSMUSG00000083012 1193 0.908 0.908 - - - - - family with sequence similarity 220, member A [Source:MGI Symbol;Acc:MGI:1914488]
49. Dmtf1 ENSMUSG00000042508 914 0.907 0.907 - - - - - cyclin D binding myb-like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344415]
50. Bcam ENSMUSG00000002980 1395 0.907 0.907 - - - - - basal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1929940]
51. Thoc6 ENSMUSG00000041319 1276 0.907 0.907 - - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
52. Golph3 ENSMUSG00000022200 1780 0.907 0.907 - - - - - golgi phosphoprotein 3 [Source:MGI Symbol;Acc:MGI:1913879]
53. Gm8213 ENSMUSG00000082474 751 0.907 0.907 - - - - - predicted pseudogene 8213 [Source:MGI Symbol;Acc:MGI:3643597]
54. Chtf8 ENSMUSG00000046691 938 0.907 0.907 - - - - - CTF8, chromosome transmission fidelity factor 8 [Source:MGI Symbol;Acc:MGI:2443370]
55. Ppp2r3a ENSMUSG00000043154 1840 0.906 0.906 - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:MGI Symbol;Acc:MGI:2442104]
56. Cdc25b ENSMUSG00000027330 1004 0.905 0.905 - - - - - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
57. Ap1s1 ENSMUSG00000004849 1481 0.905 0.905 - - - - - adaptor protein complex AP-1, sigma 1 [Source:MGI Symbol;Acc:MGI:1098244]
58. Sall1 ENSMUSG00000031665 769 0.905 0.905 - - - - - spalt like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1889585]
59. Heatr3 ENSMUSG00000031657 1306 0.905 0.905 - - - - - HEAT repeat containing 3 [Source:MGI Symbol;Acc:MGI:2444491]
60. Nhs ENSMUSG00000059493 1580 0.904 0.904 - - - - - NHS actin remodeling regulator [Source:MGI Symbol;Acc:MGI:2684894]
61. Phf21a ENSMUSG00000058318 5016 0.904 0.904 - - - - - PHD finger protein 21A [Source:MGI Symbol;Acc:MGI:2384756]
62. Guk1 ENSMUSG00000020444 1427 0.904 0.904 - - - - - guanylate kinase 1 [Source:MGI Symbol;Acc:MGI:95871]
63. Impdh1 ENSMUSG00000003500 1615 0.904 0.904 - - - - - inosine monophosphate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:96567]
64. Pias2 ENSMUSG00000025423 2581 0.904 0.904 - - - - - protein inhibitor of activated STAT 2 [Source:MGI Symbol;Acc:MGI:1096566]
65. Zfp334 ENSMUSG00000017667 3163 0.904 0.904 - - - - - zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
66. Nt5c3 ENSMUSG00000029780 2379 0.904 0.904 - - - - - 5'-nucleotidase, cytosolic III [Source:MGI Symbol;Acc:MGI:1927186]
67. Gprasp2 ENSMUSG00000072966 2238 0.904 0.904 - - - - - G protein-coupled receptor associated sorting protein 2 [Source:MGI Symbol;Acc:MGI:2442071]
68. Kif3a ENSMUSG00000018395 1688 0.903 0.903 - - - - - kinesin family member 3A [Source:MGI Symbol;Acc:MGI:107689]
69. Nudcd1 ENSMUSG00000038736 2406 0.903 0.903 - - - - - NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679]
70. Cul4b ENSMUSG00000031095 1334 0.903 0.903 - - - - - cullin 4B [Source:MGI Symbol;Acc:MGI:1919834]
71. Twsg1 ENSMUSG00000024098 2302 0.903 0.903 - - - - - twisted gastrulation BMP signaling modulator 1 [Source:MGI Symbol;Acc:MGI:2137520]
72. Ndufaf2 ENSMUSG00000068184 1600 0.902 0.902 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
73. Grm4 ENSMUSG00000063239 430 0.902 0.902 - - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
74. Ss18 ENSMUSG00000037013 2742 0.901 0.901 - - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
75. Ap2s1 ENSMUSG00000008036 3268 0.899 0.899 - - - - - adaptor-related protein complex 2, sigma 1 subunit [Source:MGI Symbol;Acc:MGI:2141861]
76. Dbnl ENSMUSG00000020476 1845 0.899 0.899 - - - - - drebrin-like [Source:MGI Symbol;Acc:MGI:700006]
77. Lyrm5 571 0.898 0.898 - - - - - LYR motif containing 5, transcript variant X4
78. Erp29 ENSMUSG00000029616 2933 0.898 0.898 - - - - - endoplasmic reticulum protein 29 [Source:MGI Symbol;Acc:MGI:1914647]
79. Mtmr6 ENSMUSG00000021987 2727 0.898 0.898 - - - - - myotubularin related protein 6 [Source:MGI Symbol;Acc:MGI:2145637]
80. Med11 ENSMUSG00000018923 1869 0.897 0.897 - - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
81. Ska3 ENSMUSG00000021965 1467 0.896 - 0.896 - - - - spindle and kinetochore associated complex subunit 3 [Source:MGI Symbol;Acc:MGI:3041235]
82. Pkib ENSMUSG00000019876 677 0.896 0.896 - - - - - protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
83. Tacc1 ENSMUSG00000065954 1566 0.896 0.896 - - - - - transforming, acidic coiled-coil containing protein 1 [Source:MGI Symbol;Acc:MGI:2443510]
84. Cetn2 ENSMUSG00000031347 1649 0.895 0.895 - - - - - centrin 2 [Source:MGI Symbol;Acc:MGI:1347085]
85. Xaf1 ENSMUSG00000040483 1172 0.895 0.895 - - - - - XIAP associated factor 1 [Source:MGI Symbol;Acc:MGI:3772572]
86. Gm13075 ENSMUSG00000086061 1783 0.894 - 0.894 - - - - predicted gene 13075 [Source:MGI Symbol;Acc:MGI:3651958]
87. Reep4 ENSMUSG00000033589 2187 0.894 0.894 - - - - - receptor accessory protein 4 [Source:MGI Symbol;Acc:MGI:1919799]
88. Pkp4 ENSMUSG00000026991 2294 0.894 0.894 - - - - - plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
89. Glrx3 ENSMUSG00000031068 3221 0.892 0.892 - - - - - glutaredoxin 3 [Source:MGI Symbol;Acc:MGI:1353653]
90. Smu1 ENSMUSG00000028409 4193 0.892 0.892 - - - - - smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1915546]
91. Plagl2 ENSMUSG00000051413 1876 0.891 0.891 - - - - - pleiomorphic adenoma gene-like 2 [Source:MGI Symbol;Acc:MGI:1933165]
92. Cul5 ENSMUSG00000032030 1885 0.888 0.888 - - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
93. Sucla2 ENSMUSG00000022110 2990 0.887 0.887 - - - - - succinate-Coenzyme A ligase, ADP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306775]
94. Myl9 ENSMUSG00000067818 2365 0.887 - 0.887 - - - - myosin, light polypeptide 9, regulatory [Source:MGI Symbol;Acc:MGI:2138915]
95. Sipa1l2 ENSMUSG00000001995 1533 0.886 0.886 - - - - - signal-induced proliferation-associated 1 like 2 [Source:MGI Symbol;Acc:MGI:2676970]
96. Plxna1 ENSMUSG00000030084 4895 0.886 0.886 - - - - - plexin A1 [Source:MGI Symbol;Acc:MGI:107685]
97. Atp5j ENSMUSG00000022890 11717 0.885 0.885 - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F [Source:MGI Symbol;Acc:MGI:107777]
98. Cops8 ENSMUSG00000034432 3968 0.885 0.885 - - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
99. 9130401M01Rik ENSMUSG00000101892, ENSMUSG00000116094 2031 0.885 0.885 - - - - - RIKEN cDNA 9130401M01 gene [Source:MGI Symbol;Acc:MGI:1923008]
100. Cyc1 ENSMUSG00000022551 4794 0.885 0.885 - - - - - cytochrome c-1 [Source:MGI Symbol;Acc:MGI:1913695]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA