Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Prpf38b

Gene Name Gene ID Reads Annotation
Prpf38b ENSMUSG00000027881 5873 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:MGI Symbol;Acc:MGI:1914171]







Genes with expression patterns similar to Prpf38b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prpf38b ENSMUSG00000027881 5873 6 1.000 1.000 1.000 1.000 1.000 1.000 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:MGI Symbol;Acc:MGI:1914171]
2. Trp53bp2 ENSMUSG00000026510 1450 1.63 - - - - 0.764 0.866 transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
3. Sema6d ENSMUSG00000027200 1413 1.571 - - - - 0.716 0.855 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
4. Ndufb6 ENSMUSG00000071014 2988 1.488 - - - - 0.729 0.759 NADH:ubiquinone oxidoreductase subunit B6 [Source:MGI Symbol;Acc:MGI:2684983]
5. Phf12 ENSMUSG00000037791 554 0.924 - - - - - 0.924 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
6. Mcm8 ENSMUSG00000027353 1598 0.921 - - - - - 0.921 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
7. Blmh ENSMUSG00000020840 2762 0.917 - - - - - 0.917 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
8. Dusp2 ENSMUSG00000027368 534 0.917 - - - - - 0.917 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
9. Alkbh4 ENSMUSG00000039754 367 0.916 - - - - - 0.916 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
10. Slc30a5 ENSMUSG00000021629 839 0.915 - - - - - 0.915 solute carrier family 30 (zinc transporter), member 5 [Source:MGI Symbol;Acc:MGI:1916298]
11. Vimp 1184 0.912 - - - - - 0.912 VCP-interacting membrane protein
12. Fancl ENSMUSG00000004018 569 0.912 - - - - - 0.912 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
13. Lhpp ENSMUSG00000030946 365 0.911 - - - - - 0.911 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
14. Zfp259 Zfp259 2259 0.908 - - - - - 0.908
15. 5930412G12Rik ENSMUSG00000072591 503 0.907 - - - - - 0.907 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
16. Homer3 ENSMUSG00000003573 2190 0.907 - - - - - 0.907 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
17. Bcr ENSMUSG00000009681 588 0.907 - - - - - 0.907 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
18. BC026585 1005 0.906 - - - - - 0.906 cDNA sequence BC026585, transcript variant X1
19. Gm15545 ENSMUSG00000087138 252 0.905 - - - - - 0.905 predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
20. Il17d ENSMUSG00000050222 119 0.904 - - - - - 0.904 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
21. Gm14286 ENSMUSG00000087445 166 0.904 - - - - - 0.904 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
22. Stbd1 ENSMUSG00000047963 377 0.903 - - - - - 0.903 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
23. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.903 - - - - - 0.903 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
24. Dtd1 ENSMUSG00000027430 447 0.903 - - - - - 0.903 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
25. Gm10307 ENSMUSG00000101093 159 0.903 - - - - - 0.903 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
26. Gm24451 ENSMUSG00000065287 57 0.903 - - - - - 0.903 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
27. Phf19 ENSMUSG00000026873 83 0.903 - - - - - 0.903 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
28. Hddc3 ENSMUSG00000030532 213 0.902 - - - - - 0.902 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
29. Rhbdf1 ENSMUSG00000020282 1113 0.902 - - - - - 0.902 rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
30. Atp6ap1 ENSMUSG00000019087 614 0.902 - - - - - 0.902 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
31. Hes3 ENSMUSG00000028946 73 0.902 - - - - - 0.902 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
32. Gm13910 ENSMUSG00000063684 126 0.902 - - - - - 0.902 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
33. Amd1 ENSMUSG00000075232 1041 0.902 - - - - - 0.902 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
34. Sh3rf2 ENSMUSG00000057719 60 0.901 - - - - - 0.901 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
35. Fam131a ENSMUSG00000050821 113 0.901 - - - - - 0.901 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
36. Paxbp1 ENSMUSG00000022974 322 0.9 - - - - - 0.900 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
37. Vps45 ENSMUSG00000015747 406 0.9 - - - - - 0.900 vacuolar protein sorting 45 [Source:MGI Symbol;Acc:MGI:891965]
38. Mrpl37 ENSMUSG00000028622 2555 0.899 - - - - - 0.899 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
39. Pfkfb2 ENSMUSG00000026409 480 0.899 - - - - - 0.899 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
40. Gpr108 ENSMUSG00000005823 539 0.899 - - - - - 0.899 G protein-coupled receptor 108 [Source:MGI Symbol;Acc:MGI:1925558]
41. Ufsp1 ENSMUSG00000051502 251 0.898 - - - - - 0.898 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
42. Pik3c2b ENSMUSG00000026447 424 0.898 - - - - - 0.898 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
43. Cish ENSMUSG00000032578 239 0.897 - - - - - 0.897 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
44. Htr1b ENSMUSG00000049511 77 0.897 - - - - - 0.897 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
45. Hbb-bs ENSMUSG00000052305 2551 0.896 - - - - - 0.896 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
46. Acsl6 ENSMUSG00000020333 249 0.896 - - - - - 0.896 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
47. Pcdha2 ENSMUSG00000104148 246 0.896 - - - - - 0.896 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
48. Ppt2 ENSMUSG00000015474 321 0.895 - - - - - 0.895 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
49. Lgr5 ENSMUSG00000020140 516 0.895 - - - - - 0.895 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
50. Gm13476 Gm13476 165 0.895 - - - - - 0.895
51. Gtf2f2 ENSMUSG00000067995 1487 0.894 - - - - - 0.894 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
52. Ostm1 ENSMUSG00000038280 208 0.893 - - - - - 0.893 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
53. Tubb4b ENSMUSG00000036752 6429 0.893 - - - - - 0.893 tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]
54. Zzef1 ENSMUSG00000055670 953 0.893 - - - - - 0.893 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
55. Trdmt1 ENSMUSG00000026723 391 0.892 - - - - - 0.892 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
56. 9130023H24Rik ENSMUSG00000062944 258 0.891 - - - - - 0.891 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
57. Kif13a ENSMUSG00000021375 1229 0.891 - - - - - 0.891 kinesin family member 13A [Source:MGI Symbol;Acc:MGI:1098264]
58. Stk25 ENSMUSG00000026277 2131 0.89 - - - - - 0.890 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
59. Usp50 ENSMUSG00000027364 304 0.89 - - - - - 0.890 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
60. Pdp2 ENSMUSG00000048371 637 0.89 - - - - - 0.890 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
61. Dfna5 492 0.889 - - - - - 0.889 deafness, autosomal dominant 5 (human), transcript variant X3
62. Ttc7 ENSMUSG00000036918 154 0.889 - - - - - 0.889 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
63. Ftx ENSMUSG00000086370 285 0.889 - - - - - 0.889 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
64. 2310015A10Rik ENSMUSG00000097729 199 0.889 - - - - - 0.889 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
65. 1700052N19Rik 1700052N19Rik 913 0.888 - - - - - 0.888
66. Rrp8 ENSMUSG00000030888 887 0.887 - - - - - 0.887 ribosomal RNA processing 8, methyltransferase, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1914251]
67. Gm10040 ENSMUSG00000058360 476 0.887 - - - - - 0.887 predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
68. Crcp ENSMUSG00000025532 699 0.886 - - - - - 0.886 calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
69. Zfp820 ENSMUSG00000069743 854 0.886 - - - - - 0.886 zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
70. Unc45a ENSMUSG00000030533 852 0.886 - - - - - 0.886 unc-45 myosin chaperone A [Source:MGI Symbol;Acc:MGI:2142246]
71. Rad51ap1 ENSMUSG00000030346 1698 0.885 - - - - - 0.885 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
72. Slc25a53 ENSMUSG00000044348 516 0.884 - - - - - 0.884 solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
73. Fut10 ENSMUSG00000046152 702 0.884 - - - - - 0.884 fucosyltransferase 10 [Source:MGI Symbol;Acc:MGI:2384748]
74. Cep128 ENSMUSG00000061533 494 0.884 - - - - - 0.884 centrosomal protein 128 [Source:MGI Symbol;Acc:MGI:1922466]
75. Ctsc ENSMUSG00000030560 650 0.884 - - - - - 0.884 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
76. Ninl ENSMUSG00000068115 1268 0.883 - - - - - 0.883 ninein-like [Source:MGI Symbol;Acc:MGI:1925427]
77. Agpat4 ENSMUSG00000023827 1455 0.881 - - - - - 0.881 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:MGI Symbol;Acc:MGI:1915512]
78. Aspscr1 ENSMUSG00000025142 694 0.881 - - - - - 0.881 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
79. Trak1 ENSMUSG00000032536 705 0.879 - - - - - 0.879 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
80. Prkaa1 ENSMUSG00000050697 591 0.879 - - - - - 0.879 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
81. Wipi1 ENSMUSG00000041895 3789 0.878 - - - - - 0.878 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
82. Pak4 ENSMUSG00000030602 1778 0.877 - - - - - 0.877 p21 (RAC1) activated kinase 4 [Source:MGI Symbol;Acc:MGI:1917834]
83. Tpp2 ENSMUSG00000041763 3969 0.877 - - - - - 0.877 tripeptidyl peptidase II [Source:MGI Symbol;Acc:MGI:102724]
84. Asah1 ENSMUSG00000031591 856 0.876 - - - - - 0.876 N-acylsphingosine amidohydrolase 1 [Source:MGI Symbol;Acc:MGI:1277124]
85. Adcy1 ENSMUSG00000020431 381 0.876 - - - - - 0.876 adenylate cyclase 1 [Source:MGI Symbol;Acc:MGI:99677]
86. Chst10 ENSMUSG00000026080 667 0.875 - - - - - 0.875 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
87. Recql5 ENSMUSG00000020752 591 0.874 - - - - - 0.874 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
88. Mfhas1 ENSMUSG00000070056 2836 0.874 - - - - - 0.874 malignant fibrous histiocytoma amplified sequence 1 [Source:MGI Symbol;Acc:MGI:1098644]
89. Taz ENSMUSG00000009995 1408 0.874 - - - - - 0.874 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
90. Magi1 ENSMUSG00000045095 959 0.874 - - - - - 0.874 membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:MGI Symbol;Acc:MGI:1203522]
91. Zfp236 ENSMUSG00000041258 968 0.874 - - - - - 0.874 zinc finger protein 236 [Source:MGI Symbol;Acc:MGI:1926950]
92. 2210016L21Rik ENSMUSG00000029559 1199 0.874 - - - - - 0.874 RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
93. Gm21833 ENSMUSG00000094030 652 0.873 - - - - - 0.873 predicted gene, 21833 [Source:MGI Symbol;Acc:MGI:5433997]
94. Mbd1 ENSMUSG00000024561 619 0.873 - - - - - 0.873 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
95. Zbtb6 ENSMUSG00000066798 698 0.873 - - - - - 0.873 zinc finger and BTB domain containing 6 [Source:MGI Symbol;Acc:MGI:2442998]
96. Car2 ENSMUSG00000027562 1176 0.873 - - - - - 0.873 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
97. Ppcs ENSMUSG00000028636 669 0.872 - - - - - 0.872 phosphopantothenoylcysteine synthetase [Source:MGI Symbol;Acc:MGI:1915237]
98. Tmem80 ENSMUSG00000025505 1620 0.872 - - - - - 0.872 transmembrane protein 80 [Source:MGI Symbol;Acc:MGI:1918698]
99. Ccdc91 ENSMUSG00000030301 664 0.872 - - - - - 0.872 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
100. Ppt1 ENSMUSG00000028657 1603 0.872 - - - - - 0.872 palmitoyl-protein thioesterase 1 [Source:MGI Symbol;Acc:MGI:1298204]

There are 326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA