Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Prdm9

Gene Name Gene ID Reads Annotation
Prdm9 ENSMUSG00000051977 134 PR domain containing 9 [Source:MGI Symbol;Acc:MGI:2384854]







Genes with expression patterns similar to Prdm9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prdm9 ENSMUSG00000051977 134 6 1.000 1.000 1.000 1.000 1.000 1.000 PR domain containing 9 [Source:MGI Symbol;Acc:MGI:2384854]
2. Smarca5-ps ENSMUSG00000052912 83 1.734 - - 0.801 - - 0.933 SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]
3. Rasef ENSMUSG00000043003 55 1.719 - - 0.872 - - 0.847 RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
4. Btbd9 ENSMUSG00000062202 1289 1.572 - - 0.736 - - 0.836 BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
5. Wars2 ENSMUSG00000004233 436 1.452 - - 0.729 - - 0.723 tryptophanyl tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1917810]
6. Zfat ENSMUSG00000022335 160 0.941 - - - - - 0.941 zinc finger and AT hook domain containing [Source:MGI Symbol;Acc:MGI:2681865]
7. Gm13423 ENSMUSG00000081648 80 0.937 - - - - - 0.937 predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
8. 6530403H02Rik ENSMUSG00000098097 13 0.935 - - - - - 0.935 RIKEN cDNA 6530403H02 gene [Source:MGI Symbol;Acc:MGI:2444638]
9. Gm11975 ENSMUSG00000084231 70 0.935 - - - - - 0.935 predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
10. Gm15688 ENSMUSG00000089737 18 0.933 - - - - - 0.933 predicted gene 15688 [Source:MGI Symbol;Acc:MGI:3647549]
11. Gm5258 ENSMUSG00000091806 123 0.933 - - - - - 0.933 predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
12. Gm26205 ENSMUSG00000064841 78 0.93 - - - - - 0.930 predicted gene, 26205 [Source:MGI Symbol;Acc:MGI:5455982]
13. AU023871 AU023871 49 0.929 - - - - - 0.929
14. Ptgir ENSMUSG00000043017 22 0.928 - - - - - 0.928 prostaglandin I receptor (IP) [Source:MGI Symbol;Acc:MGI:99535]
15. Gm11033 ENSMUSG00000079011 144 0.927 - - - - - 0.927 predicted gene 11033 [Source:MGI Symbol;Acc:MGI:3779256]
16. Gm13815 ENSMUSG00000080860 47 0.927 - - - - - 0.927 predicted gene 13815 [Source:MGI Symbol;Acc:MGI:3649318]
17. Kcnc2 ENSMUSG00000035681 30 0.926 - - - - - 0.926 potassium voltage gated channel, Shaw-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:96668]
18. Rhno1 ENSMUSG00000048668 97 0.925 - - - - - 0.925 RAD9-HUS1-RAD1 interacting nuclear orphan 1 [Source:MGI Symbol;Acc:MGI:1915315]
19. Gm12577 ENSMUSG00000083834 78 0.925 - - - - - 0.925 predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
20. Mamld1 ENSMUSG00000059401 44 0.921 - - - - - 0.921 mastermind-like domain containing 1 [Source:MGI Symbol;Acc:MGI:3045303]
21. Gfra4 ENSMUSG00000027316 419 0.92 - - - - - 0.920 glial cell line derived neurotrophic factor family receptor alpha 4 [Source:MGI Symbol;Acc:MGI:1341873]
22. Siglec1 ENSMUSG00000027322 95 0.916 - - - - - 0.916 sialic acid binding Ig-like lectin 1, sialoadhesin [Source:MGI Symbol;Acc:MGI:99668]
23. Cyyr1 ENSMUSG00000041134 278 0.916 - - - - - 0.916 cysteine and tyrosine-rich protein 1 [Source:MGI Symbol;Acc:MGI:2152187]
24. C730034F03Rik ENSMUSG00000079242 111 0.915 - - - - - 0.915 RIKEN cDNA C730034F03 gene [Source:MGI Symbol;Acc:MGI:2441921]
25. Ubxn2a ENSMUSG00000020634 544 0.913 - - - - - 0.913 UBX domain protein 2A [Source:MGI Symbol;Acc:MGI:2442310]
26. Ptpro ENSMUSG00000030223 65 0.913 - - - - - 0.913 protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
27. Fbxo27 ENSMUSG00000037463 111 0.913 - - - - - 0.913 F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
28. Parp8 ENSMUSG00000021725 131 0.912 - - - - - 0.912 poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]
29. Kcnq3 ENSMUSG00000056258 146 0.912 - - - - - 0.912 potassium voltage-gated channel, subfamily Q, member 3 [Source:MGI Symbol;Acc:MGI:1336181]
30. Gm11739 ENSMUSG00000086826 102 0.911 - - - - - 0.911 predicted gene 11739 [Source:MGI Symbol;Acc:MGI:3650571]
31. Ptprm ENSMUSG00000033278 279 0.91 - - - - - 0.910 protein tyrosine phosphatase, receptor type, M [Source:MGI Symbol;Acc:MGI:102694]
32. Gm26112 Gm26112 127 0.91 - - 0.910 - - -
33. Nat14 ENSMUSG00000035285 53 0.91 - - - - - 0.910 N-acetyltransferase 14 [Source:MGI Symbol;Acc:MGI:3039561]
34. Pm20d1 ENSMUSG00000042251 59 0.91 - - - - - 0.910 peptidase M20 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442939]
35. Gm16195 ENSMUSG00000087308 86 0.908 - - - - - 0.908 predicted gene 16195 [Source:MGI Symbol;Acc:MGI:3801774]
36. Bcap29 ENSMUSG00000020650 559 0.906 - - - - - 0.906 B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
37. Tsen54 ENSMUSG00000020781 106 0.905 - - - - - 0.905 tRNA splicing endonuclease subunit 54 [Source:MGI Symbol;Acc:MGI:1923515]
38. Ush1c ENSMUSG00000030838 191 0.902 - - - - - 0.902 USH1 protein network component harmonin [Source:MGI Symbol;Acc:MGI:1919338]
39. Ggct ENSMUSG00000002797 199 0.901 - - - - - 0.901 gamma-glutamyl cyclotransferase [Source:MGI Symbol;Acc:MGI:95700]
40. Frrs1l ENSMUSG00000045589 140 0.899 - - - - - 0.899 ferric-chelate reductase 1 like [Source:MGI Symbol;Acc:MGI:2442704]
41. Timm8a1 ENSMUSG00000048007 39 0.899 - - 0.899 - - - translocase of inner mitochondrial membrane 8A1 [Source:MGI Symbol;Acc:MGI:1353433]
42. Slc35d3 ENSMUSG00000050473 84 0.897 - - - - - 0.897 solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
43. Dnase2a ENSMUSG00000003812 117 0.896 - - - - - 0.896 deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
44. Itih5 ENSMUSG00000025780 374 0.894 - - - - - 0.894 inter-alpha (globulin) inhibitor H5 [Source:MGI Symbol;Acc:MGI:1925751]
45. Cpne2 ENSMUSG00000034361 315 0.894 - - - - - 0.894 copine II [Source:MGI Symbol;Acc:MGI:2387578]
46. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.892 - - - - - 0.892 predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
47. Gm13186 ENSMUSG00000081278 857 0.892 - - - - - 0.892 predicted gene 13186 [Source:MGI Symbol;Acc:MGI:3649441]
48. Tenm2 ENSMUSG00000049336 166 0.89 - - - - - 0.890 teneurin transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:1345184]
49. Efhc2 ENSMUSG00000025038 12 0.889 - - 0.889 - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
50. AY074887 ENSMUSG00000044820 41 0.888 - - 0.888 - - - cDNA sequence AY074887 [Source:MGI Symbol;Acc:MGI:3575512]
51. Gemin6 ENSMUSG00000055760 841 0.886 - - - - - 0.886 gem nuclear organelle associated protein 6 [Source:MGI Symbol;Acc:MGI:1914492]
52. Nol3 ENSMUSG00000014776 29 0.886 - - 0.886 - - - nucleolar protein 3 (apoptosis repressor with CARD domain) [Source:MGI Symbol;Acc:MGI:1925938]
53. Gm16185 ENSMUSG00000084911 290 0.884 - - 0.884 - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
54. Kif9 ENSMUSG00000032489 32 0.883 - - 0.883 - - - kinesin family member 9 [Source:MGI Symbol;Acc:MGI:1098237]
55. Ankrd45 ENSMUSG00000044835 23 0.882 - - 0.882 - - - ankyrin repeat domain 45 [Source:MGI Symbol;Acc:MGI:1921094]
56. Chrna7 ENSMUSG00000030525 7 0.881 - - 0.881 - - - cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
57. Ppfia2 ENSMUSG00000053825 97 0.881 - - 0.881 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
58. Lyz2 ENSMUSG00000069516 230 0.88 - - - - - 0.880 lysozyme 2 [Source:MGI Symbol;Acc:MGI:96897]
59. Hist1h1e ENSMUSG00000051627 604 0.88 - - - - - 0.880 histone cluster 1, H1e [Source:MGI Symbol;Acc:MGI:1931527]
60. Pcdh12 ENSMUSG00000024440 218 0.879 - - - - - 0.879 protocadherin 12 [Source:MGI Symbol;Acc:MGI:1855700]
61. Gm14706 ENSMUSG00000083482 26 0.879 - - 0.879 - - - predicted gene 14706 [Source:MGI Symbol;Acc:MGI:3646357]
62. Pou3f4 ENSMUSG00000056854 95 0.879 - - 0.879 - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
63. Gm26861 ENSMUSG00000097009 5 0.878 - - 0.878 - - - predicted gene, 26861 [Source:MGI Symbol;Acc:MGI:5477355]
64. Kcna4 ENSMUSG00000042604 14 0.878 - - 0.878 - - - potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
65. Gm10338 ENSMUSG00000094706 5 0.878 - - 0.878 - - - predicted gene 10338 [Source:MGI Symbol;Acc:MGI:3642676]
66. Gm22748 ENSMUSG00000064427 27 0.878 - - 0.878 - - - predicted gene, 22748 [Source:MGI Symbol;Acc:MGI:5452525]
67. Spcs2-ps ENSMUSG00000081888 7 0.878 - - 0.878 - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
68. A330023F24Rik ENSMUSG00000096929 33 0.877 - - - - - 0.877 RIKEN cDNA A330023F24 gene [Source:MGI Symbol;Acc:MGI:2443958]
69. Gm16540 ENSMUSG00000090005 7 0.877 - - 0.877 - - - predicted gene 16540 [Source:MGI Symbol;Acc:MGI:4414960]
70. Fbll1 ENSMUSG00000051062 57 0.877 - - 0.877 - - - fibrillarin-like 1 [Source:MGI Symbol;Acc:MGI:3034689]
71. 4930512H18Rik ENSMUSG00000086866 25 0.876 - - 0.876 - - - RIKEN cDNA 4930512H18 gene [Source:MGI Symbol;Acc:MGI:1922361]
72. Srpx2 ENSMUSG00000031253 68 0.876 - - - - - 0.876 sushi-repeat-containing protein, X-linked 2 [Source:MGI Symbol;Acc:MGI:1916042]
73. Fam46c 227 0.876 - - - - - 0.876 family with sequence similarity 46, member C, transcript variant X1
74. BC030499 ENSMUSG00000037593 40 0.875 - - 0.875 - - - cDNA sequence BC030499 [Source:MGI Symbol;Acc:MGI:2652869]
75. Gm5321 ENSMUSG00000064231 50 0.873 - - 0.873 - - - predicted gene 5321 [Source:MGI Symbol;Acc:MGI:3645266]
76. Gm26638 ENSMUSG00000097563 57 0.873 - - 0.873 - - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
77. Cidea ENSMUSG00000024526 20 0.873 - - 0.873 - - - cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Source:MGI Symbol;Acc:MGI:1270845]
78. Gbp8 ENSMUSG00000034438 31 0.872 - - 0.872 - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
79. Gale ENSMUSG00000028671 463 0.872 - - - - - 0.872 galactose-4-epimerase, UDP [Source:MGI Symbol;Acc:MGI:1921496]
80. Acvrl1 ENSMUSG00000000530 121 0.871 - - 0.871 - - - activin A receptor, type II-like 1 [Source:MGI Symbol;Acc:MGI:1338946]
81. Cdh6 ENSMUSG00000039385 40 0.871 - - 0.871 - - - cadherin 6 [Source:MGI Symbol;Acc:MGI:107435]
82. Hmcn1 ENSMUSG00000066842 245 0.871 - - - - - 0.871 hemicentin 1 [Source:MGI Symbol;Acc:MGI:2685047]
83. Wif1 ENSMUSG00000020218 141 0.871 - - 0.871 - - - Wnt inhibitory factor 1 [Source:MGI Symbol;Acc:MGI:1344332]
84. Neil1 ENSMUSG00000032298 123 0.87 - - 0.870 - - - nei endonuclease VIII-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1920024]
85. Hacl1 ENSMUSG00000021884 169 0.868 - - - - - 0.868 2-hydroxyacyl-CoA lyase 1 [Source:MGI Symbol;Acc:MGI:1929657]
86. Evx2 ENSMUSG00000001815 45 0.868 - - 0.868 - - - even-skipped homeobox 2 [Source:MGI Symbol;Acc:MGI:95462]
87. Dok3 ENSMUSG00000035711 71 0.868 - - - - - 0.868 docking protein 3 [Source:MGI Symbol;Acc:MGI:1351490]
88. Mospd2 ENSMUSG00000061778 340 0.867 - - - - - 0.867 motile sperm domain containing 2 [Source:MGI Symbol;Acc:MGI:1924013]
89. Cacng5 ENSMUSG00000040373 32 0.866 - - 0.866 - - - calcium channel, voltage-dependent, gamma subunit 5 [Source:MGI Symbol;Acc:MGI:2157946]
90. Gm12468 ENSMUSG00000083985 14 0.866 - - 0.866 - - - predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
91. Zkscan2 ENSMUSG00000030757 53 0.866 - - - - - 0.866 zinc finger with KRAB and SCAN domains 2 [Source:MGI Symbol;Acc:MGI:2444060]
92. Arhgap24 ENSMUSG00000057315 241 0.864 - - - - - 0.864 Rho GTPase activating protein 24 [Source:MGI Symbol;Acc:MGI:1922647]
93. Sec61g ENSMUSG00000078974 132 0.862 - - - - - 0.862 SEC61, gamma subunit [Source:MGI Symbol;Acc:MGI:1202066]
94. Nlgn1 ENSMUSG00000063887 37 0.862 - - 0.862 - - - neuroligin 1 [Source:MGI Symbol;Acc:MGI:2179435]
95. Cd34 ENSMUSG00000016494 921 0.862 - - - - - 0.862 CD34 antigen [Source:MGI Symbol;Acc:MGI:88329]
96. Cdh8 ENSMUSG00000036510 33 0.862 - - 0.862 - - - cadherin 8 [Source:MGI Symbol;Acc:MGI:107434]
97. Rnu3a ENSMUSG00000065870, ENSMUSG00000106147 89 0.86 - - 0.860 - - - U3A small nuclear RNA [Source:MGI Symbol;Acc:MGI:97977]
98. Egfr ENSMUSG00000020122 172 0.859 - - - - - 0.859 epidermal growth factor receptor [Source:MGI Symbol;Acc:MGI:95294]
99. Inpp1 ENSMUSG00000026102 176 0.858 - - 0.858 - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
100. Dusp10 ENSMUSG00000039384 256 0.858 - - - - - 0.858 dual specificity phosphatase 10 [Source:MGI Symbol;Acc:MGI:1927070]

There are 262 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA