Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pnkp

Gene Name Gene ID Reads Annotation
Pnkp ENSMUSG00000002963 1708 polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]







Genes with expression patterns similar to Pnkp

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pnkp ENSMUSG00000002963 1708 6 1.000 1.000 1.000 1.000 1.000 1.000 polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]
2. Mmp14 ENSMUSG00000000957 1636 0.927 - 0.927 - - - - matrix metallopeptidase 14 (membrane-inserted) [Source:MGI Symbol;Acc:MGI:101900]
3. Pds5b ENSMUSG00000034021 3239 0.902 - 0.902 - - - - PDS5 cohesin associated factor B [Source:MGI Symbol;Acc:MGI:2140945]
4. Ndufaf2 ENSMUSG00000068184 1600 0.902 - 0.902 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
5. Impact ENSMUSG00000024423 2315 0.897 - 0.897 - - - - impact, RWD domain protein [Source:MGI Symbol;Acc:MGI:1098233]
6. Hdac3 ENSMUSG00000024454 1491 0.894 - 0.894 - - - - histone deacetylase 3 [Source:MGI Symbol;Acc:MGI:1343091]
7. Armcx1 ENSMUSG00000033460 1862 0.893 - 0.893 - - - - armadillo repeat containing, X-linked 1 [Source:MGI Symbol;Acc:MGI:1925498]
8. Hmgcl ENSMUSG00000028672 2643 0.889 - 0.889 - - - - 3-hydroxy-3-methylglutaryl-Coenzyme A lyase [Source:MGI Symbol;Acc:MGI:96158]
9. Phf14 ENSMUSG00000029629 4107 0.876 - 0.876 - - - - PHD finger protein 14 [Source:MGI Symbol;Acc:MGI:1923539]
10. Plp2 ENSMUSG00000031146 747 0.872 - 0.872 - - - - proteolipid protein 2 [Source:MGI Symbol;Acc:MGI:1298382]
11. Champ1 ENSMUSG00000047710 2118 0.866 - 0.866 - - - - chromosome alignment maintaining phosphoprotein 1 [Source:MGI Symbol;Acc:MGI:1196398]
12. Mrpl54 ENSMUSG00000034932 3136 0.865 - 0.865 - - - - mitochondrial ribosomal protein L54 [Source:MGI Symbol;Acc:MGI:1913297]
13. Aatf ENSMUSG00000018697 1024 0.863 - 0.863 - - - - apoptosis antagonizing transcription factor [Source:MGI Symbol;Acc:MGI:1929608]
14. Gjc1 ENSMUSG00000034520 2554 0.854 - 0.854 - - - - gap junction protein, gamma 1 [Source:MGI Symbol;Acc:MGI:95718]
15. 9430016H08Rik 2854 0.854 - 0.854 - - - - RIKEN cDNA 9430016H08 gene
16. She ENSMUSG00000046280 1769 0.854 - 0.854 - - - - src homology 2 domain-containing transforming protein E [Source:MGI Symbol;Acc:MGI:1099462]
17. Rock2 ENSMUSG00000020580 3652 0.852 - 0.852 - - - - Rho-associated coiled-coil containing protein kinase 2 [Source:MGI Symbol;Acc:MGI:107926]
18. Tpx2 ENSMUSG00000027469 5056 0.851 - 0.851 - - - - TPX2, microtubule-associated [Source:MGI Symbol;Acc:MGI:1919369]
19. C330007P06Rik ENSMUSG00000006423 1932 0.85 - 0.850 - - - - RIKEN cDNA C330007P06 gene [Source:MGI Symbol;Acc:MGI:1924894]
20. Fbxo3 ENSMUSG00000027180 4422 0.842 - 0.842 - - - - F-box protein 3 [Source:MGI Symbol;Acc:MGI:1929084]
21. Pgd ENSMUSG00000028961 3742 0.82 - 0.820 - - - - phosphogluconate dehydrogenase [Source:MGI Symbol;Acc:MGI:97553]
22. Tmem14c ENSMUSG00000021361 2424 0.812 - 0.812 - - - - transmembrane protein 14C [Source:MGI Symbol;Acc:MGI:1913404]
23. Zfp281 ENSMUSG00000041483 3879 0.811 - 0.811 - - - - zinc finger protein 281 [Source:MGI Symbol;Acc:MGI:3029290]
24. Pbk ENSMUSG00000022033 3096 0.804 - 0.804 - - - - PDZ binding kinase [Source:MGI Symbol;Acc:MGI:1289156]
25. Zfp94 ENSMUSG00000074282 203 0.801 - - 0.801 - - - zinc finger protein 94 [Source:MGI Symbol;Acc:MGI:107610]
26. Gm5863 ENSMUSG00000082927 407 0.801 - - 0.801 - - - predicted gene 5863 [Source:MGI Symbol;Acc:MGI:3648580]
27. Cdc123 ENSMUSG00000039128 3775 0.8 - 0.800 - - - - cell division cycle 123 [Source:MGI Symbol;Acc:MGI:2138811]
28. Tmem167 ENSMUSG00000012422 8088 0.787 - 0.787 - - - - transmembrane protein 167 [Source:MGI Symbol;Acc:MGI:1913324]
29. 3110043O21Rik 488 0.786 - - 0.786 - - - RIKEN cDNA 3110043O21 gene, transcript variant X2
30. Ubfd1 ENSMUSG00000030870 5770 0.785 - 0.785 - - - - ubiquitin family domain containing 1 [Source:MGI Symbol;Acc:MGI:107301]
31. Tm7sf3 ENSMUSG00000040234 858 0.784 - - 0.784 - - - transmembrane 7 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914873]
32. Xpo6 ENSMUSG00000000131 3272 0.77 - 0.770 - - - - exportin 6 [Source:MGI Symbol;Acc:MGI:2429950]
33. Bmyc ENSMUSG00000049086 7563 0.766 - 0.766 - - - - brain expressed myelocytomatosis oncogene [Source:MGI Symbol;Acc:MGI:88184]
34. Nbas ENSMUSG00000020576 308 0.763 - - 0.763 - - - neuroblastoma amplified sequence [Source:MGI Symbol;Acc:MGI:1918419]
35. Tmem214 ENSMUSG00000038828 4592 0.762 - 0.762 - - - - transmembrane protein 214 [Source:MGI Symbol;Acc:MGI:1916046]
36. Ube4b ENSMUSG00000028960 7161 0.762 - 0.762 - - - - ubiquitination factor E4B [Source:MGI Symbol;Acc:MGI:1927086]
37. Pdxk ENSMUSG00000032788 1216 0.757 - - 0.757 - - - pyridoxal (pyridoxine, vitamin B6) kinase [Source:MGI Symbol;Acc:MGI:1351869]
38. Trip12 ENSMUSG00000026219 7818 0.757 - 0.757 - - - - thyroid hormone receptor interactor 12 [Source:MGI Symbol;Acc:MGI:1309481]
39. Nap1l2 ENSMUSG00000082229 315 0.755 - - 0.755 - - - nucleosome assembly protein 1-like 2 [Source:MGI Symbol;Acc:MGI:106654]
40. Rad9a ENSMUSG00000024824, ENSMUSG00000097909 403 0.753 - - 0.753 - - - RAD9 checkpoint clamp component A [Source:MGI Symbol;Acc:MGI:1328356]
41. Tulp4 ENSMUSG00000034377 4705 0.752 - 0.752 - - - - tubby like protein 4 [Source:MGI Symbol;Acc:MGI:1916092]
42. Gm14914 ENSMUSG00000084283 50 0.752 - - 0.752 - - - predicted gene 14914 [Source:MGI Symbol;Acc:MGI:3705473]
43. Dph3 ENSMUSG00000021905 2017 0.752 - 0.752 - - - - diphthamine biosynthesis 3 [Source:MGI Symbol;Acc:MGI:1922658]
44. Gm11361 ENSMUSG00000113061 3160 0.752 - 0.752 - - - - predicted pseudogene 11361 [Source:MGI Symbol;Acc:MGI:3649931]
45. Isca2 ENSMUSG00000021241 4922 0.748 - 0.748 - - - - iron-sulfur cluster assembly 2 [Source:MGI Symbol;Acc:MGI:1921566]
46. Anapc13 ENSMUSG00000035048 3163 0.747 - 0.747 - - - - anaphase promoting complex subunit 13 [Source:MGI Symbol;Acc:MGI:1916260]
47. Robo1 ENSMUSG00000022883 3846 0.746 - 0.746 - - - - roundabout guidance receptor 1 [Source:MGI Symbol;Acc:MGI:1274781]
48. Mrm1 ENSMUSG00000018405 141 0.744 - - 0.744 - - - mitochondrial rRNA methyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443470]
49. Stt3b ENSMUSG00000032437 11214 0.741 - 0.741 - - - - STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915542]
50. Ptbp2 ENSMUSG00000028134 3052 0.737 - - 0.737 - - - polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]
51. Blvra ENSMUSG00000001999 342 0.731 - - 0.731 - - - biliverdin reductase A [Source:MGI Symbol;Acc:MGI:88170]
52. Abce1 ENSMUSG00000058355 7969 0.73 - 0.730 - - - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:MGI Symbol;Acc:MGI:1195458]
53. E130317F20Rik ENSMUSG00000091994 253 0.729 - - 0.729 - - - RIKEN cDNA E130317F20 gene [Source:MGI Symbol;Acc:MGI:3041202]
54. 0610007P14Rik 5393 0.729 - - 0.729 - - - RIKEN cDNA 0610007P14 gene, transcript variant X1
55. Hic2 ENSMUSG00000050240 2857 0.726 - - 0.726 - - - hypermethylated in cancer 2 [Source:MGI Symbol;Acc:MGI:1929869]
56. Ss18l1 ENSMUSG00000039086 356 0.725 - - 0.725 - - - SS18, nBAF chromatin remodeling complex subunit like 1 [Source:MGI Symbol;Acc:MGI:2444061]
57. Bmpr1b ENSMUSG00000052430 480 0.72 - - 0.720 - - - bone morphogenetic protein receptor, type 1B [Source:MGI Symbol;Acc:MGI:107191]
58. Stard7 ENSMUSG00000027367 6536 0.719 - 0.719 - - - - START domain containing 7 [Source:MGI Symbol;Acc:MGI:2139090]
59. Cdca3 ENSMUSG00000023505 4570 0.719 - - 0.719 - - - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
60. Rnaseh2c ENSMUSG00000024925 2015 0.719 - - 0.719 - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
61. Gm5070 ENSMUSG00000096177 323 0.715 - - 0.715 - - - predicted gene 5070 [Source:MGI Symbol;Acc:MGI:3643219]
62. Wdr89 ENSMUSG00000045690 12291 0.713 - 0.713 - - - - WD repeat domain 89 [Source:MGI Symbol;Acc:MGI:1919588]
63. Samd14 ENSMUSG00000047181 851 0.71 - 0.710 - - - - sterile alpha motif domain containing 14 [Source:MGI Symbol;Acc:MGI:2384945]
64. 3110052M02Rik 376 0.708 - 0.708 - - - - RIKEN cDNA 3110052M02 gene, transcript variant X10
65. Myadm ENSMUSG00000068566, ENSMUSG00000097829 710 0.708 - 0.708 - - - - myeloid-associated differentiation marker [Source:NCBI gene;Acc:50918]
66. Inpp5a ENSMUSG00000025477 273 0.706 - - 0.706 - - - inositol polyphosphate-5-phosphatase A [Source:MGI Symbol;Acc:MGI:2686961]
67. Coil ENSMUSG00000033983 461 0.704 - - 0.704 - - - coilin [Source:MGI Symbol;Acc:MGI:104842]
68. Gm9790 ENSMUSG00000044330 390 0.704 - 0.704 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
69. Mtfr2 ENSMUSG00000019992 119 0.704 - - 0.704 - - - mitochondrial fission regulator 2 [Source:MGI Symbol;Acc:MGI:1919054]
70. Gsg2 302 0.703 - - 0.703 - - - germ cell-specific gene 2
71. 3632451O06Rik 465 0.702 - 0.702 - - - - RIKEN cDNA 3632451O06 gene, transcript variant X2
72. Ldlr ENSMUSG00000032193 1641 0.702 - - 0.702 - - - low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:96765]
73. Cisd3 ENSMUSG00000078695 472 0.701 - - 0.701 - - - CDGSH iron sulfur domain 3 [Source:MGI Symbol;Acc:MGI:101788]
74. Catsper2 ENSMUSG00000033486 102 0.701 - - 0.701 - - - cation channel, sperm associated 2 [Source:MGI Symbol;Acc:MGI:2387404]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA