Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pitx1

Gene Name Gene ID Reads Annotation
Pitx1 ENSMUSG00000021506 2270 paired-like homeodomain transcription factor 1 [Source:MGI Symbol;Acc:MGI:107374]







Genes with expression patterns similar to Pitx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pitx1 ENSMUSG00000021506 2270 6 1.000 1.000 1.000 1.000 1.000 1.000 paired-like homeodomain transcription factor 1 [Source:MGI Symbol;Acc:MGI:107374]
2. Tac2 ENSMUSG00000025400 746 1.623 - 0.821 0.802 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
3. Gpx3 ENSMUSG00000018339 1590 1.608 - 0.898 0.710 - - - glutathione peroxidase 3 [Source:MGI Symbol;Acc:MGI:105102]
4. Col1a1 ENSMUSG00000001506 38394 1.51 - - 0.806 - - 0.704 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
5. 5730508B09Rik 361 1.457 - 0.734 0.723 - - - RIKEN cDNA 5730508B09 gene
6. Prss35 ENSMUSG00000033491 245 0.945 - 0.945 - - - - protease, serine 35 [Source:MGI Symbol;Acc:MGI:2444800]
7. Chtf18 ENSMUSG00000019214 275 0.862 - - 0.862 - - - CTF18, chromosome transmission fidelity factor 18 [Source:MGI Symbol;Acc:MGI:2384887]
8. Runx2 ENSMUSG00000039153 319 0.856 - - 0.856 - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
9. Pitx2 ENSMUSG00000028023 3658 0.853 - 0.853 - - - - paired-like homeodomain transcription factor 2 [Source:MGI Symbol;Acc:MGI:109340]
10. Kcnk2 ENSMUSG00000037624 670 0.846 - - 0.846 - - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
11. Smtnl2 ENSMUSG00000045667 962 0.845 - - 0.845 - - - smoothelin-like 2 [Source:MGI Symbol;Acc:MGI:2442764]
12. Tacstd2 ENSMUSG00000051397 155 0.843 - - 0.843 - - - tumor-associated calcium signal transducer 2 [Source:MGI Symbol;Acc:MGI:1861606]
13. Emp2 ENSMUSG00000022505 118 0.84 - 0.840 - - - - epithelial membrane protein 2 [Source:MGI Symbol;Acc:MGI:1098726]
14. Zfpm2 ENSMUSG00000022306 343 0.83 - - 0.830 - - - zinc finger protein, multitype 2 [Source:MGI Symbol;Acc:MGI:1334444]
15. Prdm6 ENSMUSG00000069378 328 0.824 - - 0.824 - - - PR domain containing 6 [Source:MGI Symbol;Acc:MGI:2684938]
16. Emp3 ENSMUSG00000040212 1609 0.812 - 0.812 - - - - epithelial membrane protein 3 [Source:MGI Symbol;Acc:MGI:1098729]
17. P4ha2 ENSMUSG00000018906 797 0.811 - - 0.811 - - - procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide [Source:MGI Symbol;Acc:MGI:894286]
18. Gucy1a3 318 0.811 - - 0.811 - - - guanylate cyclase 1, soluble, alpha 3, transcript variant X1
19. Kcnk3 ENSMUSG00000049265 209 0.81 - 0.810 - - - - potassium channel, subfamily K, member 3 [Source:MGI Symbol;Acc:MGI:1100509]
20. Lrrc3b ENSMUSG00000045201 96 0.809 - - 0.809 - - - leucine rich repeat containing 3B [Source:MGI Symbol;Acc:MGI:2384996]
21. Scarf2 ENSMUSG00000012017 2585 0.809 - - 0.809 - - - scavenger receptor class F, member 2 [Source:MGI Symbol;Acc:MGI:1858430]
22. Col5a2 ENSMUSG00000026042 5256 0.805 - 0.805 - - - - collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458]
23. Prrt4 ENSMUSG00000079654 149 0.804 - - 0.804 - - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
24. Ttc38 ENSMUSG00000035944 225 0.803 - 0.803 - - - - tetratricopeptide repeat domain 38 [Source:MGI Symbol;Acc:MGI:2146198]
25. Creb3l1 ENSMUSG00000027230 1172 0.803 - - - - - 0.803 cAMP responsive element binding protein 3-like 1 [Source:MGI Symbol;Acc:MGI:1347062]
26. Tmbim1 ENSMUSG00000006301 297 0.803 - - 0.803 - - - transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
27. Kcnip3 ENSMUSG00000079056 249 0.797 - - 0.797 - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
28. Asgr1 ENSMUSG00000020884 103 0.795 - - 0.795 - - - asialoglycoprotein receptor 1 [Source:MGI Symbol;Acc:MGI:88081]
29. Upp2 ENSMUSG00000026839 138 0.793 - - 0.793 - - - uridine phosphorylase 2 [Source:MGI Symbol;Acc:MGI:1923904]
30. Fam65a 1330 0.793 - - 0.793 - - - family with sequence similarity 65, member A, transcript variant X6
31. Rps27 ENSMUSG00000090733 17 0.789 - - 0.789 - - - ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1888676]
32. Kcnk6 ENSMUSG00000046410 113 0.789 - - 0.789 - - - potassium inwardly-rectifying channel, subfamily K, member 6 [Source:MGI Symbol;Acc:MGI:1891291]
33. Grhl3 ENSMUSG00000037188 211 0.788 - - 0.788 - - - grainyhead like transcription factor 3 [Source:MGI Symbol;Acc:MGI:2655333]
34. Rinl ENSMUSG00000051735 71 0.786 - - 0.786 - - - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
35. Zdhhc1 ENSMUSG00000039199 84 0.785 - 0.785 - - - - zinc finger, DHHC domain containing 1 [Source:MGI Symbol;Acc:MGI:1918046]
36. Cyp4f16 ENSMUSG00000048440 183 0.783 - - 0.783 - - - cytochrome P450, family 4, subfamily f, polypeptide 16 [Source:MGI Symbol;Acc:MGI:1917351]
37. Ralb ENSMUSG00000004451 1130 0.782 - - 0.782 - - - v-ral simian leukemia viral oncogene B [Source:MGI Symbol;Acc:MGI:1927244]
38. Gfi1 ENSMUSG00000029275 21 0.782 - - 0.782 - - - growth factor independent 1 [Source:MGI Symbol;Acc:MGI:103170]
39. Abcg5 ENSMUSG00000040505 25 0.78 - - 0.780 - - - ATP binding cassette subfamily G member 5 [Source:MGI Symbol;Acc:MGI:1351659]
40. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.78 - - 0.780 - - - collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
41. Zfp46 ENSMUSG00000051351 1419 0.78 - - 0.780 - - - zinc finger protein 46 [Source:MGI Symbol;Acc:MGI:99192]
42. Mib2 ENSMUSG00000029060 369 0.779 - - 0.779 - - - mindbomb E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2679684]
43. Commd9 ENSMUSG00000027163 464 0.777 - 0.777 - - - - COMM domain containing 9 [Source:MGI Symbol;Acc:MGI:1923751]
44. Ears2 ENSMUSG00000030871 238 0.776 - - 0.776 - - - glutamyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1914667]
45. Tep1 ENSMUSG00000006281 119 0.775 - 0.775 - - - - telomerase associated protein 1 [Source:MGI Symbol;Acc:MGI:109573]
46. Pwwp2b ENSMUSG00000060260, ENSMUSG00000110798 354 0.771 - - 0.771 - - - PWWP domain containing 2B [Source:MGI Symbol;Acc:MGI:2142008]
47. Plxnb2 ENSMUSG00000036606 2846 0.771 - - 0.771 - - - plexin B2 [Source:MGI Symbol;Acc:MGI:2154239]
48. Parp4 ENSMUSG00000054509 261 0.77 - - 0.770 - - - poly (ADP-ribose) polymerase family, member 4 [Source:MGI Symbol;Acc:MGI:2685589]
49. Postn ENSMUSG00000027750 3911 0.769 - 0.769 - - - - periostin, osteoblast specific factor [Source:MGI Symbol;Acc:MGI:1926321]
50. Smim1 ENSMUSG00000078350 279 0.769 - 0.769 - - - - small integral membrane protein 1 [Source:MGI Symbol;Acc:MGI:1916109]
51. Anxa2 ENSMUSG00000032231 4432 0.766 - - 0.766 - - - annexin A2 [Source:MGI Symbol;Acc:MGI:88246]
52. Cd248 ENSMUSG00000056481 1168 0.766 - 0.766 - - - - CD248 antigen, endosialin [Source:MGI Symbol;Acc:MGI:1917695]
53. 4732491K20Rik ENSMUSG00000097350 92 0.762 - - 0.762 - - - RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]
54. Gm12268 ENSMUSG00000083412 82 0.761 - - 0.761 - - - predicted gene 12268 [Source:MGI Symbol;Acc:MGI:3702435]
55. BC042782 BC042782 63 0.759 - - 0.759 - - -
56. Snx8 ENSMUSG00000029560 535 0.758 - 0.758 - - - - sorting nexin 8 [Source:MGI Symbol;Acc:MGI:2443816]
57. Gm25072 ENSMUSG00000092974 251 0.757 - - 0.757 - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
58. Chst5 ENSMUSG00000031952 39 0.754 - - 0.754 - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 [Source:MGI Symbol;Acc:MGI:1931825]
59. Zpbp ENSMUSG00000020193 26 0.752 - - 0.752 - - - zona pellucida binding protein [Source:MGI Symbol;Acc:MGI:1855701]
60. Glb1l ENSMUSG00000026200 115 0.751 - - 0.751 - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
61. Fbxo4 ENSMUSG00000022184 84 0.749 - - 0.749 - - - F-box protein 4 [Source:MGI Symbol;Acc:MGI:2146220]
62. Fam83e ENSMUSG00000054161 107 0.748 - - 0.748 - - - family with sequence similarity 83, member E [Source:MGI Symbol;Acc:MGI:1921063]
63. Man2a1 ENSMUSG00000024085 1658 0.748 - - - - 0.748 - mannosidase 2, alpha 1 [Source:MGI Symbol;Acc:MGI:104669]
64. Dkk2 ENSMUSG00000028031 697 0.747 - - 0.747 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:MGI Symbol;Acc:MGI:1890663]
65. Svep1 ENSMUSG00000028369 921 0.746 - - 0.746 - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:MGI Symbol;Acc:MGI:1928849]
66. Igsf11 ENSMUSG00000022790 190 0.746 - - 0.746 - - - immunoglobulin superfamily, member 11 [Source:MGI Symbol;Acc:MGI:2388477]
67. Caprin2 ENSMUSG00000030309 884 0.745 - 0.745 - - - - caprin family member 2 [Source:MGI Symbol;Acc:MGI:2448541]
68. Axl ENSMUSG00000002602 3758 0.745 - 0.745 - - - - AXL receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:1347244]
69. Fam84b ENSMUSG00000072568 1349 0.744 - - 0.744 - - - family with sequence similarity 84, member B [Source:MGI Symbol;Acc:MGI:3026924]
70. Odf2l ENSMUSG00000028256 245 0.744 - - 0.744 - - - outer dense fiber of sperm tails 2-like [Source:MGI Symbol;Acc:MGI:1098600]
71. Colec11 ENSMUSG00000036655 47 0.744 - - 0.744 - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
72. Echs1 ENSMUSG00000025465 3845 0.743 - - 0.743 - - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Source:MGI Symbol;Acc:MGI:2136460]
73. Ogg1 ENSMUSG00000030271 242 0.743 - - 0.743 - - - 8-oxoguanine DNA-glycosylase 1 [Source:MGI Symbol;Acc:MGI:1097693]
74. Sfrp1 ENSMUSG00000031548 28698 0.743 - - - - - 0.743 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
75. Neat1 ENSMUSG00000092274 205 0.742 - - 0.742 - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
76. Col5a1 ENSMUSG00000026837 6050 0.742 - 0.742 - - - - collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]
77. Egr1 ENSMUSG00000038418 99 0.741 - 0.741 - - - - early growth response 1 [Source:MGI Symbol;Acc:MGI:95295]
78. Gm15774 ENSMUSG00000085118 153 0.741 - - 0.741 - - - predicted gene 15774 [Source:MGI Symbol;Acc:MGI:3783215]
79. Lamp3 ENSMUSG00000041247 195 0.741 - - 0.741 - - - lysosomal-associated membrane protein 3 [Source:MGI Symbol;Acc:MGI:2441659]
80. Ppp2r2b ENSMUSG00000024500 3425 0.74 - - - 0.740 - - protein phosphatase 2, regulatory subunit B, beta [Source:MGI Symbol;Acc:MGI:1920180]
81. Kbtbd13 ENSMUSG00000054978 79 0.74 - - 0.740 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:MGI Symbol;Acc:MGI:1921742]
82. Gm16070 ENSMUSG00000085125 40 0.739 - - 0.739 - - - predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
83. Gata6 ENSMUSG00000005836 5985 0.738 - - - - - 0.738 GATA binding protein 6 [Source:MGI Symbol;Acc:MGI:107516]
84. Kremen1 ENSMUSG00000020393 424 0.737 - - 0.737 - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
85. Endod1 ENSMUSG00000037419 556 0.737 - - 0.737 - - - endonuclease domain containing 1 [Source:MGI Symbol;Acc:MGI:1919196]
86. Gpr126 Gpr126 318 0.737 - - 0.737 - - -
87. Gm22897 ENSMUSG00000105400, ENSMUSG00000106272 7 0.737 - - 0.737 - - - predicted gene, 22897 [Source:MGI Symbol;Acc:MGI:5452674]
88. Gm21098 Gm21098 9 0.737 - - 0.737 - - -
89. Acsm3 ENSMUSG00000030935 8 0.737 - - 0.737 - - - acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
90. A930001C03Rik ENSMUSG00000087132 15 0.737 - - 0.737 - - - RIKEN cDNA A930001C03 gene [Source:MGI Symbol;Acc:MGI:2441838]
91. Mov10l1 ENSMUSG00000015365 22 0.736 - - 0.736 - - - Moloney leukemia virus 10-like 1 [Source:MGI Symbol;Acc:MGI:1891384]
92. Gm11483 ENSMUSG00000083943 8 0.735 - - 0.735 - - - predicted gene 11483 [Source:MGI Symbol;Acc:MGI:3652237]
93. Mb ENSMUSG00000018893 25 0.735 - - 0.735 - - - myoglobin [Source:MGI Symbol;Acc:MGI:96922]
94. Gabbr2 ENSMUSG00000039809 53 0.734 - - 0.734 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:MGI Symbol;Acc:MGI:2386030]
95. Gm12459 ENSMUSG00000083153 32 0.734 - - 0.734 - - - predicted gene 12459 [Source:MGI Symbol;Acc:MGI:3651071]
96. Pxmp4 ENSMUSG00000000876 1030 0.733 - - 0.733 - - - peroxisomal membrane protein 4 [Source:MGI Symbol;Acc:MGI:1891701]
97. AU015836 ENSMUSG00000081044 36 0.732 - - 0.732 - - - expressed sequence AU015836 [Source:MGI Symbol;Acc:MGI:2147954]
98. Aldh3b2 ENSMUSG00000075296 33 0.732 - - 0.732 - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]
99. Lgals7 ENSMUSG00000053522 36 0.731 - - 0.731 - - - lectin, galactose binding, soluble 7 [Source:MGI Symbol;Acc:MGI:1316742]
100. Gm18294 ENSMUSG00000093416 29 0.731 - - 0.731 - - - predicted gene, 18294 [Source:MGI Symbol;Acc:MGI:5010479]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA